Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000486

Physical Location & Seq

Genomic Coordinates Forward (+)

494209 .. 498427

Gene Structure 4219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0008800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGAAGCAGGACACCCGGCTGCTAGTAAGACAGAGTTCACAGAGTGTTGGAGAACAACATGGAAGACCCCTTACATTTTGCGTCTCGCCCTCTCAGCTGGTATTGGAGGCCTCCTTTTCGGATACGATACAGGTGTGATTTCTGGGGCATTGCTGTACATTCGTGAGGACTTTCGTGAGGTTGAAAAGAAAACATGGCTGCAGGAGACAATTGTGAGTATGGCAGTTGCCGGCGCCATAATTGGTGCTGCAATTGGAGGATGGATGAACGATGCTATTGGCCGGAGAAAGTCAATCTTGTGTGCAGATTTTGTGTTCTTCCTTGGTGCAATAGTCATGGCTGTTGCACCAGCTCCGTGGGTGATCATAATTGGAAGAATTCTGGTTGGTTTGGGAGTGGGTATGGCTTCTATGACCTCACCACTATACATCTCAGAATCTTCTCCTGCTAGAATCCGGGGTGCTCTTGTTAGTACAAACGGTTTTCTAATTACTGGAGGTCAATTTTTGGCATACCTCATCAATCTTGCCTTCACCAAGGCTCCTGGAACCTGGCGTTGGATGCTTGGAGTGGCCGGAGTTCCTGCTGTGGTTCAGTTTGGATTGATGTGGTCACTCCCAGAGTCTCCAAGGTGGCTCTACAGAAAGAATAAGGTAGATGAAGCCAGGGCTATCTTAGAGAAAATTTACCCTGCGGATGAGGTTGAGAATGAAATGAAAGCATTGCACGAATCTGTTGAAATGGAAAAGGCTGAGGAAGGAGATGTTGGTGATGGCATCATAGCAAAACTAAAGGGTGCATTCAGCAACCCTGTGGTCCGAAGAGGACTCTATGCAGGGATCACAGTCCAAGTCGCTCAGCAATTTGTGGGTATCAACACTGTCATGTATTACAGCCCAACCATAGTTCAATTTGCTGGATTCGCATCCAACCAAACAGCAATGGCACTTTCTCTCATCACTTCTGGCCTCAATGTGGTTGGCACACTCATCAGCATGTGCTTTGTGGATAGATATGGAAGGAGAAGGCTTATGATCATTTCTATGGTTGGAATTATTATTTGTCTAGTGGTGTTATCTGTGGTGTTTTTCGAGGCAGCAGCTCAAGCTCCTCGTATTAGCAATTTGGAATCAACTCATTTTGGTAGTAACTCTACATGTCCGGCTTATGTGTCTGCCCCTAATCCAGCCTCATGGAACTGCATGACATGTTTGAAAGCTCAGTGCGGCTTCTGTGCTAATGGTGTCTCGGCTTATGCCCCGGGAGCTTGCGCGGCTTCAAATGTTGACTTGAAAAAGGCATGTGGTGGAGAACATCGTGTATGGTACACAAAAGGGTGTCCAAGCAGAATTGGATTCTTTGCAGTAATCCTTTTGGGATTGTACATCATTATCTACGCCCCTGGAATGGGAACTGTACCGTGGATTGTGAACTCAGAGATATACCCTTTGAGATACAGAGGCACATGTGGAGGGATTGCTGCAGTGTCTAATTGGAGTGCCAATCTGATTGTGAGTGAGACATTTTTAACCCTCACTCATGCTTTGGGATCTGCCGGCACGTTCCTCCTCTTTGCTGGGTTTTCTCTCATTGGACTCGTATTCATTTTCTTCTTGGTACCTGAAACTAAAGGGCTGCAATTTGAGGAGGTTGAGAAGTTGCTTAAGAAAGGCTACAGACCCAAGTTATTTGCTTCCAAGGACAAGGACACCAAGGAAACCAAGACTGTCGAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006898 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009595 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010359 GO:0012505 GO:0016020 GO:0016043 GO:0016045 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022898 GO:0023052 GO:0031410 GO:0031982 GO:0032409 GO:0032412 GO:0032879 GO:0033036 GO:0033037 GO:0033554 GO:0034762 GO:0034765 GO:0036211 GO:0038023 GO:0042545 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065009 GO:0070727 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098542 GO:0098543 GO:0098581 GO:0098657 GO:0140096 GO:1901564 GO:1903959

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

579

Amino Acids

62.66

Weight (kDa)

8.82

Isoelectric Point (pI)

32.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	30 - 364	7.1e-93	Sugar (and other) transporter
MFS_1	PF07690	35 - 363	9e-31	Major Facilitator Superfamily
Sugar_tr	PF00083	449 - 554	3.4e-27	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29735 AT4G09090 AT4G09462 AT4G09464 AT4G09465 AT4G09466 AT4G09467 AT5G53600 AT5G53610 AT5G63225 AT5G63230
fragaria_vesca	FvH4_3g06020 FvH4_3g06020 FvH4_3g06020 FvH4_3g06030 FvH4_3g06030 FvH4_3g06030 FvH4_3g06030 FvH4_3g06040 FvH4_4g08590 FvH4_6g37860
malus_domestica	MD10G1265100.v1.1
prunus_persica	Prupe.4G076700_v2.0.a1 Prupe.4G076900_v2.0.a1 Prupe.4G084600_v2.0.a1 Prupe.4G130100_v2.0.a1 Prupe.6G294200_v2.0.a1
pyrus_communis	pycom05g26640 pycom10g22110
rosa_chinensis	RchiOBHm_Chr5g0013281 RchiOBHm_Chr5g0013291 RchiOBHm_Chr5g0013321 RchiOBHm_Chr5g0013341 RchiOBHm_Chr5g0013351 RchiOBHm_Chr5g0013361 RchiOBHm_Chr5g0013371 RchiOBHm_Chr5g0013381 RchiOBHm_Chr5g0013391
rosa_laevigata	RLG00000032004 RLG00000032005 RLG00000032008 RLG00000032012 RLG00000032013 RLG00000032014 RLG00000032015 RLG00000032016
rosa_multiflora	Rmu_co8200260.1_g000001 Rmu_co8451143.1_g000001 Rmu_sc0003458.1_g000006 Rmu_sc0003458.1_g000008 Rmu_sc0003458.1_g000009 Rmu_sc0003458.1_g000012 Rmu_sc0003458.1_g000014 Rmu_sc0010713.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063160 Rroxscaffold_1G00063170 Rroxscaffold_1G00063180 Rroxscaffold_1G00063190 Rroxscaffold_1G00063200 Rroxscaffold_1G00063210
rosa_rugosa	Rorug05G0008700 Rorug05G0008700 Rorug05G0008800 Rorug05G0008800 Rorug05G0008900.1 Rorug05G0009000 Rorug05G0009000 Rorug05G0009000
rosa_samantha	Rh5AG103700 Rh5AG103800 Rh5AG104000 Rh5AG104300 Rh5AG104400 Rh5BG100300 Rh5BG100400 Rh5BG100500 Rh5BG100600 Rh5BG100700 Rh5CG111500 Rh5CG111600 Rh5CG112000 Rh5CG112200 Rh5CG112300 Rh5CG112500 Rh5DG099200 Rh5DG099300
rosa_wichuraiana	Rw5G009040 Rw5G009050 Rw5G009080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1618
AccB1I	GGYRCC	2 cut(s)	233, 1618
AccII	CGCG	1 cut(s)	1274
AciI	CCGC	3 cut(s)	695, 1227, 1274
AclWI	GGATC	2 cut(s)	848, 1558
AcoI	YGGCCR	2 cut(s)	280, 573
AcsI	RAATTY	2 cut(s)	378, 684
AcyI	GRCGYC	1 cut(s)	234
AdeI	CACNNNGTG	1 cut(s)	45
AfaI	GTAC	6 cut(s)	158, 475, 1328, 1385, 1419, 1620
AfiI	CCNNNNNNNGG	4 cut(s)	558, 976, 1408, 1409
AflII	CTTAAG	1 cut(s)	1664
AflIII	ACRYGT	3 cut(s)	1157, 1208, 1466
AgsI	TTSAA	6 cut(s)	185, 740, 911, 1216, 1281, 1294
AjnI	CCWGG	4 cut(s)	544, 551, 665, 1402
AjuI	GAANNNNNNNTTGG	4 cut(s)	541, 573, 750, 782
AluBI	AGCT	6 cut(s)	98, 353, 1103, 1109, 1220, 1268
AluI	AGCT	6 cut(s)	98, 353, 1103, 1109, 1220, 1268
Alw21I	GWGCWC	1 cut(s)	466
Alw26I	GTCTC	5 cut(s)	89, 200, 630, 1252, 1514
AlwI	GGATC	2 cut(s)	848, 1558
Ama87I	CYCGRG	1 cut(s)	1261
AoxI	GGCC	4 cut(s)	109, 280, 573, 967
ApeKI	GCWGC	7 cut(s)	20, 199, 248, 1097, 1100, 1481, 1636
ApoI	RAATTY	2 cut(s)	378, 684
Asp718I	GGTACC	1 cut(s)	1618
AspLEI	GCGC	2 cut(s)	236, 1274
AspS9I	GGNCC	1 cut(s)	817
AsuC2I	CCSGG	4 cut(s)	17, 458, 1262, 1263
AsuHPI	GGTGA	4 cut(s)	373, 411, 526, 782
AvaI	CYCGRG	1 cut(s)	1261
AvaII	GGWCC	1 cut(s)	817
BaeI	ACNNNNGTAYC	2 cut(s)	120, 153
BanI	GGYRCC	2 cut(s)	233, 1618
BarI	GAAGNNNNNNTAC	2 cut(s)	56, 88
BbsI	GAAGAC	1 cut(s)	71
Bbv12I	GWGCWC	1 cut(s)	466
BbvCI	CCTCAGC	1 cut(s)	753
BbvI	GCAGC	7 cut(s)	7, 186, 235, 1109, 1112, 1468, 1623
BccI	CCATC	2 cut(s)	255, 767
BciT130I	CCWGG	4 cut(s)	546, 553, 667, 1404
BciVI	GTATCC	1 cut(s)	116
BclI	TGATCA	2 cut(s)	363, 1035
BcnI	CCSGG	4 cut(s)	17, 458, 1262, 1263
BcoDI	GTCTC	5 cut(s)	89, 200, 630, 1252, 1514
BfaI	CTAG	3 cut(s)	24, 450, 1067
BfmI	CTRYAG	4 cut(s)	200, 640, 1482, 1675
BfoI	RGCGCY	1 cut(s)	237
BfrI	CTTAAG	1 cut(s)	1664
BfuI	GTATCC	1 cut(s)	116
BisI	GCNGC	9 cut(s)	21, 200, 249, 1098, 1101, 1228, 1275, 1482, 1637
BlpI	GCTNAGC	1 cut(s)	858
BlsI	GCNGC	9 cut(s)	22, 201, 250, 1099, 1102, 1229, 1276, 1483, 1638
Bme1390I	CCNGG	8 cut(s)	17, 458, 546, 553, 667, 1262, 1263, 1404
Bme18I	GGWCC	1 cut(s)	817
BmeT110I	CYCGRG	1 cut(s)	1261
BmgT120I	GGNCC	1 cut(s)	817
BmiI	GGNNCC	4 cut(s)	235, 543, 550, 1620
BmrFI	CCNGG	8 cut(s)	17, 458, 546, 553, 667, 1262, 1263, 1404
BmsI	GCATC	4 cut(s)	262, 552, 786, 935
BpiI	GAAGAC	1 cut(s)	71
BpmI	CTGGAG	1 cut(s)	516
Bpu10I	CCTNAGC	1 cut(s)	753
Bpu1102I	GCTNAGC	1 cut(s)	858
BpuEI	CTTGAG	1 cut(s)	1089
BpuMI	CCSGG	4 cut(s)	17, 458, 1262, 1263
BsaBI	GATNNNNATC	1 cut(s)	925
BsaHI	GRCGYC	1 cut(s)	234
BsaXI	ACNNNNNCTCC	2 cut(s)	526, 556
Bsc4I	CCNNNNNNNGG	4 cut(s)	558, 976, 1408, 1409
Bse118I	RCCGGY	2 cut(s)	230, 1556
Bse1I	ACTGG	1 cut(s)	499
Bse3DI	GCAATG	3 cut(s)	149, 722, 948
Bse8I	GATNNNNATC	1 cut(s)	925
BseBI	CCWGG	4 cut(s)	546, 553, 667, 1404
BseGI	GGATG	5 cut(s)	266, 270, 567, 703, 926
BseJI	GATNNNNATC	1 cut(s)	925
BseLI	CCNNNNNNNGG	4 cut(s)	558, 976, 1408, 1409
BseMI	GCAATG	3 cut(s)	149, 722, 948
BseMII	CTCAG	6 cut(s)	108, 447, 744, 872, 1235, 1449
BseNI	ACTGG	1 cut(s)	499
BseRI	GAGGAG	3 cut(s)	1101, 1559, 1661
BseXI	GCAGC	7 cut(s)	7, 186, 235, 1109, 1112, 1468, 1623
BseYI	CCCAGC	1 cut(s)	1577
BsgI	GTGCAG	1 cut(s)	324
Bsh1236I	CGCG	1 cut(s)	1274
BshFI	GGCC	4 cut(s)	111, 282, 575, 969
BshNI	GGYRCC	2 cut(s)	233, 1618
BsiHKAI	GWGCWC	1 cut(s)	466
BsiHKCI	CYCGRG	1 cut(s)	1261
BsiSI	CCGG	8 cut(s)	17, 231, 283, 457, 576, 1163, 1262, 1557
BslI	CCNNNNNNNGG	4 cut(s)	558, 976, 1408, 1409
BsmAI	GTCTC	5 cut(s)	89, 200, 630, 1252, 1514
BsmBI	CGTCTC	1 cut(s)	89
BsmI	GAATGC	1 cut(s)	800
BsnI	GGCC	4 cut(s)	111, 282, 575, 969
BsoBI	CYCGRG	1 cut(s)	1261
Bsp1286I	GDGCHC	1 cut(s)	466
Bsp1407I	TGTACA	2 cut(s)	156, 1383
Bsp143I	GATC	4 cut(s)	363, 840, 1035, 1550
Bsp1720I	GCTNAGC	1 cut(s)	858
BspACI	CCGC	3 cut(s)	695, 1227, 1274
BspANI	GGCC	4 cut(s)	111, 282, 575, 969
BspCNI	CTCAG	6 cut(s)	107, 446, 745, 871, 1234, 1448
BspFNI	CGCG	1 cut(s)	1274
BspLI	GGNNCC	4 cut(s)	235, 543, 550, 1620
BspMAI	CTGCAG	2 cut(s)	204, 1486
BspPI	GGATC	2 cut(s)	848, 1558
BspT107I	GGYRCC	2 cut(s)	233, 1618
BspTI	CTTAAG	1 cut(s)	1664
BsrDI	GCAATG	3 cut(s)	149, 722, 948
BsrFI	RCCGGY	2 cut(s)	230, 1556
BsrGI	TGTACA	2 cut(s)	156, 1383
BsrI	ACTGG	1 cut(s)	499
BssAI	RCCGGY	2 cut(s)	230, 1556
BssMI	GATC	4 cut(s)	363, 840, 1035, 1550
BssNI	GRCGYC	1 cut(s)	234
BssT1I	CCWWGG	5 cut(s)	322, 537, 629, 1698, 1713
Bst2UI	CCWGG	4 cut(s)	546, 553, 667, 1404
Bst4CI	ACNGT	6 cut(s)	482, 847, 883, 1417, 1422, 1729
Bst6I	CTCTTC	1 cut(s)	817
BstACI	GRCGYC	1 cut(s)	234
BstAFI	CTTAAG	1 cut(s)	1664
BstAUI	TGTACA	2 cut(s)	156, 1383
BstC8I	GCNNGC	3 cut(s)	232, 1270, 1558
BstDEI	CTNAG	7 cut(s)	94, 433, 676, 753, 858, 1221, 1435
BstDSI	CCRYGG	2 cut(s)	356, 1421
BstF5I	GGATG	5 cut(s)	266, 270, 567, 703, 926
BstFNI	CGCG	1 cut(s)	1274
BstH2I	RGCGCY	1 cut(s)	237
BstHHI	GCGC	2 cut(s)	236, 1274
BstKTI	GATC	4 cut(s)	366, 843, 1038, 1553
BstMAI	GTCTC	5 cut(s)	89, 200, 630, 1252, 1514
BstMBI	GATC	4 cut(s)	363, 840, 1035, 1550
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 562, 923, 1106, 1265, 1274
BstNI	CCWGG	4 cut(s)	546, 553, 667, 1404
BstNSI	RCATGY	5 cut(s)	1000, 1161, 1212, 1305, 1470
BstSCI	CCNGG	8 cut(s)	15, 456, 544, 551, 665, 1260, 1261, 1402
BstSFI	CTRYAG	4 cut(s)	200, 640, 1482, 1675
BstUI	CGCG	1 cut(s)	1274
BstV1I	GCAGC	7 cut(s)	7, 186, 235, 1109, 1112, 1468, 1623
BstV2I	GAAGAC	1 cut(s)	71
BstX2I	RGATCY	1 cut(s)	1550
BstXI	CCANNNNNNTGG	2 cut(s)	357, 1194
BstYI	RGATCY	1 cut(s)	1550
BsuI	GTATCC	1 cut(s)	116
BsuRI	GGCC	4 cut(s)	111, 282, 575, 969
BtgI	CCRYGG	2 cut(s)	356, 1421
BtsCI	GGATG	5 cut(s)	266, 270, 567, 703, 926
BtsI	GCAGTG	1 cut(s)	1491
BtsIMutI	CAGTG	3 cut(s)	879, 1229, 1491
Cac8I	GCNNGC	3 cut(s)	232, 1270, 1558
CfoI	GCGC	2 cut(s)	236, 1274
Cfr10I	RCCGGY	2 cut(s)	230, 1556
Cfr13I	GGNCC	1 cut(s)	817
Cfr9I	CCCGGG	1 cut(s)	1261
CseI	GACGC	1 cut(s)	71
Csp6I	GTAC	6 cut(s)	157, 474, 1327, 1384, 1418, 1619
CviQI	GTAC	6 cut(s)	157, 474, 1327, 1384, 1418, 1619
DdeI	CTNAG	7 cut(s)	94, 433, 676, 753, 858, 1221, 1435
DinI	GGCGCC	1 cut(s)	235
DpnI	GATC	4 cut(s)	365, 842, 1037, 1552
DpnII	GATC	4 cut(s)	363, 840, 1035, 1550
DraIII	CACNNNGTG	1 cut(s)	45
EaeI	YGGCCR	2 cut(s)	280, 573
Eam1104I	CTCTTC	1 cut(s)	817
EarI	CTCTTC	1 cut(s)	817
Eco130I	CCWWGG	5 cut(s)	322, 537, 629, 1698, 1713
Eco147I	AGGCCT	1 cut(s)	111
Eco47I	GGWCC	1 cut(s)	817
Eco88I	CYCGRG	1 cut(s)	1261
EcoRI	GAATTC	1 cut(s)	378
EcoRII	CCWGG	4 cut(s)	544, 551, 665, 1402
EcoT14I	CCWWGG	5 cut(s)	322, 537, 629, 1698, 1713
EgeI	GGCGCC	1 cut(s)	235
EheI	GGCGCC	1 cut(s)	235
ErhI	CCWWGG	5 cut(s)	322, 537, 629, 1698, 1713
Esp3I	CGTCTC	1 cut(s)	89
FalI	AAGNNNNNCTT	2 cut(s)	281, 313
FbaI	TGATCA	2 cut(s)	363, 1035
Fnu4HI	GCNGC	9 cut(s)	21, 200, 249, 1098, 1101, 1228, 1275, 1482, 1637
FokI	GGATG	5 cut(s)	273, 277, 574, 710, 913
Fsp4HI	GCNGC	9 cut(s)	21, 200, 249, 1098, 1101, 1228, 1275, 1482, 1637
FspBI	CTAG	3 cut(s)	24, 450, 1067
GlaI	GCGC	2 cut(s)	235, 1273
GluI	GCNGC	9 cut(s)	21, 200, 249, 1098, 1101, 1228, 1275, 1482, 1637
GsaI	CCCAGC	1 cut(s)	1581
GsuI	CTGGAG	1 cut(s)	516
HaeII	RGCGCY	1 cut(s)	237
HaeIII	GGCC	4 cut(s)	111, 282, 575, 969
HapII	CCGG	8 cut(s)	17, 231, 283, 457, 576, 1163, 1262, 1557
HgaI	GACGC	1 cut(s)	71
HhaI	GCGC	2 cut(s)	236, 1274
Hin1I	GRCGYC	1 cut(s)	234
Hin6I	GCGC	2 cut(s)	234, 1272
HinP1I	GCGC	2 cut(s)	234, 1272
HincII	GTYRAC	1 cut(s)	1288
HindII	GTYRAC	1 cut(s)	1288
HinfI	GANTC	9 cut(s)	437, 453, 623, 731, 828, 921, 1130, 1356, 1596
HpaII	CCGG	8 cut(s)	17, 231, 283, 457, 576, 1163, 1262, 1557
HphI	GGTGA	4 cut(s)	373, 411, 526, 782
Hpy166II	GTNNAC	4 cut(s)	39, 1288, 1329, 1432
Hpy188I	TCNGA	5 cut(s)	122, 436, 821, 1438, 1509
Hpy188III	TCNNGA	2 cut(s)	164, 176
Hpy8I	GTNNAC	4 cut(s)	39, 1288, 1329, 1432
HpyAV	CCTTC	4 cut(s)	541, 752, 1014, 1020
HpyCH4III	ACNGT	6 cut(s)	482, 847, 883, 1417, 1422, 1729
HpyCH4IV	ACGT	1 cut(s)	1562
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 562, 923, 1106, 1265, 1274
HpyF3I	CTNAG	7 cut(s)	94, 433, 676, 753, 858, 1221, 1435
HpySE526I	ACGT	1 cut(s)	1562
Hsp92I	GRCGYC	1 cut(s)	234
HspAI	GCGC	2 cut(s)	234, 1272
KasI	GGCGCC	1 cut(s)	233
KpnI	GGTACC	1 cut(s)	1622
KroI	GCCGGC	2 cut(s)	230, 1556
KroNI	GCCGGC	2 cut(s)	232, 1558
Ksp22I	TGATCA	2 cut(s)	363, 1035
Kzo9I	GATC	4 cut(s)	363, 840, 1035, 1550
LmnI	GCTCC	4 cut(s)	358, 547, 1114, 1265
Lsp1109I	GCAGC	7 cut(s)	7, 186, 235, 1109, 1112, 1468, 1623
LweI	GCATC	4 cut(s)	262, 552, 786, 935
MaeI	CTAG	3 cut(s)	24, 450, 1067
MaeII	ACGT	1 cut(s)	1562
MaeIII	GTNAC	2 cut(s)	612, 1148
MalI	GATC	4 cut(s)	365, 842, 1037, 1552
MboI	GATC	4 cut(s)	363, 840, 1035, 1550
MboII	GAAGA	6 cut(s)	76, 310, 387, 432, 834, 1603
MfeI	CAATTG	2 cut(s)	210, 252
MflI	RGATCY	1 cut(s)	1550
MhlI	GDGCHC	1 cut(s)	466
Mly113I	GGCGCC	1 cut(s)	234
MlyI	GAGTC	3 cut(s)	632, 822, 1590
MmeI	TCCRAC	4 cut(s)	29, 539, 954, 1030
MroNI	GCCGGC	2 cut(s)	230, 1556
MseI	TTAA	2 cut(s)	1529, 1665
MslI	CAYNNNNRTG	3 cut(s)	884, 995, 1043
MspA1I	CMGCKG	1 cut(s)	98
MspCI	CTTAAG	1 cut(s)	1664
MspI	CCGG	8 cut(s)	17, 231, 283, 457, 576, 1163, 1262, 1557
MspR9I	CCNGG	8 cut(s)	17, 458, 546, 553, 667, 1262, 1263, 1404
MunI	CAATTG	2 cut(s)	210, 252
Mva1269I	GAATGC	1 cut(s)	800
MvaI	CCWGG	4 cut(s)	546, 553, 667, 1404
MvnI	CGCG	1 cut(s)	1274
MwoI	GCNNNNNNNGC	6 cut(s)	95, 562, 923, 1106, 1265, 1274
NaeI	GCCGGC	2 cut(s)	232, 1558
NarI	GGCGCC	1 cut(s)	234
NciI	CCSGG	4 cut(s)	17, 458, 1262, 1263
NdeII	GATC	4 cut(s)	363, 840, 1035, 1550
NgoMIV	GCCGGC	2 cut(s)	230, 1556
NlaIV	GGNNCC	4 cut(s)	235, 543, 550, 1620
NmeAIII	GCCGAG	1 cut(s)	1229
NmuCI	GTSAC	1 cut(s)	612
NspI	RCATGY	5 cut(s)	1000, 1161, 1212, 1305, 1470
PceI	AGGCCT	1 cut(s)	111
PciI	ACATGT	3 cut(s)	1157, 1208, 1466
PctI	GAATGC	1 cut(s)	800
PdiI	GCCGGC	2 cut(s)	232, 1558
PfeI	GAWTC	6 cut(s)	437, 453, 731, 921, 1130, 1356
PfoI	TCCNGGA	1 cut(s)	544
PkrI	GCNGC	9 cut(s)	22, 201, 250, 1099, 1102, 1229, 1276, 1483, 1638
PleI	GAGTC	3 cut(s)	631, 822, 1590
PluTI	GGCGCC	1 cut(s)	237
PpsI	GAGTC	3 cut(s)	631, 822, 1590
PscI	ACATGT	3 cut(s)	1157, 1208, 1466
Psp6I	CCWGG	4 cut(s)	544, 551, 665, 1402
PspFI	CCCAGC	1 cut(s)	1577
PspGI	CCWGG	4 cut(s)	544, 551, 665, 1402
PspN4I	GGNNCC	4 cut(s)	235, 543, 550, 1620
PspPI	GGNCC	1 cut(s)	817
PstI	CTGCAG	2 cut(s)	204, 1486
PsuI	RGATCY	1 cut(s)	1550
PvuII	CAGCTG	1 cut(s)	98
RsaI	GTAC	6 cut(s)	158, 475, 1328, 1385, 1419, 1620
RsaNI	GTAC	6 cut(s)	157, 474, 1327, 1384, 1418, 1619
RseI	CAYNNNNRTG	3 cut(s)	884, 995, 1043
SaqAI	TTAA	2 cut(s)	1529, 1665
SatI	GCNGC	9 cut(s)	21, 200, 249, 1098, 1101, 1228, 1275, 1482, 1637
Sau3AI	GATC	4 cut(s)	363, 840, 1035, 1550
Sau96I	GGNCC	1 cut(s)	817
SchI	GAGTC	3 cut(s)	632, 822, 1590
ScrFI	CCNGG	8 cut(s)	17, 458, 546, 553, 667, 1262, 1263, 1404
SduI	GDGCHC	1 cut(s)	466
SfaNI	GCATC	4 cut(s)	262, 552, 786, 935
SfcI	CTRYAG	4 cut(s)	200, 640, 1482, 1675
SfoI	GGCGCC	1 cut(s)	235
SinI	GGWCC	1 cut(s)	817
SmaI	CCCGGG	1 cut(s)	1263
SmiMI	CAYNNNNRTG	3 cut(s)	884, 995, 1043
SmlI	CTYRAG	2 cut(s)	1104, 1664
SmoI	CTYRAG	2 cut(s)	1104, 1664
SseBI	AGGCCT	1 cut(s)	111
SsiI	CCGC	3 cut(s)	695, 1227, 1274
SspDI	GGCGCC	1 cut(s)	233
SspMI	CTAG	3 cut(s)	24, 450, 1067
StuI	AGGCCT	1 cut(s)	111
StyD4I	CCNGG	8 cut(s)	15, 456, 544, 551, 665, 1260, 1261, 1402
StyI	CCWWGG	5 cut(s)	322, 537, 629, 1698, 1713
TaaI	ACNGT	6 cut(s)	482, 847, 883, 1417, 1422, 1729
TaiI	ACGT	1 cut(s)	1565
TaqI	TCGA	2 cut(s)	1092, 1731
TatI	WGTACW	3 cut(s)	156, 473, 1383
TauI	GCSGC	2 cut(s)	1230, 1277
TfiI	GAWTC	6 cut(s)	437, 453, 731, 921, 1130, 1356
Tru1I	TTAA	2 cut(s)	1529, 1665
Tru9I	TTAA	2 cut(s)	1529, 1665
TscAI	CASTG	3 cut(s)	886, 1229, 1491
TseFI	GTSAC	1 cut(s)	612
TseI	GCWGC	7 cut(s)	20, 199, 248, 1097, 1100, 1481, 1636
Tsp45I	GTSAC	1 cut(s)	612
TspDTI	ATGAA	5 cut(s)	281, 675, 726, 731, 1594
TspGWI	ACGGA	1 cut(s)	345
TspMI	CCCGGG	1 cut(s)	1261
TspRI	CASTG	3 cut(s)	886, 1229, 1491
Vha464I	CTTAAG	1 cut(s)	1664
VpaK11BI	GGWCC	1 cut(s)	817
XapI	RAATTY	2 cut(s)	378, 684
XceI	RCATGY	5 cut(s)	1000, 1161, 1212, 1305, 1470
XmaI	CCCGGG	1 cut(s)	1261
XspI	CTAG	3 cut(s)	24, 450, 1067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.