Nucleolar GTP-binding protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80770 AT1G80770 AT1G80770 AT1G80770 AT1G80770 AT1G80770 |
| fragaria_vesca | FvH4_7g08680 FvH4_7g08680 |
| malus_domestica | MD02G1225900.v1.1 MD07G1087900.v1.1 |
| prunus_persica | Prupe.2G114600_v2.0.a1 |
| pyrus_communis | pycom02g19460 pycom07g07050 |
| rosa_chinensis | RchiOBHm_Chr1g0343911 |
| rosa_laevigata | RLG00000028949 |
| rosa_multiflora | Rmu_sc0007032.1_g000002 Rmu_sc0007696.1_g000024 |
| rosa_roxburghii | Rroxscaffold_4G00310300 |
| rosa_rugosa | Rorug01G0169100 Rorug01G0169200 Rorug01G0169300 |
| rosa_samantha | Rh1AG185700 Rh1BG125600 Rh1BG152500 Rh1CG171500 Rh1DG184500 Rh6BG211600 Rh6BG212200 |
| rosa_wichuraiana | Rw1G015320 Rw1G015360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 41 |
| AatII | GACGTC | 1 cut(s) | 269 |
| Acc36I | ACCTGC | 1 cut(s) | 171 |
| Acc65I | GGTACC | 1 cut(s) | 1740 |
| AccB1I | GGYRCC | 1 cut(s) | 1740 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1861 |
| AccI | GTMKAC | 2 cut(s) | 185, 1354 |
| AccII | CGCG | 1 cut(s) | 152 |
| AciI | CCGC | 4 cut(s) | 156, 178, 277, 300 |
| AclWI | GGATC | 3 cut(s) | 465, 1846, 1859 |
| AcoI | YGGCCR | 2 cut(s) | 172, 403 |
| AcsI | RAATTY | 2 cut(s) | 327, 1628 |
| AcuI | CTGAAG | 1 cut(s) | 1493 |
| AcyI | GRCGYC | 1 cut(s) | 266 |
| AfaI | GTAC | 7 cut(s) | 101, 262, 485, 638, 729, 1548, 1742 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 884, 1331, 1750, 1861 |
| AgsI | TTSAA | 3 cut(s) | 788, 1034, 1886 |
| AjnI | CCWGG | 3 cut(s) | 664, 1731, 1847 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1328, 1360, 1866, 1898 |
| AluBI | AGCT | 6 cut(s) | 410, 546, 723, 811, 1322, 1766 |
| AluI | AGCT | 6 cut(s) | 410, 546, 723, 811, 1322, 1766 |
| Alw21I | GWGCWC | 3 cut(s) | 51, 1324, 1768 |
| Alw26I | GTCTC | 7 cut(s) | 339, 483, 578, 1169, 1205, 1433, 1689 |
| AlwI | GGATC | 3 cut(s) | 465, 1846, 1859 |
| Ama87I | CYCGRG | 4 cut(s) | 50, 128, 1043, 1896 |
| AoxI | GGCC | 5 cut(s) | 172, 403, 632, 1465, 1753 |
| ApaI | GGGCCC | 1 cut(s) | 1757 |
| ApeKI | GCWGC | 1 cut(s) | 279 |
| ApoI | RAATTY | 2 cut(s) | 327, 1628 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 505, 537 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 59, 1881 |
| Asp718I | GGTACC | 1 cut(s) | 1740 |
| AspS9I | GGNCC | 7 cut(s) | 125, 190, 632, 1465, 1581, 1753, 1754 |
| AsuC2I | CCSGG | 3 cut(s) | 129, 130, 1464 |
| AsuHPI | GGTGA | 5 cut(s) | 616, 1001, 1462, 1578, 1646 |
| AvaI | CYCGRG | 4 cut(s) | 50, 128, 1043, 1896 |
| AvaII | GGWCC | 3 cut(s) | 125, 190, 1581 |
| AxyI | CCTNAGG | 2 cut(s) | 1374, 1758 |
| BaeGI | GKGCMC | 1 cut(s) | 1757 |
| BamHI | GGATCC | 1 cut(s) | 1851 |
| BanI | GGYRCC | 1 cut(s) | 1740 |
| BanII | GRGCYC | 4 cut(s) | 1324, 1757, 1768, 1800 |
| Bbv12I | GWGCWC | 3 cut(s) | 51, 1324, 1768 |
| BbvI | GCAGC | 1 cut(s) | 266 |
| BccI | CCATC | 5 cut(s) | 216, 391, 835, 1043, 1647 |
| BceAI | ACGGC | 3 cut(s) | 215, 435, 619 |
| BciT130I | CCWGG | 3 cut(s) | 666, 1733, 1849 |
| BclI | TGATCA | 1 cut(s) | 1594 |
| BcnI | CCSGG | 3 cut(s) | 129, 130, 1464 |
| BcoDI | GTCTC | 7 cut(s) | 339, 483, 578, 1169, 1205, 1433, 1689 |
| BfaI | CTAG | 1 cut(s) | 1292 |
| BfmI | CTRYAG | 1 cut(s) | 1542 |
| BfuAI | ACCTGC | 1 cut(s) | 171 |
| BisI | GCNGC | 2 cut(s) | 280, 301 |
| BlsI | GCNGC | 2 cut(s) | 281, 302 |
| BmcAI | AGTACT | 1 cut(s) | 1548 |
| Bme1390I | CCNGG | 6 cut(s) | 129, 130, 666, 1464, 1733, 1849 |
| Bme18I | GGWCC | 3 cut(s) | 125, 190, 1581 |
| BmeT110I | CYCGRG | 4 cut(s) | 50, 128, 1043, 1896 |
| BmgT120I | GGNCC | 7 cut(s) | 125, 190, 632, 1465, 1581, 1753, 1754 |
| BmiI | GGNNCC | 5 cut(s) | 127, 1582, 1742, 1755, 1853 |
| BmrFI | CCNGG | 6 cut(s) | 129, 130, 666, 1464, 1733, 1849 |
| BmrI | ACTGGG | 1 cut(s) | 642 |
| BmsI | GCATC | 5 cut(s) | 104, 167, 928, 1072, 1133 |
| BmuI | ACTGGG | 1 cut(s) | 642 |
| BpmI | CTGGAG | 5 cut(s) | 568, 582, 759, 1590, 1671 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1137 |
| BpuEI | CTTGAG | 1 cut(s) | 57 |
| BpuMI | CCSGG | 3 cut(s) | 129, 130, 1464 |
| Bsa29I | ATCGAT | 1 cut(s) | 503 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1722 |
| BsaHI | GRCGYC | 1 cut(s) | 266 |
| BsaI | GGTCTC | 1 cut(s) | 339 |
| BsaJI | CCNNGG | 2 cut(s) | 128, 129 |
| BsaWI | WCCGGW | 1 cut(s) | 1743 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1444, 1474 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 884, 1331, 1750, 1861 |
| Bse118I | RCCGGY | 1 cut(s) | 1279 |
| Bse1I | ACTGG | 3 cut(s) | 193, 648, 1688 |
| Bse21I | CCTNAGG | 2 cut(s) | 1374, 1758 |
| Bse3DI | GCAATG | 3 cut(s) | 888, 1265, 1281 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1722 |
| BseBI | CCWGG | 3 cut(s) | 666, 1733, 1849 |
| BseCI | ATCGAT | 1 cut(s) | 503 |
| BseDI | CCNNGG | 2 cut(s) | 128, 129 |
| BseGI | GGATG | 5 cut(s) | 244, 561, 827, 1054, 1087 |
| BseJI | GATNNNNATC | 1 cut(s) | 1722 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 884, 1331, 1750, 1861 |
| BseMI | GCAATG | 3 cut(s) | 888, 1265, 1281 |
| BseNI | ACTGG | 3 cut(s) | 193, 648, 1688 |
| BseRI | GAGGAG | 3 cut(s) | 327, 330, 1223 |
| BseSI | GKGCMC | 1 cut(s) | 1757 |
| BseXI | GCAGC | 1 cut(s) | 266 |
| BsgI | GTGCAG | 1 cut(s) | 457 |
| Bsh1236I | CGCG | 1 cut(s) | 152 |
| Bsh1285I | CGRYCG | 2 cut(s) | 156, 388 |
| BshFI | GGCC | 5 cut(s) | 174, 405, 634, 1467, 1755 |
| BshNI | GGYRCC | 1 cut(s) | 1740 |
| BshVI | ATCGAT | 1 cut(s) | 503 |
| BsiEI | CGRYCG | 2 cut(s) | 156, 388 |
| BsiHKAI | GWGCWC | 3 cut(s) | 51, 1324, 1768 |
| BsiHKCI | CYCGRG | 4 cut(s) | 50, 128, 1043, 1896 |
| BsiSI | CCGG | 7 cut(s) | 129, 171, 288, 297, 1280, 1463, 1744 |
| BslFI | GGGAC | 3 cut(s) | 347, 526, 1594 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 884, 1331, 1750, 1861 |
| BsmAI | GTCTC | 7 cut(s) | 339, 483, 578, 1169, 1205, 1433, 1689 |
| BsmFI | GGGAC | 3 cut(s) | 347, 526, 1594 |
| BsnI | GGCC | 5 cut(s) | 174, 405, 634, 1467, 1755 |
| Bso31I | GGTCTC | 1 cut(s) | 339 |
| BsoBI | CYCGRG | 4 cut(s) | 50, 128, 1043, 1896 |
| Bsp120I | GGGCCC | 1 cut(s) | 1753 |
| Bsp1286I | GDGCHC | 5 cut(s) | 51, 1324, 1757, 1768, 1800 |
| BspACI | CCGC | 4 cut(s) | 156, 178, 277, 300 |
| BspANI | GGCC | 5 cut(s) | 174, 405, 634, 1467, 1755 |
| BspDI | ATCGAT | 1 cut(s) | 503 |
| BspFNI | CGCG | 1 cut(s) | 152 |
| BspLI | GGNNCC | 5 cut(s) | 127, 1582, 1742, 1755, 1853 |
| BspMAI | CTGCAG | 1 cut(s) | 1546 |
| BspMI | ACCTGC | 1 cut(s) | 171 |
| BspPI | GGATC | 3 cut(s) | 465, 1846, 1859 |
| BspQI | GCTCTTC | 1 cut(s) | 1773 |
| BspT107I | GGYRCC | 1 cut(s) | 1740 |
| BspTNI | GGTCTC | 1 cut(s) | 339 |
| BsrDI | GCAATG | 3 cut(s) | 888, 1265, 1281 |
| BsrFI | RCCGGY | 1 cut(s) | 1279 |
| BsrI | ACTGG | 3 cut(s) | 193, 648, 1688 |
| BssAI | RCCGGY | 1 cut(s) | 1279 |
| BssECI | CCNNGG | 2 cut(s) | 128, 129 |
| BssNAI | GTATAC | 1 cut(s) | 1355 |
| BssNI | GRCGYC | 1 cut(s) | 266 |
| Bst1107I | GTATAC | 1 cut(s) | 1355 |
| Bst2UI | CCWGG | 3 cut(s) | 666, 1733, 1849 |
| Bst4CI | ACNGT | 7 cut(s) | 28, 34, 139, 260, 446, 593, 1551 |
| Bst6I | CTCTTC | 6 cut(s) | 526, 581, 1469, 1773, 1810, 1887 |
| BstACI | GRCGYC | 1 cut(s) | 266 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 435, 567, 1828 |
| BstC8I | GCNNGC | 5 cut(s) | 228, 313, 568, 1272, 1469 |
| BstEII | GGTNACC | 1 cut(s) | 1634 |
| BstF5I | GGATG | 5 cut(s) | 244, 561, 827, 1054, 1087 |
| BstFNI | CGCG | 1 cut(s) | 152 |
| BstMAI | GTCTC | 7 cut(s) | 339, 483, 578, 1169, 1205, 1433, 1689 |
| BstMCI | CGRYCG | 2 cut(s) | 156, 388 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 288, 297, 435, 567, 899, 1276, 1828 |
| BstNI | CCWGG | 3 cut(s) | 666, 1733, 1849 |
| BstNSI | RCATGY | 2 cut(s) | 319, 1124 |
| BstPI | GGTNACC | 1 cut(s) | 1634 |
| BstSCI | CCNGG | 6 cut(s) | 127, 128, 664, 1462, 1731, 1847 |
| BstSFI | CTRYAG | 1 cut(s) | 1542 |
| BstSLI | GKGCMC | 1 cut(s) | 1757 |
| BstUI | CGCG | 1 cut(s) | 152 |
| BstV1I | GCAGC | 1 cut(s) | 266 |
| BstX2I | RGATCY | 2 cut(s) | 457, 1851 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 401 |
| BstYI | RGATCY | 2 cut(s) | 457, 1851 |
| BstZ17I | GTATAC | 1 cut(s) | 1355 |
| Bsu15I | ATCGAT | 1 cut(s) | 503 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1374, 1758 |
| BsuRI | GGCC | 5 cut(s) | 174, 405, 634, 1467, 1755 |
| BsuTUI | ATCGAT | 1 cut(s) | 503 |
| BtgZI | GCGATG | 1 cut(s) | 1728 |
| BtsCI | GGATG | 5 cut(s) | 244, 561, 827, 1054, 1087 |
| BtsI | GCAGTG | 1 cut(s) | 223 |
| BtsIMutI | CAGTG | 5 cut(s) | 200, 223, 655, 1695, 1785 |
| BveI | ACCTGC | 1 cut(s) | 171 |
| Cac8I | GCNNGC | 5 cut(s) | 228, 313, 568, 1272, 1469 |
| Cfr10I | RCCGGY | 1 cut(s) | 1279 |
| Cfr13I | GGNCC | 7 cut(s) | 125, 190, 632, 1465, 1581, 1753, 1754 |
| Cfr9I | CCCGGG | 1 cut(s) | 128 |
| ClaI | ATCGAT | 1 cut(s) | 503 |
| CseI | GACGC | 1 cut(s) | 158 |
| Csp6I | GTAC | 7 cut(s) | 100, 261, 484, 637, 728, 1547, 1741 |
| CviAII | CATG | 7 cut(s) | 316, 379, 1121, 1436, 1559, 1772, 1823 |
| CviQI | GTAC | 7 cut(s) | 100, 261, 484, 637, 728, 1547, 1741 |
| DraI | TTTAAA | 2 cut(s) | 1197, 1431 |
| EaeI | YGGCCR | 2 cut(s) | 172, 403 |
| Eam1104I | CTCTTC | 6 cut(s) | 526, 581, 1469, 1773, 1810, 1887 |
| EarI | CTCTTC | 6 cut(s) | 526, 581, 1469, 1773, 1810, 1887 |
| Ecl136II | GAGCTC | 2 cut(s) | 1322, 1766 |
| Eco24I | GRGCYC | 4 cut(s) | 1324, 1757, 1768, 1800 |
| Eco31I | GGTCTC | 1 cut(s) | 339 |
| Eco32I | GATATC | 1 cut(s) | 1147 |
| Eco47I | GGWCC | 3 cut(s) | 125, 190, 1581 |
| Eco53kI | GAGCTC | 2 cut(s) | 1322, 1766 |
| Eco57I | CTGAAG | 1 cut(s) | 1493 |
| Eco81I | CCTNAGG | 2 cut(s) | 1374, 1758 |
| Eco88I | CYCGRG | 4 cut(s) | 50, 128, 1043, 1896 |
| Eco91I | GGTNACC | 1 cut(s) | 1634 |
| EcoICRI | GAGCTC | 2 cut(s) | 1322, 1766 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1581, 1754 |
| EcoO65I | GGTNACC | 1 cut(s) | 1634 |
| EcoRII | CCWGG | 3 cut(s) | 664, 1731, 1847 |
| EcoRV | GATATC | 1 cut(s) | 1147 |
| EcoT22I | ATGCAT | 2 cut(s) | 943, 1126 |
| EcoT38I | GRGCYC | 4 cut(s) | 1324, 1757, 1768, 1800 |
| FaeI | CATG | 7 cut(s) | 319, 382, 1124, 1439, 1562, 1775, 1826 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1866, 1898 |
| FaqI | GGGAC | 3 cut(s) | 347, 526, 1594 |
| FatI | CATG | 7 cut(s) | 315, 378, 1120, 1435, 1558, 1771, 1822 |
| FbaI | TGATCA | 1 cut(s) | 1594 |
| FblI | GTMKAC | 2 cut(s) | 185, 1354 |
| Fnu4HI | GCNGC | 2 cut(s) | 280, 301 |
| FokI | GGATG | 5 cut(s) | 231, 568, 814, 1061, 1094 |
| FriOI | GRGCYC | 4 cut(s) | 1324, 1757, 1768, 1800 |
| Fsp4HI | GCNGC | 2 cut(s) | 280, 301 |
| FspBI | CTAG | 1 cut(s) | 1292 |
| GluI | GCNGC | 2 cut(s) | 280, 301 |
| GsuI | CTGGAG | 5 cut(s) | 568, 582, 759, 1590, 1671 |
| HaeIII | GGCC | 5 cut(s) | 174, 405, 634, 1467, 1755 |
| HapII | CCGG | 7 cut(s) | 129, 171, 288, 297, 1280, 1463, 1744 |
| HgaI | GACGC | 1 cut(s) | 158 |
| Hin1I | GRCGYC | 1 cut(s) | 266 |
| Hin1II | CATG | 7 cut(s) | 319, 382, 1124, 1439, 1562, 1775, 1826 |
| HincII | GTYRAC | 3 cut(s) | 186, 835, 1155 |
| HindII | GTYRAC | 3 cut(s) | 186, 835, 1155 |
| HinfI | GANTC | 3 cut(s) | 167, 293, 1682 |
| HpaII | CCGG | 7 cut(s) | 129, 171, 288, 297, 1280, 1463, 1744 |
| HphI | GGTGA | 5 cut(s) | 616, 1001, 1462, 1578, 1646 |
| Hpy166II | GTNNAC | 6 cut(s) | 24, 186, 689, 835, 1155, 1355 |
| Hpy188I | TCNGA | 7 cut(s) | 125, 241, 374, 807, 982, 1089, 1804 |
| Hpy188III | TCNNGA | 9 cut(s) | 52, 164, 270, 599, 776, 1292, 1569, 1727, 1862 |
| Hpy8I | GTNNAC | 6 cut(s) | 24, 186, 689, 835, 1155, 1355 |
| Hpy99I | CGWCG | 4 cut(s) | 190, 268, 271, 1162 |
| HpyAV | CCTTC | 3 cut(s) | 782, 853, 1159 |
| HpyCH4III | ACNGT | 7 cut(s) | 28, 34, 139, 260, 446, 593, 1551 |
| HpyCH4IV | ACGT | 2 cut(s) | 266, 1157 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 288, 297, 435, 567, 899, 1276, 1828 |
| HpySE526I | ACGT | 2 cut(s) | 266, 1157 |
| Hsp92I | GRCGYC | 1 cut(s) | 266 |
| Hsp92II | CATG | 7 cut(s) | 319, 382, 1124, 1439, 1562, 1775, 1826 |
| KpnI | GGTACC | 1 cut(s) | 1744 |
| Ksp22I | TGATCA | 1 cut(s) | 1594 |
| LguI | GCTCTTC | 1 cut(s) | 1773 |
| LmnI | GCTCC | 3 cut(s) | 1319, 1327, 1763 |
| Lsp1109I | GCAGC | 1 cut(s) | 266 |
| LweI | GCATC | 5 cut(s) | 104, 167, 928, 1072, 1133 |
| MaeI | CTAG | 1 cut(s) | 1292 |
| MaeII | ACGT | 2 cut(s) | 266, 1157 |
| MaeIII | GTNAC | 7 cut(s) | 28, 232, 254, 440, 1248, 1450, 1634 |
| MflI | RGATCY | 2 cut(s) | 457, 1851 |
| MhlI | GDGCHC | 5 cut(s) | 51, 1324, 1757, 1768, 1800 |
| MluCI | AATT | 9 cut(s) | 36, 327, 870, 1034, 1054, 1498, 1508, 1628, 1748 |
| MlyI | GAGTC | 2 cut(s) | 287, 1691 |
| MmeI | TCCRAC | 3 cut(s) | 604, 1090, 1297 |
| Mph1103I | ATGCAT | 2 cut(s) | 943, 1126 |
| MroXI | GAANNNNTTC | 2 cut(s) | 59, 1881 |
| MseI | TTAA | 7 cut(s) | 83, 744, 968, 1037, 1196, 1430, 1808 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1129 |
| MspA1I | CMGCKG | 1 cut(s) | 279 |
| MspI | CCGG | 7 cut(s) | 129, 171, 288, 297, 1280, 1463, 1744 |
| MspR9I | CCNGG | 6 cut(s) | 129, 130, 666, 1464, 1733, 1849 |
| MvaI | CCWGG | 3 cut(s) | 666, 1733, 1849 |
| MvnI | CGCG | 1 cut(s) | 152 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 288, 297, 435, 567, 899, 1276, 1828 |
| NciI | CCSGG | 3 cut(s) | 129, 130, 1464 |
| NlaIII | CATG | 7 cut(s) | 319, 382, 1124, 1439, 1562, 1775, 1826 |
| NlaIV | GGNNCC | 5 cut(s) | 127, 1582, 1742, 1755, 1853 |
| NmeAIII | GCCGAG | 1 cut(s) | 431 |
| NmuCI | GTSAC | 5 cut(s) | 28, 232, 440, 1450, 1634 |
| NsiI | ATGCAT | 2 cut(s) | 943, 1126 |
| NspI | RCATGY | 2 cut(s) | 319, 1124 |
| PaeR7I | CTCGAG | 1 cut(s) | 50 |
| PciSI | GCTCTTC | 1 cut(s) | 1773 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1157 |
| PdmI | GAANNNNTTC | 2 cut(s) | 59, 1881 |
| PfeI | GAWTC | 1 cut(s) | 167 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1861 |
| PkrI | GCNGC | 2 cut(s) | 281, 302 |
| PleI | GAGTC | 2 cut(s) | 287, 1690 |
| PpsI | GAGTC | 2 cut(s) | 287, 1690 |
| PpuMI | RGGWCCY | 1 cut(s) | 1581 |
| PsiI | TTATAA | 1 cut(s) | 41 |
| Psp124BI | GAGCTC | 2 cut(s) | 1324, 1768 |
| Psp5II | RGGWCCY | 1 cut(s) | 1581 |
| Psp6I | CCWGG | 3 cut(s) | 664, 1731, 1847 |
| PspEI | GGTNACC | 1 cut(s) | 1634 |
| PspGI | CCWGG | 3 cut(s) | 664, 1731, 1847 |
| PspN4I | GGNNCC | 5 cut(s) | 127, 1582, 1742, 1755, 1853 |
| PspOMI | GGGCCC | 1 cut(s) | 1753 |
| PspPI | GGNCC | 7 cut(s) | 125, 190, 632, 1465, 1581, 1753, 1754 |
| PspPPI | RGGWCCY | 1 cut(s) | 1581 |
| PstI | CTGCAG | 1 cut(s) | 1546 |
| PsuI | RGATCY | 2 cut(s) | 457, 1851 |
| RsaI | GTAC | 7 cut(s) | 101, 262, 485, 638, 729, 1548, 1742 |
| RsaNI | GTAC | 7 cut(s) | 100, 261, 484, 637, 728, 1547, 1741 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1129 |
| SacI | GAGCTC | 2 cut(s) | 1324, 1768 |
| SalI | GTCGAC | 1 cut(s) | 184 |
| SapI | GCTCTTC | 1 cut(s) | 1773 |
| SaqAI | TTAA | 7 cut(s) | 83, 744, 968, 1037, 1196, 1430, 1808 |
| SatI | GCNGC | 2 cut(s) | 280, 301 |
| Sau96I | GGNCC | 7 cut(s) | 125, 190, 632, 1465, 1581, 1753, 1754 |
| ScaI | AGTACT | 1 cut(s) | 1548 |
| SchI | GAGTC | 2 cut(s) | 287, 1691 |
| ScrFI | CCNGG | 6 cut(s) | 129, 130, 666, 1464, 1733, 1849 |
| SduI | GDGCHC | 5 cut(s) | 51, 1324, 1757, 1768, 1800 |
| SfaNI | GCATC | 5 cut(s) | 104, 167, 928, 1072, 1133 |
| SfcI | CTRYAG | 1 cut(s) | 1542 |
| Sfr274I | CTCGAG | 1 cut(s) | 50 |
| SinI | GGWCC | 3 cut(s) | 125, 190, 1581 |
| SlaI | CTCGAG | 1 cut(s) | 50 |
| SmaI | CCCGGG | 1 cut(s) | 130 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1129 |
| SmlI | CTYRAG | 2 cut(s) | 50, 72 |
| SmoI | CTYRAG | 2 cut(s) | 50, 72 |
| Sse9I | AATT | 9 cut(s) | 36, 327, 870, 1034, 1054, 1498, 1508, 1628, 1748 |
| SsiI | CCGC | 4 cut(s) | 156, 178, 277, 300 |
| SspI | AATATT | 2 cut(s) | 58, 898 |
| SspMI | CTAG | 1 cut(s) | 1292 |
| SstI | GAGCTC | 2 cut(s) | 1324, 1768 |
| StyD4I | CCNGG | 6 cut(s) | 127, 128, 664, 1462, 1731, 1847 |
| TaaI | ACNGT | 7 cut(s) | 28, 34, 139, 260, 446, 593, 1551 |
| TaiI | ACGT | 2 cut(s) | 269, 1160 |
| TaqI | TCGA | 7 cut(s) | 51, 185, 269, 388, 503, 524, 1160 |
| TaqII | GACCGA | 1 cut(s) | 374 |
| TasI | AATT | 9 cut(s) | 36, 327, 870, 1034, 1054, 1498, 1508, 1628, 1748 |
| TatI | WGTACW | 2 cut(s) | 483, 1546 |
| TauI | GCSGC | 1 cut(s) | 303 |
| TfiI | GAWTC | 1 cut(s) | 167 |
| Tru1I | TTAA | 7 cut(s) | 83, 744, 968, 1037, 1196, 1430, 1808 |
| Tru9I | TTAA | 7 cut(s) | 83, 744, 968, 1037, 1196, 1430, 1808 |
| TscAI | CASTG | 5 cut(s) | 200, 223, 655, 1695, 1785 |
| TseFI | GTSAC | 5 cut(s) | 28, 232, 440, 1450, 1634 |
| TseI | GCWGC | 1 cut(s) | 279 |
| Tsp45I | GTSAC | 5 cut(s) | 28, 232, 440, 1450, 1634 |
| TspDTI | ATGAA | 8 cut(s) | 52, 452, 962, 1074, 1629, 1760, 1803, 1839 |
| TspGWI | ACGGA | 2 cut(s) | 203, 820 |
| TspMI | CCCGGG | 1 cut(s) | 128 |
| TspRI | CASTG | 5 cut(s) | 200, 223, 655, 1695, 1785 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1861 |
| VpaK11BI | GGWCC | 3 cut(s) | 125, 190, 1581 |
| XapI | RAATTY | 2 cut(s) | 327, 1628 |
| XbaI | TCTAGA | 1 cut(s) | 1291 |
| XceI | RCATGY | 2 cut(s) | 319, 1124 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1565 |
| XhoI | CTCGAG | 1 cut(s) | 50 |
| XmaI | CCCGGG | 1 cut(s) | 128 |
| XmiI | GTMKAC | 2 cut(s) | 185, 1354 |
| XmnI | GAANNNNTTC | 2 cut(s) | 59, 1881 |
| XspI | CTAG | 1 cut(s) | 1292 |
| ZraI | GACGTC | 1 cut(s) | 267 |
| ZrmI | AGTACT | 1 cut(s) | 1548 |
| Zsp2I | ATGCAT | 2 cut(s) | 943, 1126 |