Huntingtin-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0101441 RchiOBHm_Chr5g0023271 |
| rosa_laevigata | RLG00000003196 |
| rosa_multiflora | Rmu_sc0000854.1_g000060 Rmu_sc0002079.1_g000029 Rmu_sc0002416.1_g000019 Rmu_sc0007310.1_g000004 Rmu_sc0011008.1_g000001 Rmu_sc0024464.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00035670 |
| rosa_samantha | Rh1AG220800 Rh2CG152900 Rh3DG314600 Rh6AG050000 Rh6AG411400 Rh7AG053400 Rh7DG427000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 224 |
| AfaI | GTAC | 1 cut(s) | 70 |
| AgsI | TTSAA | 1 cut(s) | 130 |
| AluBI | AGCT | 2 cut(s) | 41, 188 |
| AluI | AGCT | 2 cut(s) | 41, 188 |
| AoxI | GGCC | 1 cut(s) | 252 |
| ApeKI | GCWGC | 3 cut(s) | 14, 185, 192 |
| BbvI | GCAGC | 2 cut(s) | 197, 204 |
| BccI | CCATC | 1 cut(s) | 116 |
| BceAI | ACGGC | 1 cut(s) | 198 |
| BisI | GCNGC | 4 cut(s) | 15, 186, 193, 225 |
| BlsI | GCNGC | 4 cut(s) | 16, 187, 194, 226 |
| BmsI | GCATC | 1 cut(s) | 211 |
| Bse3DI | GCAATG | 1 cut(s) | 9 |
| BseMI | GCAATG | 1 cut(s) | 9 |
| BseXI | GCAGC | 2 cut(s) | 197, 204 |
| BseYI | CCCAGC | 1 cut(s) | 121 |
| BshFI | GGCC | 1 cut(s) | 254 |
| BsnI | GGCC | 1 cut(s) | 254 |
| Bsp143I | GATC | 1 cut(s) | 78 |
| BspACI | CCGC | 1 cut(s) | 224 |
| BspANI | GGCC | 1 cut(s) | 254 |
| BsrDI | GCAATG | 1 cut(s) | 9 |
| BssMI | GATC | 1 cut(s) | 78 |
| Bst4CI | ACNGT | 3 cut(s) | 73, 140, 232 |
| Bst6I | CTCTTC | 1 cut(s) | 180 |
| BstC8I | GCNNGC | 1 cut(s) | 190 |
| BstDEI | CTNAG | 1 cut(s) | 22 |
| BstKTI | GATC | 1 cut(s) | 81 |
| BstMBI | GATC | 1 cut(s) | 78 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 224 |
| BstV1I | GCAGC | 2 cut(s) | 197, 204 |
| BsuRI | GGCC | 1 cut(s) | 254 |
| BtsIMutI | CAGTG | 1 cut(s) | 145 |
| Cac8I | GCNNGC | 1 cut(s) | 190 |
| Csp6I | GTAC | 1 cut(s) | 69 |
| CviJI | RGCY | 5 cut(s) | 5, 41, 188, 227, 254 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 41, 188, 227, 254 |
| CviQI | GTAC | 1 cut(s) | 69 |
| DdeI | CTNAG | 1 cut(s) | 22 |
| DpnI | GATC | 1 cut(s) | 80 |
| DpnII | GATC | 1 cut(s) | 78 |
| Eam1104I | CTCTTC | 1 cut(s) | 180 |
| EarI | CTCTTC | 1 cut(s) | 180 |
| FaiI | YATR | 3 cut(s) | 44, 116, 251 |
| Fnu4HI | GCNGC | 4 cut(s) | 15, 186, 193, 225 |
| Fsp4HI | GCNGC | 4 cut(s) | 15, 186, 193, 225 |
| GluI | GCNGC | 4 cut(s) | 15, 186, 193, 225 |
| GsaI | CCCAGC | 1 cut(s) | 125 |
| HaeIII | GGCC | 1 cut(s) | 254 |
| HinfI | GANTC | 1 cut(s) | 150 |
| Hpy188I | TCNGA | 1 cut(s) | 236 |
| HpyCH4III | ACNGT | 3 cut(s) | 73, 140, 232 |
| HpyCH4IV | ACGT | 2 cut(s) | 168, 213 |
| HpyCH4V | TGCA | 1 cut(s) | 163 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 224 |
| HpyF3I | CTNAG | 1 cut(s) | 22 |
| HpySE526I | ACGT | 2 cut(s) | 168, 213 |
| Kzo9I | GATC | 1 cut(s) | 78 |
| LpnPI | CCDG | 2 cut(s) | 107, 174 |
| Lsp1109I | GCAGC | 2 cut(s) | 197, 204 |
| LweI | GCATC | 1 cut(s) | 211 |
| MaeII | ACGT | 2 cut(s) | 168, 213 |
| MaeIII | GTNAC | 1 cut(s) | 209 |
| MalI | GATC | 1 cut(s) | 80 |
| MboI | GATC | 1 cut(s) | 78 |
| MboII | GAAGA | 2 cut(s) | 88, 167 |
| MluCI | AATT | 3 cut(s) | 62, 102, 130 |
| MmeI | TCCRAC | 2 cut(s) | 203, 214 |
| MnlI | CCTC | 2 cut(s) | 45, 136 |
| MslI | CAYNNNNRTG | 1 cut(s) | 113 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 224 |
| NdeII | GATC | 1 cut(s) | 78 |
| NmuCI | GTSAC | 1 cut(s) | 209 |
| PfeI | GAWTC | 1 cut(s) | 150 |
| PkrI | GCNGC | 4 cut(s) | 16, 187, 194, 226 |
| PspFI | CCCAGC | 1 cut(s) | 121 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| RsaI | GTAC | 1 cut(s) | 70 |
| RsaNI | GTAC | 1 cut(s) | 69 |
| RseI | CAYNNNNRTG | 1 cut(s) | 113 |
| SatI | GCNGC | 4 cut(s) | 15, 186, 193, 225 |
| Sau3AI | GATC | 1 cut(s) | 78 |
| SetI | ASST | 5 cut(s) | 23, 43, 171, 190, 216 |
| SfaNI | GCATC | 1 cut(s) | 211 |
| SgeI | CNNG | 6 cut(s) | 101, 134, 159, 201, 224, 251 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 113 |
| Sse9I | AATT | 3 cut(s) | 62, 102, 130 |
| SsiI | CCGC | 1 cut(s) | 224 |
| TaaI | ACNGT | 3 cut(s) | 73, 140, 232 |
| TaiI | ACGT | 2 cut(s) | 171, 216 |
| TaqI | TCGA | 1 cut(s) | 30 |
| TasI | AATT | 3 cut(s) | 62, 102, 130 |
| TauI | GCSGC | 1 cut(s) | 227 |
| TfiI | GAWTC | 1 cut(s) | 150 |
| TscAI | CASTG | 1 cut(s) | 145 |
| TseFI | GTSAC | 1 cut(s) | 209 |
| TseI | GCWGC | 3 cut(s) | 14, 185, 192 |
| Tsp45I | GTSAC | 1 cut(s) | 209 |
| TspRI | CASTG | 1 cut(s) | 145 |