Rmu_sc0007716.1_g000004

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007716.1
Physical Location & Seq
Forward (+)
27387 .. 32168
4782 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007716.1_g000004.1.cds

Sequence Viewer

Length: 1473 bp
atgcaggccgaggcctcaagacctcttcgaggtgctcatcgctccactgctactcatttcgagtcgataaagcgtttgattattgctcaagcttactccggtcccagccgcagaggaagcggaatggcttcgagagtcgttgatcaacaacaagccagaggtatggcagtggccggagtaggagttaagccacagaagaagaacgctgtggcggatgggagaaaccgaaaaccacttggtgagattggcaaccagcaacttgttcgaggaattgagatcaagccgaatcgccctataacaaggaacttccgggctcaattactagctaatgcacaggctgcagcagctaatgagaacaacaagaagcaagtttgtgttaacgtgaatgaacttgtggcggttaaaagggatgaggcacccaagccagtgcagaagaaagtagttaatatcaagttgaagcccaaggagataatcgaaatcagtccggagacagaggaaggcttgattgaaaaggttaagcatgagaagaagaaagaaggagcttcaaagaagaaagcagcaccaactcttacttcagtccttactgctagaagcaaggctgcttgtggtttgactaataaaccaaaggatgtgattgttgatattgatgccaaagatgctggtaatgacttggctgctgttgaatatgttgaggacatgtacaagttctataagcttgttgagaatgagaaccgccctcatgactatattgactcacagcctgagattaacgaaaacatgagagcaattctgatggactggctggtggttgttcacagcaagttcgagctttctccggagactttctacctaaccaccaacataattgaccggttcctttcagtcaagactgtgcctaggagagagttgcaattagttggcatcagcgccatgctgattgcctcaaagtatgaagagatctggccccctcaggtcgatgactttgttagcctttcggacaatgcttacagtaatgtgcagatattggtgatggagaaaatgatactgggtaagttggagtggaccttgactgtacctacactctatgtgttcttggtccggttcattaaagccgcaattccagatgaacaaatggaaaacctggtctactttctagctgaattgggtatgatgcattatggtatgcttatgtactgcccttcaatggttgctgcctctgcagtctatgctgctaaatgcactctaaacaagagtcctgcttggtgtgacacgcttaagcttcacactggtttctcagaatctcaactaattgattgttccaaagtgttggtgagcttgcatgctaaggctgcgaaaaacaagcttcagggtgtgttcaagaagtacttgagttctgagagaggtgctgtggctttgctgtctccagccaaagtgcttttgcccccagccaaagcttcaggaggatcttcatag
Functional Annotation

Protein Analysis

490

Amino Acids

54.2

Weight (kDa)

9.38

Isoelectric Point (pI)

44.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 415
AccI GTMKAC 1 cut(s) 1146
AccIII TCCGGA 2 cut(s) 484, 835
AciI CCGC 6 cut(s) 109, 120, 212, 398, 733, 1113
AclWI GGATC 1 cut(s) 1471
AcoI YGGCCR 1 cut(s) 171
AcuI CTGAAG 3 cut(s) 558, 1349, 1440
AdeI CACNNNGTG 1 cut(s) 239
AfaI GTAC 4 cut(s) 701, 1074, 1193, 1385
AfiI CCNNNNNNNGG 2 cut(s) 29, 1204
AflII CTTAAG 1 cut(s) 1274
AflIII ACRYGT 1 cut(s) 696
AgeI ACCGGT 1 cut(s) 870
AgsI TTSAA 6 cut(s) 457, 509, 546, 683, 1203, 1378
AjnI CCWGG 1 cut(s) 1140
AjuI GAANNNNNNNTTGG 2 cut(s) 556, 588
Alw21I GWGCWC 1 cut(s) 37
Alw26I GTCTC 3 cut(s) 482, 833, 1425
AlwI GGATC 1 cut(s) 1471
Aor13HI TCCGGA 2 cut(s) 484, 835
AoxI GGCC 4 cut(s) 6, 12, 171, 962
ApeKI GCWGC 9 cut(s) 338, 341, 344, 557, 599, 674, 1211, 1229, 1349
AsiGI ACCGGT 1 cut(s) 870
Asp700I GAANNNNTTC 1 cut(s) 127
AspA2I CCTAGG 1 cut(s) 896
AspLEI GCGC 1 cut(s) 929
AspS9I GGNCC 4 cut(s) 101, 963, 1062, 1096
AsuC2I CCSGG 1 cut(s) 311
AsuHPI GGTGA 3 cut(s) 251, 1039, 1342
AvaII GGWCC 3 cut(s) 101, 1062, 1096
AvrII CCTAGG 1 cut(s) 896
AxyI CCTNAGG 1 cut(s) 969
BanI GGYRCC 1 cut(s) 415
BanII GRGCYC 1 cut(s) 316
Bbv12I GWGCWC 1 cut(s) 37
BbvI GCAGC 9 cut(s) 325, 353, 356, 569, 586, 661, 1198, 1216, 1336
BccI CCATC 3 cut(s) 209, 787, 1024
BcgI CGANNNNNNTGC 2 cut(s) 245, 279
BciT130I CCWGG 1 cut(s) 1142
BclI TGATCA 1 cut(s) 142
BcnI CCSGG 1 cut(s) 311
BcoDI GTCTC 3 cut(s) 482, 833, 1425
BfaI CTAG 4 cut(s) 323, 588, 897, 1154
BfmI CTRYAG 2 cut(s) 339, 1218
BfoI RGCGCY 1 cut(s) 930
BfrI CTTAAG 1 cut(s) 1274
BglII AGATCT 1 cut(s) 957
BlnI CCTAGG 1 cut(s) 896
BmcAI AGTACT 1 cut(s) 1385
Bme1390I CCNGG 2 cut(s) 311, 1142
Bme18I GGWCC 3 cut(s) 101, 1062, 1096
BmgT120I GGNCC 4 cut(s) 101, 963, 1062, 1096
BmiI GGNNCC 4 cut(s) 103, 417, 875, 965
BmrFI CCNGG 2 cut(s) 311, 1142
BmrI ACTGGG 1 cut(s) 1055
BmsI GCATC 4 cut(s) 637, 646, 930, 1161
BmuI ACTGGG 1 cut(s) 1055
BpmI CTGGAG 1 cut(s) 1407
Bpu10I CCTNAGC 1 cut(s) 1344
BpuEI CTTGAG 2 cut(s) 72, 1408
BpuMI CCSGG 1 cut(s) 311
BsaJI CCNNGG 3 cut(s) 9, 462, 896
BsaWI WCCGGW 5 cut(s) 98, 484, 835, 870, 1098
BsaXI ACNNNNNCTCC 2 cut(s) 168, 198
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 1204
Bse118I RCCGGY 1 cut(s) 870
Bse1I ACTGG 4 cut(s) 425, 803, 1050, 1291
Bse21I CCTNAGG 1 cut(s) 969
BseAI TCCGGA 2 cut(s) 484, 835
BseBI CCWGG 1 cut(s) 1142
BseDI CCNNGG 3 cut(s) 9, 462, 896
BseGI GGATG 3 cut(s) 220, 415, 634
BseLI CCNNNNNNNGG 2 cut(s) 29, 1204
BseMII CTCAG 4 cut(s) 753, 983, 1308, 1386
BseNI ACTGG 4 cut(s) 425, 803, 1050, 1291
BseXI GCAGC 9 cut(s) 325, 353, 356, 569, 586, 661, 1198, 1216, 1336
BseYI CCCAGC 2 cut(s) 104, 1444
BsgI GTGCAG 2 cut(s) 449, 1037
BshFI GGCC 4 cut(s) 8, 14, 173, 964
BshNI GGYRCC 1 cut(s) 415
BshTI ACCGGT 1 cut(s) 870
BsiHKAI GWGCWC 1 cut(s) 37
BsiSI CCGG 7 cut(s) 99, 174, 310, 485, 836, 871, 1099
BslFI GGGAC 1 cut(s) 87
BslI CCNNNNNNNGG 2 cut(s) 29, 1204
BsmAI GTCTC 3 cut(s) 482, 833, 1425
BsmFI GGGAC 1 cut(s) 87
BsnI GGCC 4 cut(s) 8, 14, 173, 964
Bsp1286I GDGCHC 2 cut(s) 37, 316
Bsp13I TCCGGA 2 cut(s) 484, 835
Bsp1407I TGTACA 1 cut(s) 699
Bsp143I GATC 4 cut(s) 142, 276, 957, 1463
BspACI CCGC 6 cut(s) 109, 120, 212, 398, 733, 1113
BspANI GGCC 4 cut(s) 8, 14, 173, 964
BspCNI CTCAG 4 cut(s) 754, 982, 1307, 1387
BspEI TCCGGA 2 cut(s) 484, 835
BspHI TCATGA 1 cut(s) 739
BspLI GGNNCC 4 cut(s) 103, 417, 875, 965
BspMAI CTGCAG 2 cut(s) 343, 1222
BspPI GGATC 1 cut(s) 1471
BspT107I GGYRCC 1 cut(s) 415
BspTI CTTAAG 1 cut(s) 1274
BsrFI RCCGGY 1 cut(s) 870
BsrGI TGTACA 1 cut(s) 699
BsrI ACTGG 4 cut(s) 425, 803, 1050, 1291
BssAI RCCGGY 1 cut(s) 870
BssECI CCNNGG 3 cut(s) 9, 462, 896
BssMI GATC 4 cut(s) 142, 276, 957, 1463
BssT1I CCWWGG 2 cut(s) 462, 896
Bst2UI CCWGG 1 cut(s) 1142
Bst4CI ACNGT 3 cut(s) 892, 1010, 1072
Bst6I CTCTTC 2 cut(s) 30, 948
BstAFI CTTAAG 1 cut(s) 1274
BstAPI GCANNNNNTGC 2 cut(s) 338, 1226
BstAUI TGTACA 1 cut(s) 699
BstC8I GCNNGC 3 cut(s) 6, 1337, 1341
BstDEI CTNAG 5 cut(s) 762, 969, 1294, 1344, 1395
BstENI CCTNNNNNAGG 1 cut(s) 27
BstF5I GGATG 3 cut(s) 220, 415, 634
BstH2I RGCGCY 1 cut(s) 930
BstHHI GCGC 1 cut(s) 929
BstKTI GATC 4 cut(s) 145, 279, 960, 1466
BstMAI GTCTC 3 cut(s) 482, 833, 1425
BstMBI GATC 4 cut(s) 142, 276, 957, 1463
BstMWI GCNNNNNNNGC 7 cut(s) 117, 338, 344, 656, 1217, 1226, 1349
BstNI CCWGG 1 cut(s) 1142
BstNSI RCATGY 2 cut(s) 700, 1343
BstSCI CCNGG 2 cut(s) 309, 1140
BstSFI CTRYAG 2 cut(s) 339, 1218
BstV1I GCAGC 9 cut(s) 325, 353, 356, 569, 586, 661, 1198, 1216, 1336
BstX2I RGATCY 2 cut(s) 957, 1463
BstXI CCANNNNNNTGG 2 cut(s) 163, 1327
BstYI RGATCY 2 cut(s) 957, 1463
Bsu36I CCTNAGG 1 cut(s) 969
BsuRI GGCC 4 cut(s) 8, 14, 173, 964
BtgZI GCGATG 1 cut(s) 23
BtsCI GGATG 3 cut(s) 220, 415, 634
BtsI GCAGTG 2 cut(s) 45, 174
BtsIMutI CAGTG 4 cut(s) 45, 174, 432, 1284
Cac8I GCNNGC 3 cut(s) 6, 1337, 1341
CciI TCATGA 1 cut(s) 739
CfoI GCGC 1 cut(s) 929
Cfr10I RCCGGY 1 cut(s) 870
Cfr13I GGNCC 4 cut(s) 101, 963, 1062, 1096
CsiI ACCWGGT 1 cut(s) 1140
Csp6I GTAC 4 cut(s) 700, 1073, 1192, 1384
CspAI ACCGGT 1 cut(s) 870
CviAII CATG 6 cut(s) 521, 697, 740, 778, 931, 1340
CviQI GTAC 4 cut(s) 700, 1073, 1192, 1384
DdeI CTNAG 5 cut(s) 762, 969, 1294, 1344, 1395
DpnI GATC 4 cut(s) 144, 278, 959, 1465
DpnII GATC 4 cut(s) 142, 276, 957, 1463
DraIII CACNNNGTG 1 cut(s) 239
EaeI YGGCCR 1 cut(s) 171
Eam1104I CTCTTC 2 cut(s) 30, 948
EarI CTCTTC 2 cut(s) 30, 948
EciI GGCGGA 1 cut(s) 227
Eco130I CCWWGG 2 cut(s) 462, 896
Eco147I AGGCCT 1 cut(s) 14
Eco24I GRGCYC 1 cut(s) 316
Eco47I GGWCC 3 cut(s) 101, 1062, 1096
Eco57I CTGAAG 3 cut(s) 558, 1349, 1440
Eco81I CCTNAGG 1 cut(s) 969
EcoNI CCTNNNNNAGG 1 cut(s) 27
EcoRII CCWGG 1 cut(s) 1140
EcoT14I CCWWGG 2 cut(s) 462, 896
EcoT22I ATGCAT 1 cut(s) 1176
EcoT38I GRGCYC 1 cut(s) 316
ErhI CCWWGG 2 cut(s) 462, 896
FaeI CATG 6 cut(s) 524, 700, 743, 781, 934, 1343
FalI AAGNNNNNCTT 2 cut(s) 1370, 1402
FaqI GGGAC 1 cut(s) 87
FatI CATG 6 cut(s) 520, 696, 739, 777, 930, 1339
FbaI TGATCA 1 cut(s) 142
FblI GTMKAC 1 cut(s) 1146
FokI GGATG 3 cut(s) 227, 422, 641
FriOI GRGCYC 1 cut(s) 316
FspBI CTAG 4 cut(s) 323, 588, 897, 1154
GlaI GCGC 1 cut(s) 928
GsaI CCCAGC 2 cut(s) 108, 1448
GsuI CTGGAG 1 cut(s) 1407
HaeII RGCGCY 1 cut(s) 930
HaeIII GGCC 4 cut(s) 8, 14, 173, 964
HapII CCGG 7 cut(s) 99, 174, 310, 485, 836, 871, 1099
HhaI GCGC 1 cut(s) 929
Hin1II CATG 6 cut(s) 524, 700, 743, 781, 934, 1343
Hin6I GCGC 1 cut(s) 927
HinP1I GCGC 1 cut(s) 927
HincII GTYRAC 1 cut(s) 379
HindII GTYRAC 1 cut(s) 379
HindIII AAGCTT 5 cut(s) 90, 713, 1277, 1361, 1452
HinfI GANTC 6 cut(s) 62, 135, 286, 752, 1252, 1298
HpaI GTTAAC 1 cut(s) 379
HpaII CCGG 7 cut(s) 99, 174, 310, 485, 836, 871, 1099
HphI GGTGA 3 cut(s) 251, 1039, 1342
Hpy166II GTNNAC 4 cut(s) 379, 814, 1062, 1147
Hpy188I TCNGA 4 cut(s) 792, 997, 1297, 1396
Hpy188III TCNNGA 9 cut(s) 18, 132, 485, 740, 836, 886, 1121, 1378, 1458
Hpy8I GTNNAC 4 cut(s) 379, 814, 1062, 1147
HpyAV CCTTC 3 cut(s) 491, 530, 1209
HpyCH4III ACNGT 3 cut(s) 892, 1010, 1072
HpyCH4IV ACGT 1 cut(s) 381
HpyF10VI GCNNNNNNNGC 7 cut(s) 117, 338, 344, 656, 1217, 1226, 1349
HpyF3I CTNAG 5 cut(s) 762, 969, 1294, 1344, 1395
HpySE526I ACGT 1 cut(s) 381
Hsp92II CATG 6 cut(s) 524, 700, 743, 781, 934, 1343
HspAI GCGC 1 cut(s) 927
Kpn2I TCCGGA 2 cut(s) 484, 835
Ksp22I TGATCA 1 cut(s) 142
KspAI GTTAAC 1 cut(s) 379
Kzo9I GATC 4 cut(s) 142, 276, 957, 1463
LmnI GCTCC 2 cut(s) 47, 539
Lsp1109I GCAGC 9 cut(s) 325, 353, 356, 569, 586, 661, 1198, 1216, 1336
LweI GCATC 4 cut(s) 637, 646, 930, 1161
MabI ACCWGGT 1 cut(s) 1140
MaeI CTAG 4 cut(s) 323, 588, 897, 1154
MaeII ACGT 1 cut(s) 381
MaeIII GTNAC 1 cut(s) 1265
MalI GATC 4 cut(s) 144, 278, 959, 1465
MboI GATC 4 cut(s) 142, 276, 957, 1463
MboII GAAGA 9 cut(s) 17, 208, 211, 445, 538, 541, 562, 965, 1458
MflI RGATCY 2 cut(s) 957, 1463
MhlI GDGCHC 2 cut(s) 37, 316
MluCI AATT 8 cut(s) 270, 317, 786, 864, 911, 1116, 1160, 1308
MlyI GAGTC 4 cut(s) 71, 144, 746, 1261
MmeI TCCRAC 1 cut(s) 1035
Mph1103I ATGCAT 1 cut(s) 1176
MroI TCCGGA 2 cut(s) 484, 835
MroXI GAANNNNTTC 1 cut(s) 127
MseI TTAA 8 cut(s) 186, 378, 402, 444, 516, 768, 1107, 1275
MspCI CTTAAG 1 cut(s) 1274
MspI CCGG 7 cut(s) 99, 174, 310, 485, 836, 871, 1099
MspR9I CCNGG 2 cut(s) 311, 1142
MvaI CCWGG 1 cut(s) 1142
MwoI GCNNNNNNNGC 7 cut(s) 117, 338, 344, 656, 1217, 1226, 1349
NciI CCSGG 1 cut(s) 311
NdeII GATC 4 cut(s) 142, 276, 957, 1463
NlaIII CATG 6 cut(s) 524, 700, 743, 781, 934, 1343
NlaIV GGNNCC 4 cut(s) 103, 417, 875, 965
NmeAIII GCCGAG 1 cut(s) 34
NmuCI GTSAC 1 cut(s) 1265
NsiI ATGCAT 1 cut(s) 1176
NspI RCATGY 2 cut(s) 700, 1343
PaeI GCATGC 1 cut(s) 1343
PagI TCATGA 1 cut(s) 739
PceI AGGCCT 1 cut(s) 14
PciI ACATGT 1 cut(s) 696
PdmI GAANNNNTTC 1 cut(s) 127
PfeI GAWTC 2 cut(s) 286, 1298
PinAI ACCGGT 1 cut(s) 870
PleI GAGTC 4 cut(s) 70, 143, 746, 1260
PpsI GAGTC 4 cut(s) 70, 143, 746, 1260
PscI ACATGT 1 cut(s) 696
Psp6I CCWGG 1 cut(s) 1140
PspFI CCCAGC 2 cut(s) 104, 1444
PspGI CCWGG 1 cut(s) 1140
PspN4I GGNNCC 4 cut(s) 103, 417, 875, 965
PspPI GGNCC 4 cut(s) 101, 963, 1062, 1096
PstI CTGCAG 2 cut(s) 343, 1222
PsuI RGATCY 2 cut(s) 957, 1463
RsaI GTAC 4 cut(s) 701, 1074, 1193, 1385
RsaNI GTAC 4 cut(s) 700, 1073, 1192, 1384
SaqAI TTAA 8 cut(s) 186, 378, 402, 444, 516, 768, 1107, 1275
Sau3AI GATC 4 cut(s) 142, 276, 957, 1463
Sau96I GGNCC 4 cut(s) 101, 963, 1062, 1096
ScaI AGTACT 1 cut(s) 1385
SchI GAGTC 4 cut(s) 71, 144, 746, 1261
ScrFI CCNGG 2 cut(s) 311, 1142
SduI GDGCHC 2 cut(s) 37, 316
SexAI ACCWGGT 1 cut(s) 1140
SfaNI GCATC 4 cut(s) 637, 646, 930, 1161
SfcI CTRYAG 2 cut(s) 339, 1218
SinI GGWCC 3 cut(s) 101, 1062, 1096
SmlI CTYRAG 4 cut(s) 16, 87, 1274, 1387
SmoI CTYRAG 4 cut(s) 16, 87, 1274, 1387
SphI GCATGC 1 cut(s) 1343
Sse9I AATT 8 cut(s) 270, 317, 786, 864, 911, 1116, 1160, 1308
SseBI AGGCCT 1 cut(s) 14
SsiI CCGC 6 cut(s) 109, 120, 212, 398, 733, 1113
SspMI CTAG 4 cut(s) 323, 588, 897, 1154
StuI AGGCCT 1 cut(s) 14
StyD4I CCNGG 2 cut(s) 309, 1140
StyI CCWWGG 2 cut(s) 462, 896
TaaI ACNGT 3 cut(s) 892, 1010, 1072
TaiI ACGT 1 cut(s) 384
TaqI TCGA 8 cut(s) 28, 60, 65, 131, 265, 474, 825, 975
TasI AATT 8 cut(s) 270, 317, 786, 864, 911, 1116, 1160, 1308
TatI WGTACW 3 cut(s) 699, 1191, 1383
TauI GCSGC 2 cut(s) 111, 1115
TfiI GAWTC 2 cut(s) 286, 1298
Tru1I TTAA 8 cut(s) 186, 378, 402, 444, 516, 768, 1107, 1275
Tru9I TTAA 8 cut(s) 186, 378, 402, 444, 516, 768, 1107, 1275
TscAI CASTG 4 cut(s) 52, 174, 432, 1291
TseFI GTSAC 1 cut(s) 1265
TseI GCWGC 9 cut(s) 338, 341, 344, 557, 599, 674, 1211, 1229, 1349
Tsp45I GTSAC 1 cut(s) 1265
TspDTI ATGAA 5 cut(s) 402, 966, 1093, 1140, 1458
TspRI CASTG 4 cut(s) 52, 174, 432, 1291
Vha464I CTTAAG 1 cut(s) 1274
VpaK11BI GGWCC 3 cut(s) 101, 1062, 1096
XagI CCTNNNNNAGG 1 cut(s) 27
XceI RCATGY 2 cut(s) 700, 1343
XmaJI CCTAGG 1 cut(s) 896
XmiI GTMKAC 1 cut(s) 1146
XmnI GAANNNNTTC 1 cut(s) 127
XspI CTAG 4 cut(s) 323, 588, 897, 1154
ZrmI AGTACT 1 cut(s) 1385
Zsp2I ATGCAT 1 cut(s) 1176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.