Huntingtin-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0101441 RchiOBHm_Chr5g0023271 |
| rosa_laevigata | RLG00000003196 |
| rosa_multiflora | Rmu_sc0000854.1_g000060 Rmu_sc0002079.1_g000029 Rmu_sc0002416.1_g000019 Rmu_sc0007310.1_g000004 Rmu_sc0011008.1_g000001 Rmu_sc0024464.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00035670 |
| rosa_samantha | Rh1AG220800 Rh2CG152900 Rh3DG314600 Rh6AG050000 Rh6AG411400 Rh7AG053400 Rh7DG427000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 90 |
| AciI | CCGC | 1 cut(s) | 55 |
| AcsI | RAATTY | 1 cut(s) | 299 |
| AgsI | TTSAA | 3 cut(s) | 130, 245, 317 |
| AluBI | AGCT | 4 cut(s) | 41, 194, 207, 350 |
| AluI | AGCT | 4 cut(s) | 41, 194, 207, 350 |
| Alw21I | GWGCWC | 1 cut(s) | 196 |
| Ama87I | CYCGRG | 2 cut(s) | 202, 278 |
| AoxI | GGCC | 1 cut(s) | 387 |
| ApoI | RAATTY | 1 cut(s) | 299 |
| AspS9I | GGNCC | 1 cut(s) | 388 |
| AsuC2I | CCSGG | 2 cut(s) | 279, 280 |
| AvaI | CYCGRG | 2 cut(s) | 202, 278 |
| BanII | GRGCYC | 2 cut(s) | 164, 196 |
| Bbv12I | GWGCWC | 1 cut(s) | 196 |
| BccI | CCATC | 2 cut(s) | 17, 116 |
| BcnI | CCSGG | 2 cut(s) | 279, 280 |
| BfaI | CTAG | 1 cut(s) | 122 |
| Bme1390I | CCNGG | 2 cut(s) | 279, 280 |
| BmeT110I | CYCGRG | 2 cut(s) | 202, 278 |
| BmgT120I | GGNCC | 1 cut(s) | 388 |
| BmiI | GGNNCC | 1 cut(s) | 390 |
| BmrFI | CCNGG | 2 cut(s) | 279, 280 |
| BpuMI | CCSGG | 2 cut(s) | 279, 280 |
| BsaJI | CCNNGG | 2 cut(s) | 278, 279 |
| BseDI | CCNNGG | 2 cut(s) | 278, 279 |
| Bsh1236I | CGCG | 1 cut(s) | 90 |
| BshFI | GGCC | 1 cut(s) | 389 |
| BsiHKAI | GWGCWC | 1 cut(s) | 196 |
| BsiHKCI | CYCGRG | 2 cut(s) | 202, 278 |
| BsiSI | CCGG | 1 cut(s) | 279 |
| BsnI | GGCC | 1 cut(s) | 389 |
| BsoBI | CYCGRG | 2 cut(s) | 202, 278 |
| Bsp1286I | GDGCHC | 2 cut(s) | 164, 196 |
| Bsp143I | GATC | 1 cut(s) | 78 |
| BspACI | CCGC | 1 cut(s) | 55 |
| BspANI | GGCC | 1 cut(s) | 389 |
| BspFNI | CGCG | 1 cut(s) | 90 |
| BspLI | GGNNCC | 1 cut(s) | 390 |
| BssECI | CCNNGG | 2 cut(s) | 278, 279 |
| BssMI | GATC | 1 cut(s) | 78 |
| Bst4CI | ACNGT | 3 cut(s) | 73, 140, 396 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 373 |
| BstC8I | GCNNGC | 2 cut(s) | 209, 213 |
| BstDEI | CTNAG | 1 cut(s) | 22 |
| BstFNI | CGCG | 1 cut(s) | 90 |
| BstKTI | GATC | 1 cut(s) | 81 |
| BstMBI | GATC | 1 cut(s) | 78 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 373 |
| BstSCI | CCNGG | 2 cut(s) | 277, 278 |
| BstUI | CGCG | 1 cut(s) | 90 |
| BsuRI | GGCC | 1 cut(s) | 389 |
| BtgZI | GCGATG | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 1 cut(s) | 145 |
| Cac8I | GCNNGC | 2 cut(s) | 209, 213 |
| Cfr13I | GGNCC | 1 cut(s) | 388 |
| Cfr9I | CCCGGG | 1 cut(s) | 278 |
| CviAII | CATG | 2 cut(s) | 305, 385 |
| DdeI | CTNAG | 1 cut(s) | 22 |
| DpnI | GATC | 1 cut(s) | 80 |
| DpnII | GATC | 1 cut(s) | 78 |
| Ecl136II | GAGCTC | 1 cut(s) | 194 |
| Eco24I | GRGCYC | 2 cut(s) | 164, 196 |
| Eco53kI | GAGCTC | 1 cut(s) | 194 |
| Eco88I | CYCGRG | 2 cut(s) | 202, 278 |
| EcoICRI | GAGCTC | 1 cut(s) | 194 |
| EcoT22I | ATGCAT | 1 cut(s) | 310 |
| EcoT38I | GRGCYC | 2 cut(s) | 164, 196 |
| FaeI | CATG | 2 cut(s) | 308, 388 |
| FaiI | YATR | 7 cut(s) | 44, 116, 253, 306, 357, 365, 386 |
| FatI | CATG | 2 cut(s) | 304, 384 |
| FauI | CCCGC | 1 cut(s) | 48 |
| FriOI | GRGCYC | 2 cut(s) | 164, 196 |
| FspBI | CTAG | 1 cut(s) | 122 |
| HaeIII | GGCC | 1 cut(s) | 389 |
| HapII | CCGG | 1 cut(s) | 279 |
| Hin1II | CATG | 2 cut(s) | 308, 388 |
| HpaII | CCGG | 1 cut(s) | 279 |
| Hpy188I | TCNGA | 1 cut(s) | 347 |
| Hpy188III | TCNNGA | 2 cut(s) | 189, 242 |
| HpyCH4III | ACNGT | 3 cut(s) | 73, 140, 396 |
| HpyCH4V | TGCA | 4 cut(s) | 211, 259, 308, 367 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 373 |
| HpyF3I | CTNAG | 1 cut(s) | 22 |
| Hsp92II | CATG | 2 cut(s) | 308, 388 |
| Kzo9I | GATC | 1 cut(s) | 78 |
| LpnPI | CCDG | 2 cut(s) | 292, 336 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MalI | GATC | 1 cut(s) | 80 |
| MboI | GATC | 1 cut(s) | 78 |
| MboII | GAAGA | 2 cut(s) | 88, 319 |
| MhlI | GDGCHC | 2 cut(s) | 164, 196 |
| MluCI | AATT | 6 cut(s) | 31, 62, 102, 130, 167, 299 |
| MnlI | CCTC | 1 cut(s) | 45 |
| Mph1103I | ATGCAT | 1 cut(s) | 310 |
| MslI | CAYNNNNRTG | 1 cut(s) | 113 |
| MspI | CCGG | 1 cut(s) | 279 |
| MspR9I | CCNGG | 2 cut(s) | 279, 280 |
| MvnI | CGCG | 1 cut(s) | 90 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 373 |
| NciI | CCSGG | 2 cut(s) | 279, 280 |
| NdeII | GATC | 1 cut(s) | 78 |
| NlaIII | CATG | 2 cut(s) | 308, 388 |
| NlaIV | GGNNCC | 1 cut(s) | 390 |
| NsiI | ATGCAT | 1 cut(s) | 310 |
| Psp124BI | GAGCTC | 1 cut(s) | 196 |
| PspN4I | GGNNCC | 1 cut(s) | 390 |
| PspPI | GGNCC | 1 cut(s) | 388 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 169, 201 |
| RseI | CAYNNNNRTG | 1 cut(s) | 113 |
| SacI | GAGCTC | 1 cut(s) | 196 |
| Sau3AI | GATC | 1 cut(s) | 78 |
| Sau96I | GGNCC | 1 cut(s) | 388 |
| ScrFI | CCNGG | 2 cut(s) | 279, 280 |
| SduI | GDGCHC | 2 cut(s) | 164, 196 |
| SetI | ASST | 6 cut(s) | 43, 127, 182, 196, 209, 352 |
| SmaI | CCCGGG | 1 cut(s) | 280 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 113 |
| Sse9I | AATT | 6 cut(s) | 31, 62, 102, 130, 167, 299 |
| SsiI | CCGC | 1 cut(s) | 55 |
| SspMI | CTAG | 1 cut(s) | 122 |
| SstI | GAGCTC | 1 cut(s) | 196 |
| StyD4I | CCNGG | 2 cut(s) | 277, 278 |
| TaaI | ACNGT | 3 cut(s) | 73, 140, 396 |
| TaqI | TCGA | 1 cut(s) | 188 |
| TasI | AATT | 6 cut(s) | 31, 62, 102, 130, 167, 299 |
| TscAI | CASTG | 1 cut(s) | 145 |
| TspDTI | ATGAA | 1 cut(s) | 293 |
| TspMI | CCCGGG | 1 cut(s) | 278 |
| TspRI | CASTG | 1 cut(s) | 145 |
| XapI | RAATTY | 1 cut(s) | 299 |
| XmaI | CCCGGG | 1 cut(s) | 278 |
| XspI | CTAG | 1 cut(s) | 122 |
| Zsp2I | ATGCAT | 1 cut(s) | 310 |