Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007948.1

Orthogroup ID

OG0008065

Physical Location & Seq

Genomic Coordinates Reverse (-)

38647 .. 41829

Gene Structure 3183 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007948.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3183 bp

atggagtctcatagagtcagtttggtcatagtcatagtctgttctgttctacttgctggtctgtctgctcagccaagcttggaggttgaagtcgaggccttgaaggcattcaagaaatccatcaccagcgacccgaatggaacacttgcagattggacgtcagacgcaagccatcactgcaattggtctggcgttgcctgtgacccctcgacaaatcaagtcatttcaatttctctggcagaaaagcagctcacaggcgtgatctcacccttcctcggaaacatttcaggcctccaggttcttgatctaacttcaaactcattcactggacatattccagctgagctgggactttgctcccaactttctctacttgctctgtatcaaaattctctttcgggttcaattccaccagaactaggaaaccttagtaatctgcagttattagatttgggtgataaccttttgagtggaagcatgccggagagcatttgcaactgtagaaacttgtctttgtttggtgcggaatttaataacctcactggcaaactcccttcaaacataggaaatcttgttaatcttgagcttcttatagcaagtggcaacaactttgtaggctcattacctgcttccatgggtaagttggctgctttcaaagaggttgatttaagtaaaaaccagttgtccggtgcaatacctagggagctagggaatctgtcaaatttagaacaactggtagtgtttgataattcctttgttggggaaatcccttctgaactaagtcggtgtaagaagcttgttaaccttgaactttacgagaatcatttcaccggaagcattccctctgagcttggaagtttggttcatttagaaacattgagattgtacaagaataggctaaactctacaattccactctccatttttcagctgaaatcattaacccatttaggactttcagaaaatgagttaactgggacaataccatccgagcttggatctttaagatcattgcaagtattgaccctgcactccaataagtttaccggagagatcccctcatccttgacaagcttgacaaatctaacatatctgtcaatgagcttaaattctctaacaggggaacttccatcaaacatagggttgctttataatcttaaaaacctctccatgaatggcaaccttcttgagggatccataccatctagtatcaccaactgtaccaatcttcaagttataagcttggcttataatagaataactggaaaaatacctcagggtctggggcagttgccgaagcttaatttcctttctgttggatccaataaattgttcggagaaatcccagatgacctcttcaattgcactagtcttctcactctagatttgggcctgaacaactttagtggttatctgaaacccggatttggaaaactttccaatctcagggttttgagagccacctccaattcatttgtcggacaaattccaccagagattggccaactaaaccaacttatcatcctcacacttgctgagaatagattctcaggtccagttccaccacagctgtctaatctctctcacctacaagggctatccctgcacgacaatgctttagaaggagccatccctgagaaactttttgagctaaaagagctaactgttctagagttgcagcaaaacaaactgaccggtccaattccagatactggcacaaaacttgagttgctttcatatttaaacctccaaggtaatatgctcaatggttccattccgaaaagcatggctcaccttaatcggctaacgactctggatctctctcacaatcatctctcaggacccattccagggtctgtgatctcagggatgaaaagcatgcagatatatttgaatttctcatacaatttcttggatggcagcattccagacgagcttggcatgttggaaatggtgcaggccattgacatttccaacaataatctttcagggatgattcctgtagcactagaaggctgcaggaatttgtactctcttgatctgtcaggtaacaaactttcagggccaattcaagctgaagtttttgctaagatggacaccttcacaagcttgaacctttcaaggaatcacttagatggtgaactcccagaaaagttgacaaatctgaagcatcttagctcccttgatctttcccagaattttctgacgggagttatccgtgagagctttaccaattttaccagcttgaaacacttgaacctctctttcaatcaacttgaaggccctgttccagacaccggactattcagaagtataaatgcatccagcttggtaggaaacccggatctctgtggaaacaaactgctcaagacatgcaagaaaagttcacaccggatatccaagacaaccatgtatgttctcgtggcgcttggaataatttctctactgcttattttagtgatcattttcctaatccgcagccggttcaccaaaatgtgtaagccagaaaagattgaaaatccagaaccagagtgtgctgcagctttggcactcaagaggtttgatcaaaaggatttagaaaatgccactagtttctttagcaaagagaacattttaggcacaagcaggttgagtactgtgtacaagggtcaactggaagatgagcagatagtagccataaagagattgaatctccaggaattctcagttgagtcagataaatgcttcaatagagaaatcaagacactgagtcaactaaggcacaggaatttggtgaaggtacttggctatgcatgggagagtgggaaattaaaggccttggttctggaatacatggagaatggaaacctggagaacattatacatgaagatgggatgaatcagtggagattgacattctctcagagaatcaatattttaatctctatagcaagtggactggattacctgcattcaggatatgattttcccatcgttcattgcgacttgaagccttctaacatcttgttggatgaggattgggaggcccatgtgagtgattttggaacagctagaatgttgggtgttcatctccaggatgggagtagcctttccacggcatcagctttccaaggcacaattggctacttagcaccaggtgacattttgctggctattctcaattataaactcatctccatttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006898 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009595 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010359 GO:0012505 GO:0016020 GO:0016043 GO:0016045 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022898 GO:0023052 GO:0031410 GO:0031982 GO:0032409 GO:0032412 GO:0032879 GO:0033036 GO:0033037 GO:0033554 GO:0034762 GO:0034765 GO:0036211 GO:0038023 GO:0042545 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065009 GO:0070727 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098542 GO:0098543 GO:0098581 GO:0098657 GO:0140096 GO:1901564 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1060

Amino Acids

115.57

Weight (kDa)

5.7

Isoelectric Point (pI)

28.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46330 AT5G46330
fragaria_vesca	FvH4_3g06100
malus_domestica	MD05G1289000.v1.1
prunus_persica	Prupe.4G076500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0013311
rosa_laevigata	RLG00000032007 RLG00000032011
rosa_multiflora	Rmu_co8051088.1_g000001 Rmu_sc0003458.1_g000007 Rmu_sc0003458.1_g000011 Rmu_sc0004521.1_g000021 Rmu_sc0007948.1_g000008
rosa_roxburghii	Rroxscaffold_1G00063230
rosa_rugosa	Rorug05G0008800
rosa_samantha	Rh5AG103400 Rh5AG103500 Rh5AG104200 Rh5BG100200 Rh5CG111400 Rh5CG111800 Rh5DG099000
rosa_wichuraiana	Rw5G009030 Rw5G009070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	1152, 1238, 1251, 3165
AatII	GACGTC	1 cut(s)	161
Acc36I	ACCTGC	3 cut(s)	634, 2616, 2955
AccB7I	CCANNNNNTGG	2 cut(s)	1499, 1712
AciI	CCGC	2 cut(s)	524, 2476
AclWI	GGATC	8 cut(s)	1006, 1048, 1188, 1201, 1314, 1327, 1824, 2352
AcoI	YGGCCR	1 cut(s)	1501
AcuI	CTGAAG	2 cut(s)	2097, 2186
AcyI	GRCGYC	1 cut(s)	158
AdeI	CACNNNGTG	1 cut(s)	3137
AfaI	GTAC	6 cut(s)	887, 1222, 2030, 2635, 2642, 2781
AgeI	ACCGGT	1 cut(s)	1694
AhdI	GACNNNNNGTC	1 cut(s)	2748
AhlI	ACTAGT	2 cut(s)	1367, 2588
AjnI	CCWGG	6 cut(s)	294, 1849, 2694, 2847, 3072, 3133
AjuI	GAANNNNNNNTTGG	2 cut(s)	1316, 1348
AleI	CACNNNNGTG	1 cut(s)	257
AloI	GAACNNNNNNTCC	2 cut(s)	846, 878
Alw26I	GTCTC	1 cut(s)	12
AlwI	GGATC	8 cut(s)	1006, 1048, 1188, 1201, 1314, 1327, 1824, 2352
AlwNI	CAGNNNCTG	3 cut(s)	1282, 1712, 1856
AoxI	GGCC	9 cut(s)	96, 289, 1390, 1501, 1959, 2063, 2281, 2814, 3024
ApeKI	GCWGC	8 cut(s)	247, 647, 1678, 1920, 2016, 2478, 2537, 2540
AsiGI	ACCGGT	1 cut(s)	1694
Asp700I	GAANNNNTTC	6 cut(s)	107, 283, 824, 1435, 1544, 2437
AspA2I	CCTAGG	1 cut(s)	698
AspLEI	GCGC	1 cut(s)	2428
AspS9I	GGNCC	7 cut(s)	1390, 1553, 1697, 1841, 2063, 2282, 3025
AsuC2I	CCSGG	2 cut(s)	1422, 2342
AvaII	GGWCC	3 cut(s)	1553, 1697, 1841
AvrII	CCTAGG	1 cut(s)	698
AxyI	CCTNAGG	1 cut(s)	1275
BalI	TGGCCA	1 cut(s)	1503
BamHI	GGATCC	2 cut(s)	1193, 1319
BauI	CACGAG	1 cut(s)	2420
BbsI	GAAGAC	1 cut(s)	1364
BbvI	GCAGC	8 cut(s)	259, 634, 1690, 1932, 2003, 2490, 2524, 2552
BceAI	ACGGC	1 cut(s)	3111
BciT130I	CCWGG	6 cut(s)	296, 1851, 2696, 2849, 3074, 3135
BclI	TGATCA	2 cut(s)	2460, 2563
BcnI	CCSGG	2 cut(s)	1422, 2342
BcoDI	GTCTC	1 cut(s)	12
BcuI	ACTAGT	2 cut(s)	1367, 2588
BfmI	CTRYAG	6 cut(s)	437, 499, 2001, 2017, 2538, 2925
BfoI	RGCGCY	1 cut(s)	2429
BfuAI	ACCTGC	3 cut(s)	634, 2616, 2955
BglI	GCCNNNNNGGC	1 cut(s)	104
BisI	GCNGC	8 cut(s)	248, 648, 1679, 1921, 2017, 2479, 2538, 2541
BlnI	CCTAGG	1 cut(s)	698
BlpI	GCTNAGC	2 cut(s)	69, 342
BlsI	GCNGC	8 cut(s)	249, 649, 1680, 1922, 2018, 2480, 2539, 2542
BmcAI	AGTACT	1 cut(s)	2635
Bme1390I	CCNGG	8 cut(s)	296, 1422, 1851, 2342, 2696, 2849, 3074, 3135
Bme18I	GGWCC	3 cut(s)	1553, 1697, 1841
BmeRI	GACNNNNNGTC	1 cut(s)	2748
BmgT120I	GGNCC	7 cut(s)	1390, 1553, 1697, 1841, 2063, 2282, 3025
BmiI	GGNNCC	5 cut(s)	1195, 1321, 1627, 1771, 1843
BmrFI	CCNGG	8 cut(s)	296, 1422, 1851, 2342, 2696, 2849, 3074, 3135
BmrI	ACTGGG	1 cut(s)	984
BmsI	GCATC	3 cut(s)	2179, 2330, 3107
BmuI	ACTGGG	1 cut(s)	984
BpiI	GAAGAC	1 cut(s)	1364
BplI	GAGNNNNNCTC	2 cut(s)	1043, 1075
BpmI	CTGGAG	4 cut(s)	278, 2678, 2870, 3056
Bpu1102I	GCTNAGC	2 cut(s)	69, 342
BpuEI	CTTGAG	5 cut(s)	602, 1208, 1745, 2351, 2537
BpuMI	CCSGG	2 cut(s)	1422, 2342
BsaHI	GRCGYC	1 cut(s)	158
BsaJI	CCNNGG	8 cut(s)	274, 633, 698, 1750, 1850, 2817, 3093, 3109
BsaWI	WCCGGW	6 cut(s)	686, 830, 1046, 1694, 2297, 2391
Bse118I	RCCGGY	2 cut(s)	1694, 2481
Bse21I	CCTNAGG	1 cut(s)	1275
Bse3DI	GCAATG	2 cut(s)	1010, 2977
BseBI	CCWGG	6 cut(s)	296, 1851, 2696, 2849, 3074, 3135
BseDI	CCNNGG	8 cut(s)	274, 633, 698, 1750, 1850, 2817, 3093, 3109
BseMI	GCAATG	2 cut(s)	1010, 2977
BseXI	GCAGC	8 cut(s)	259, 634, 1690, 1932, 2003, 2490, 2524, 2552
BseYI	CCCAGC	1 cut(s)	346
BsgI	GTGCAG	3 cut(s)	1013, 1589, 1976
BshFI	GGCC	9 cut(s)	98, 291, 1392, 1503, 1961, 2065, 2283, 2816, 3026
BshTI	ACCGGT	1 cut(s)	1694
BslFI	GGGAC	2 cut(s)	363, 991
BsmAI	GTCTC	1 cut(s)	12
BsmFI	GGGAC	2 cut(s)	363, 991
BsmI	GAATGC	4 cut(s)	107, 837, 1923, 2950
BsnI	GGCC	9 cut(s)	98, 291, 1392, 1503, 1961, 2065, 2283, 2816, 3026
Bsp1407I	TGTACA	2 cut(s)	885, 2640
Bsp1720I	GCTNAGC	2 cut(s)	69, 342
Bsp19I	CCATGG	1 cut(s)	633
BspACI	CCGC	2 cut(s)	524, 2476
BspANI	GGCC	9 cut(s)	98, 291, 1392, 1503, 1961, 2065, 2283, 2816, 3026
BspLI	GGNNCC	5 cut(s)	1195, 1321, 1627, 1771, 1843
BspMAI	CTGCAG	3 cut(s)	441, 2021, 2542
BspMI	ACCTGC	3 cut(s)	634, 2616, 2955
BspPI	GGATC	8 cut(s)	1006, 1048, 1188, 1201, 1314, 1327, 1824, 2352
BsrDI	GCAATG	2 cut(s)	1010, 2977
BsrFI	RCCGGY	2 cut(s)	1694, 2481
BsrGI	TGTACA	2 cut(s)	885, 2640
BssAI	RCCGGY	2 cut(s)	1694, 2481
BssECI	CCNNGG	8 cut(s)	274, 633, 698, 1750, 1850, 2817, 3093, 3109
BssNI	GRCGYC	1 cut(s)	158
BssSI	CACGAG	1 cut(s)	2420
BssT1I	CCWWGG	5 cut(s)	633, 698, 1750, 2817, 3109
Bst2BI	CACGAG	1 cut(s)	2420
Bst2UI	CCWGG	6 cut(s)	296, 1851, 2696, 2849, 3074, 3135
Bst4CI	ACNGT	4 cut(s)	500, 1220, 1666, 2638
Bst6I	CTCTTC	1 cut(s)	1361
BstACI	GRCGYC	1 cut(s)	158
BstAUI	TGTACA	2 cut(s)	885, 2640
BstC8I	GCNNGC	5 cut(s)	169, 479, 1880, 1959, 3150
BstDSI	CCRYGG	2 cut(s)	633, 3093
BstENI	CCTNNNNNAGG	1 cut(s)	1187
BstH2I	RGCGCY	1 cut(s)	2429
BstHHI	GCGC	1 cut(s)	2428
BstMAI	GTCTC	1 cut(s)	12
BstMWI	GCNNNNNNNGC	6 cut(s)	104, 177, 1603, 1657, 2546, 3120
BstNI	CCWGG	6 cut(s)	296, 1851, 2696, 2849, 3074, 3135
BstNSI	RCATGY	4 cut(s)	481, 1882, 1945, 2376
BstSCI	CCNGG	8 cut(s)	294, 1420, 1849, 2340, 2694, 2847, 3072, 3133
BstSFI	CTRYAG	6 cut(s)	437, 499, 2001, 2017, 2538, 2925
BstV1I	GCAGC	8 cut(s)	259, 634, 1690, 1932, 2003, 2490, 2524, 2552
BstV2I	GAAGAC	1 cut(s)	1364
BstX2I	RGATCY	6 cut(s)	998, 1053, 1193, 1319, 1816, 2344
BstYI	RGATCY	6 cut(s)	998, 1053, 1193, 1319, 1816, 2344
Bsu36I	CCTNAGG	1 cut(s)	1275
BsuRI	GGCC	9 cut(s)	98, 291, 1392, 1503, 1961, 2065, 2283, 2816, 3026
BtgI	CCRYGG	2 cut(s)	633, 3093
BtsI	GCAGTG	1 cut(s)	175
BtsIMutI	CAGTG	5 cut(s)	175, 324, 540, 2744, 2888
BveI	ACCTGC	3 cut(s)	634, 2616, 2955
Cac8I	GCNNGC	5 cut(s)	169, 479, 1880, 1959, 3150
CaiI	CAGNNNCTG	3 cut(s)	1282, 1712, 1856
CfoI	GCGC	1 cut(s)	2428
Cfr10I	RCCGGY	2 cut(s)	1694, 2481
Cfr13I	GGNCC	7 cut(s)	1390, 1553, 1697, 1841, 2063, 2282, 3025
CseI	GACGC	1 cut(s)	173
CsiI	ACCWGGT	1 cut(s)	3133
Csp6I	GTAC	6 cut(s)	886, 1221, 2029, 2634, 2641, 2780
CspAI	ACCGGT	1 cut(s)	1694
CspCI	CAANNNNNGTGG	2 cut(s)	1387, 1422
CviQI	GTAC	6 cut(s)	886, 1221, 2029, 2634, 2641, 2780
DraI	TTTAAA	1 cut(s)	1743
DraIII	CACNNNGTG	1 cut(s)	3137
DriI	GACNNNNNGTC	1 cut(s)	2748
EaeI	YGGCCR	1 cut(s)	1501
Eam1104I	CTCTTC	1 cut(s)	1361
Eam1105I	GACNNNNNGTC	1 cut(s)	2748
EarI	CTCTTC	1 cut(s)	1361
Eco130I	CCWWGG	5 cut(s)	633, 698, 1750, 2817, 3109
Eco147I	AGGCCT	3 cut(s)	98, 291, 2816
Eco32I	GATATC	1 cut(s)	2397
Eco47I	GGWCC	3 cut(s)	1553, 1697, 1841
Eco57I	CTGAAG	2 cut(s)	2097, 2186
Eco81I	CCTNAGG	1 cut(s)	1275
EcoNI	CCTNNNNNAGG	1 cut(s)	1187
EcoO109I	RGGNCCY	2 cut(s)	1841, 2282
EcoRI	GAATTC	1 cut(s)	2699
EcoRII	CCWGG	6 cut(s)	294, 1849, 2694, 2847, 3072, 3133
EcoRV	GATATC	1 cut(s)	2397
EcoT14I	CCWWGG	5 cut(s)	633, 698, 1750, 2817, 3109
EcoT22I	ATGCAT	2 cut(s)	2323, 2794
ErhI	CCWWGG	5 cut(s)	633, 698, 1750, 2817, 3109
FalI	AAGNNNNNCTT	2 cut(s)	1231, 1263
FaqI	GGGAC	2 cut(s)	363, 991
FbaI	TGATCA	2 cut(s)	2460, 2563
Fnu4HI	GCNGC	8 cut(s)	248, 648, 1679, 1921, 2017, 2479, 2538, 2541
Fsp4HI	GCNGC	8 cut(s)	248, 648, 1679, 1921, 2017, 2479, 2538, 2541
GlaI	GCGC	1 cut(s)	2427
GluI	GCNGC	8 cut(s)	248, 648, 1679, 1921, 2017, 2479, 2538, 2541
GsaI	CCCAGC	1 cut(s)	350
GsuI	CTGGAG	4 cut(s)	278, 2678, 2870, 3056
HaeII	RGCGCY	1 cut(s)	2429
HaeIII	GGCC	9 cut(s)	98, 291, 1392, 1503, 1961, 2065, 2283, 2816, 3026
HgaI	GACGC	1 cut(s)	173
HhaI	GCGC	1 cut(s)	2428
Hin1I	GRCGYC	1 cut(s)	158
Hin6I	GCGC	1 cut(s)	2426
HinP1I	GCGC	1 cut(s)	2426
HincII	GTYRAC	5 cut(s)	802, 972, 2157, 2651, 2753
HindII	GTYRAC	5 cut(s)	802, 972, 2157, 2651, 2753
HindIII	AAGCTT	6 cut(s)	76, 794, 1072, 1240, 1298, 2107
HpaI	GTTAAC	2 cut(s)	802, 972
HpyCH4III	ACNGT	4 cut(s)	500, 1220, 1666, 2638
HpyCH4IV	ACGT	1 cut(s)	158
HpyF10VI	GCNNNNNNNGC	6 cut(s)	104, 177, 1603, 1657, 2546, 3120
HpySE526I	ACGT	1 cut(s)	158
Hsp92I	GRCGYC	1 cut(s)	158
HspAI	GCGC	1 cut(s)	2426
Ksp22I	TGATCA	2 cut(s)	2460, 2563
KspAI	GTTAAC	2 cut(s)	802, 972
LmnI	GCTCC	4 cut(s)	362, 703, 1625, 2183
Lsp1109I	GCAGC	8 cut(s)	259, 634, 1690, 1932, 2003, 2490, 2524, 2552
LweI	GCATC	3 cut(s)	2179, 2330, 3107
MabI	ACCWGGT	1 cut(s)	3133
MaeII	ACGT	1 cut(s)	158
MaeIII	GTNAC	3 cut(s)	200, 2048, 3137
MboII	GAAGA	5 cut(s)	1220, 1348, 1364, 2669, 2879
MfeI	CAATTG	3 cut(s)	181, 1360, 3117
MflI	RGATCY	6 cut(s)	998, 1053, 1193, 1319, 1816, 2344
MlsI	TGGCCA	1 cut(s)	1503
MluNI	TGGCCA	1 cut(s)	1503
MlyI	GAGTC	5 cut(s)	14, 24, 1804, 2720, 2758
MmeI	TCCRAC	5 cut(s)	1297, 1459, 1926, 1998, 2988
Mox20I	TGGCCA	1 cut(s)	1503
Mph1103I	ATGCAT	2 cut(s)	2323, 2794
MroXI	GAANNNNTTC	6 cut(s)	107, 283, 824, 1435, 1544, 2437
MscI	TGGCCA	1 cut(s)	1503
MslI	CAYNNNNRTG	6 cut(s)	257, 1611, 2133, 2492, 2868, 3033
Msp20I	TGGCCA	1 cut(s)	1503
MspA1I	CMGCKG	3 cut(s)	341, 931, 1570
MspR9I	CCNGG	8 cut(s)	296, 1422, 1851, 2342, 2696, 2849, 3074, 3135
MunI	CAATTG	3 cut(s)	181, 1360, 3117
Mva1269I	GAATGC	4 cut(s)	107, 837, 1923, 2950
MvaI	CCWGG	6 cut(s)	296, 1851, 2696, 2849, 3074, 3135
MwoI	GCNNNNNNNGC	6 cut(s)	104, 177, 1603, 1657, 2546, 3120
NciI	CCSGG	2 cut(s)	1422, 2342
NcoI	CCATGG	1 cut(s)	633
NlaIV	GGNNCC	5 cut(s)	1195, 1321, 1627, 1771, 1843
NmuCI	GTSAC	2 cut(s)	200, 3137
NsiI	ATGCAT	2 cut(s)	2323, 2794
NspI	RCATGY	4 cut(s)	481, 1882, 1945, 2376
OliI	CACNNNNGTG	1 cut(s)	257
PaeI	GCATGC	2 cut(s)	481, 1882
PceI	AGGCCT	3 cut(s)	98, 291, 2816
PcsI	WCGNNNNNNNCGW	1 cut(s)	2979
PctI	GAATGC	4 cut(s)	107, 837, 1923, 2950
PdmI	GAANNNNTTC	6 cut(s)	107, 283, 824, 1435, 1544, 2437
PfeI	GAWTC	8 cut(s)	712, 820, 1545, 1996, 2125, 2689, 2878, 2907
PflMI	CCANNNNNTGG	2 cut(s)	1499, 1712
PfoI	TCCNGGA	2 cut(s)	2694, 3072
PinAI	ACCGGT	1 cut(s)	1694
PkrI	GCNGC	8 cut(s)	249, 649, 1680, 1922, 2018, 2480, 2539, 2542
PleI	GAGTC	5 cut(s)	13, 23, 1804, 2719, 2757
PpsI	GAGTC	5 cut(s)	13, 23, 1804, 2719, 2757
PpuMI	RGGWCCY	1 cut(s)	1841
PsiI	TTATAA	4 cut(s)	1152, 1238, 1251, 3165
Psp5II	RGGWCCY	1 cut(s)	1841
Psp6I	CCWGG	6 cut(s)	294, 1849, 2694, 2847, 3072, 3133
PspFI	CCCAGC	1 cut(s)	346
PspGI	CCWGG	6 cut(s)	294, 1849, 2694, 2847, 3072, 3133
PspN4I	GGNNCC	5 cut(s)	1195, 1321, 1627, 1771, 1843
PspPI	GGNCC	7 cut(s)	1390, 1553, 1697, 1841, 2063, 2282, 3025
PspPPI	RGGWCCY	1 cut(s)	1841
PstI	CTGCAG	3 cut(s)	441, 2021, 2542
PstNI	CAGNNNCTG	3 cut(s)	1282, 1712, 1856
PsuI	RGATCY	6 cut(s)	998, 1053, 1193, 1319, 1816, 2344
PvuII	CAGCTG	3 cut(s)	341, 931, 1570
RsaI	GTAC	6 cut(s)	887, 1222, 2030, 2635, 2642, 2781
RsaNI	GTAC	6 cut(s)	886, 1221, 2029, 2634, 2641, 2780
RseI	CAYNNNNRTG	6 cut(s)	257, 1611, 2133, 2492, 2868, 3033
SatI	GCNGC	8 cut(s)	248, 648, 1679, 1921, 2017, 2479, 2538, 2541
Sau96I	GGNCC	7 cut(s)	1390, 1553, 1697, 1841, 2063, 2282, 3025
ScaI	AGTACT	1 cut(s)	2635
SchI	GAGTC	5 cut(s)	14, 24, 1804, 2720, 2758
ScrFI	CCNGG	8 cut(s)	296, 1422, 1851, 2342, 2696, 2849, 3074, 3135
SexAI	ACCWGGT	1 cut(s)	3133
SfaNI	GCATC	3 cut(s)	2179, 2330, 3107
SfcI	CTRYAG	6 cut(s)	437, 499, 2001, 2017, 2538, 2925
SinI	GGWCC	3 cut(s)	1553, 1697, 1841
SmiMI	CAYNNNNRTG	6 cut(s)	257, 1611, 2133, 2492, 2868, 3033
SmlI	CTYRAG	5 cut(s)	581, 1187, 1724, 2366, 2552
SmoI	CTYRAG	5 cut(s)	581, 1187, 1724, 2366, 2552
SpeI	ACTAGT	2 cut(s)	1367, 2588
SphI	GCATGC	2 cut(s)	481, 1882
SseBI	AGGCCT	3 cut(s)	98, 291, 2816
SsiI	CCGC	2 cut(s)	524, 2476
SspI	AATATT	1 cut(s)	2914
StuI	AGGCCT	3 cut(s)	98, 291, 2816
StyD4I	CCNGG	8 cut(s)	294, 1420, 1849, 2340, 2694, 2847, 3072, 3133
StyI	CCWWGG	5 cut(s)	633, 698, 1750, 2817, 3109
TaaI	ACNGT	4 cut(s)	500, 1220, 1666, 2638
TaiI	ACGT	1 cut(s)	161
TaqI	TCGA	2 cut(s)	93, 209
TatI	WGTACW	4 cut(s)	885, 2028, 2633, 2640
TfiI	GAWTC	8 cut(s)	712, 820, 1545, 1996, 2125, 2689, 2878, 2907
TscAI	CASTG	5 cut(s)	182, 331, 547, 2751, 2888
TseFI	GTSAC	2 cut(s)	200, 3137
TseI	GCWGC	8 cut(s)	247, 647, 1678, 1920, 2016, 2478, 2537, 2540
Tsp45I	GTSAC	2 cut(s)	200, 3137
TspDTI	ATGAA	9 cut(s)	854, 1187, 1461, 1725, 1886, 2880, 2891, 2966, 3056
TspGWI	ACGGA	1 cut(s)	2207
TspRI	CASTG	5 cut(s)	182, 331, 547, 2751, 2888
Van91I	CCANNNNNTGG	2 cut(s)	1499, 1712
VpaK11BI	GGWCC	3 cut(s)	1553, 1697, 1841
XagI	CCTNNNNNAGG	1 cut(s)	1187
XbaI	TCTAGA	2 cut(s)	1381, 1669
XceI	RCATGY	4 cut(s)	481, 1882, 1945, 2376
XcmI	CCANNNNNNNNNTGG	2 cut(s)	640, 3116
XmaJI	CCTAGG	1 cut(s)	698
XmnI	GAANNNNTTC	6 cut(s)	107, 283, 824, 1435, 1544, 2437
ZraI	GACGTC	1 cut(s)	159
ZrmI	AGTACT	1 cut(s)	2635
Zsp2I	ATGCAT	2 cut(s)	2323, 2794

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.