Rorug05G0009000

Possibly involved in carbohydrate binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000486
Physical Location & Seq
Forward (+)
498932 .. 502005
3074 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0009000.1

Sequence Viewer

Length: 1746 bp
ATGGTGGAAGGAGGAGCACACCCCTCTAGTAAGACAGAATTCACAGAATGCTGGAAGACTACATGGCGGACGCCTTACATTATGCGCCTCGCGCTCTCTGCTGGCATTGGAGGCCTTCTTTTTGGATATGACACAGGTGTCATTTCTGGGGCGCTGCTATACATTCGTGAGGACTTTGACGAAGTTGACAAGAAAACATGGCTGCAAGAAACCATTGTGAGTATGGCAGTTGCAGGCGCTATCATTGGTGCTGCAATTGGAGGATGGATGAACGATGCCCTCGGCCGCAAGAAATCAATACTAATAGCAGATGTGGTGTTCTTTGTGGGTGCAATAGTTATGGCAGTGGCTCCAGCTCCTTGGGTGATCATCATTGGAAGAATCATAGTTGGTTTGGGAGTTGGAATGGCTTCCATGACCGCACCCCTTTACATTTCAGAAGCCTCTCCTCATAGAATCAGAGGAGCTCTTGTTAGTACAAATGGTCTTCTCATCACAGGAGGTCAGTTTTTGTCATACCTCATCAATCTGGCATTCACCAAGGCTCCTGGAACATGGCGTTGGATGCTTGGAGTTGCCGGTTTACCAGCTGTCGTTCAGTTTGTTTTGATGTTGTCACTCCCTGAGTCTCCAAGATGGCTCTACCGAGATAACAAGGTTGACGAAGCTAGGGCCATCTTAGCTAAAATCTACCCTCCAGAAGAGGTTGATGATGAAATGAAGGCCTTGCATGAATCCGTCGAATTCGAAAAGTCTGAGGAAGGAGCTATTGGGAAAACCATGATCGAAAAACTAAAGAGTTGTTTCGGCAACACCGTGGTCCGAAGAGGACTCTATGCAGGGATCACAGTCCAAGTCGCTCAGCAATTTGTGGGTATCAACACTGTCATGTATTACAGCCCAACCATAGTTCAATTTGCTGGATTCGCATCCAACCAAACAGCAATGGCACTTTCTCTCATCACTTCTGGCCTCAATGTGGTTGGCACACTCATCAGCATGTGCTTTGTGGATAGATATGGAAGGAGAAGGCTCATGATCATTTCCATGTTAGGAATCATCAGTTGCCTTATCGTGTTAGCTGGAGTGTTCTTCTATGCCGCATCTCATTCTCCAACTGTTAGCCACTTGGAATCCAATCACTTTGGCACCAACACTACATGTCCAGCTTATGTTTCTGCTACTAATCCGGCAGCATGGAACTGCATGACATGCTTGAAATCAACAGAATGCGCCTTCTGTGCTAGTAAAGTTGAAAATCTTGCCCCGGGAGCTTGTTTGGCTGCAAATGATAACATAAGGAGTCAATGTCGTGGAGAACATAGGGTATGGTACTCTAAAGGGTGTCCTAGCAAAATTGGTATCTTTGCAGTCATTTTGTTGGGATTGTACATCATTGTGTATGCACCTGGAATGGGAACTATTCCTTGGATTGTGAACTCAGAGATTTACCCATTGAGATACAGAGGCACTGGTGGAGGGATTGCTGCAGTTTCCAACTGGACGGCAAATCTCATAGTGAGTGAGACATACTTGACCCTCACCAAGGAACTGGGTTCGGCTGGAACTTTCCTCCTATTTGCTGGGTTTTCTACCATCGGGCTTATATTCATTTACTTCCTGGTTCCTGAAACCAAAGGAATGCAATTCGAAGAGGTCGAGAAGTTGCTTCAGAAGGGTTTCCGACCTAAGTTATTTGCTCCAAAGGACACCAAAGGCAAGCAGAAGGTTGAGGGGTCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
X8

Protein Analysis

581

Amino Acids

63.0

Weight (kDa)

8.68

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 31 - 370 9e-94 Sugar (and other) transporter
MFS_1 PF07690 36 - 367 2.6e-31 Major Facilitator Superfamily
Sugar_tr PF00083 451 - 556 1.5e-27 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000486)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29735 AT4G09090 AT4G09462 AT4G09464 AT4G09465 AT4G09466 AT4G09467 AT5G53600 AT5G53610 AT5G63225 AT5G63230
fragaria_vesca FvH4_3g06020 FvH4_3g06020 FvH4_3g06020 FvH4_3g06030 FvH4_3g06030 FvH4_3g06030 FvH4_3g06030 FvH4_3g06040 FvH4_4g08590 FvH4_6g37860
malus_domestica MD10G1265100.v1.1
prunus_persica Prupe.4G076700_v2.0.a1 Prupe.4G076900_v2.0.a1 Prupe.4G084600_v2.0.a1 Prupe.4G130100_v2.0.a1 Prupe.6G294200_v2.0.a1
pyrus_communis pycom05g26640 pycom10g22110
rosa_chinensis RchiOBHm_Chr5g0013281 RchiOBHm_Chr5g0013291 RchiOBHm_Chr5g0013321 RchiOBHm_Chr5g0013341 RchiOBHm_Chr5g0013351 RchiOBHm_Chr5g0013361 RchiOBHm_Chr5g0013371 RchiOBHm_Chr5g0013381 RchiOBHm_Chr5g0013391
rosa_laevigata RLG00000032004 RLG00000032005 RLG00000032008 RLG00000032012 RLG00000032013 RLG00000032014 RLG00000032015 RLG00000032016
rosa_multiflora Rmu_co8200260.1_g000001 Rmu_co8451143.1_g000001 Rmu_sc0003458.1_g000006 Rmu_sc0003458.1_g000008 Rmu_sc0003458.1_g000009 Rmu_sc0003458.1_g000012 Rmu_sc0003458.1_g000014 Rmu_sc0010713.1_g000001
rosa_roxburghii Rroxscaffold_1G00063160 Rroxscaffold_1G00063170 Rroxscaffold_1G00063180 Rroxscaffold_1G00063190 Rroxscaffold_1G00063200 Rroxscaffold_1G00063210
rosa_rugosa Rorug05G0008700 Rorug05G0008700 Rorug05G0008800 Rorug05G0008800 Rorug05G0008900.1 Rorug05G0009000 Rorug05G0009000 Rorug05G0009000
rosa_samantha Rh5AG103700 Rh5AG103800 Rh5AG104000 Rh5AG104300 Rh5AG104400 Rh5BG100300 Rh5BG100400 Rh5BG100500 Rh5BG100600 Rh5BG100700 Rh5CG111500 Rh5CG111600 Rh5CG112000 Rh5CG112200 Rh5CG112300 Rh5CG112500 Rh5DG099200 Rh5DG099300
rosa_wichuraiana Rw5G009040 Rw5G009050 Rw5G009080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 137
AccB1I GGYRCC 1 cut(s) 1148
AccII CGCG 1 cut(s) 92
AciI CCGC 4 cut(s) 67, 286, 420, 1101
AclWI GGATC 1 cut(s) 851
AcoI YGGCCR 1 cut(s) 283
AcsI RAATTY 2 cut(s) 38, 743
AcuI CTGAAG 1 cut(s) 1655
AcyI GRCGYC 1 cut(s) 71
AfaI GTAC 3 cut(s) 478, 1334, 1391
AfiI CCNNNNNNNGG 3 cut(s) 979, 1415, 1546
AflIII ACRYGT 1 cut(s) 1160
AgsI TTSAA 3 cut(s) 914, 1219, 1256
AjnI CCWGG 3 cut(s) 547, 1408, 1620
AjuI GAANNNNNNNTTGG 6 cut(s) 544, 576, 753, 785, 1411, 1443
AluBI AGCT 9 cut(s) 356, 467, 590, 668, 683, 767, 1082, 1169, 1274
AluI AGCT 9 cut(s) 356, 467, 590, 668, 683, 767, 1082, 1169, 1274
Alw21I GWGCWC 2 cut(s) 19, 469
Alw26I GTCTC 2 cut(s) 633, 1520
AlwI GGATC 1 cut(s) 851
Ama87I CYCGRG 1 cut(s) 1267
AoxI GGCC 5 cut(s) 112, 283, 672, 723, 970
ApeKI GCWGC 6 cut(s) 154, 202, 251, 1193, 1283, 1487
ApoI RAATTY 2 cut(s) 38, 743
Asp700I GAANNNNTTC 2 cut(s) 409, 1679
AspLEI GCGC 5 cut(s) 87, 94, 154, 239, 1235
AspS9I GGNCC 2 cut(s) 672, 820
AsuC2I CCSGG 2 cut(s) 1268, 1269
AsuHPI GGTGA 3 cut(s) 376, 529, 1534
AsuII TTCGAA 2 cut(s) 747, 1650
AvaI CYCGRG 1 cut(s) 1267
AvaII GGWCC 1 cut(s) 820
BanI GGYRCC 1 cut(s) 1148
BanII GRGCYC 1 cut(s) 469
BbsI GAAGAC 2 cut(s) 62, 479
Bbv12I GWGCWC 2 cut(s) 19, 469
BbvI GCAGC 6 cut(s) 141, 189, 238, 1205, 1270, 1474
BccI CCATC 4 cut(s) 258, 630, 683, 1604
BceAI ACGGC 1 cut(s) 1521
BciT130I CCWGG 3 cut(s) 549, 1410, 1622
BclI TGATCA 2 cut(s) 366, 1038
BcnI CCSGG 2 cut(s) 1268, 1269
BcoDI GTCTC 2 cut(s) 633, 1520
BfaI CTAG 4 cut(s) 27, 669, 1245, 1350
BfmI CTRYAG 1 cut(s) 1488
BfoI RGCGCY 2 cut(s) 155, 240
BisI GCNGC 8 cut(s) 155, 203, 252, 286, 1101, 1194, 1284, 1488
BlpI GCTNAGC 1 cut(s) 861
BlsI GCNGC 8 cut(s) 156, 204, 253, 287, 1102, 1195, 1285, 1489
Bme1390I CCNGG 5 cut(s) 549, 1268, 1269, 1410, 1622
Bme18I GGWCC 1 cut(s) 820
BmeT110I CYCGRG 1 cut(s) 1267
BmgT120I GGNCC 2 cut(s) 672, 820
BmiI GGNNCC 4 cut(s) 351, 546, 1150, 1626
BmrFI CCNGG 5 cut(s) 549, 1268, 1269, 1410, 1622
BmrI ACTGGG 1 cut(s) 1562
BmsI GCATC 4 cut(s) 265, 555, 938, 1112
BmuI ACTGGG 1 cut(s) 1562
BpiI GAAGAC 2 cut(s) 62, 479
BpmI CTGGAG 3 cut(s) 336, 681, 1104
Bpu1102I GCTNAGC 1 cut(s) 861
Bpu14I TTCGAA 2 cut(s) 747, 1650
BpuMI CCSGG 2 cut(s) 1268, 1269
BsaBI GATNNNNATC 1 cut(s) 928
BsaHI GRCGYC 1 cut(s) 71
BsaJI CCNNGG 8 cut(s) 280, 359, 540, 816, 1266, 1267, 1427, 1545
BsaXI ACNNNNNCTCC 6 cut(s) 456, 486, 529, 559, 1294, 1324
Bsc4I CCNNNNNNNGG 3 cut(s) 979, 1415, 1546
Bse118I RCCGGY 1 cut(s) 578
Bse1I ACTGG 3 cut(s) 1477, 1505, 1557
Bse3DI GCAATG 1 cut(s) 951
Bse8I GATNNNNATC 1 cut(s) 928
BseBI CCWGG 3 cut(s) 549, 1410, 1622
BseDI CCNNGG 8 cut(s) 280, 359, 540, 816, 1266, 1267, 1427, 1545
BseGI GGATG 4 cut(s) 269, 273, 570, 929
BseJI GATNNNNATC 1 cut(s) 928
BseLI CCNNNNNNNGG 3 cut(s) 979, 1415, 1546
BseMI GCAATG 1 cut(s) 951
BseMII CTCAG 4 cut(s) 615, 747, 875, 1455
BseNI ACTGG 3 cut(s) 1477, 1505, 1557
BseRI GAGGAG 3 cut(s) 27, 438, 477
BseX3I CGGCCG 1 cut(s) 283
BseXI GCAGC 6 cut(s) 141, 189, 238, 1205, 1270, 1474
BseYI CCCAGC 1 cut(s) 1583
Bsh1236I CGCG 1 cut(s) 92
Bsh1285I CGRYCG 1 cut(s) 286
BshFI GGCC 5 cut(s) 114, 285, 674, 725, 972
BshNI GGYRCC 1 cut(s) 1148
BsiEI CGRYCG 1 cut(s) 286
BsiHKAI GWGCWC 2 cut(s) 19, 469
BsiHKCI CYCGRG 1 cut(s) 1267
BsiSI CCGG 3 cut(s) 579, 1190, 1268
BslI CCNNNNNNNGG 3 cut(s) 979, 1415, 1546
BsmAI GTCTC 2 cut(s) 633, 1520
BsmI GAATGC 4 cut(s) 53, 533, 1235, 1647
BsnI GGCC 5 cut(s) 114, 285, 674, 725, 972
BsoBI CYCGRG 1 cut(s) 1267
Bsp119I TTCGAA 2 cut(s) 747, 1650
Bsp1286I GDGCHC 2 cut(s) 19, 469
Bsp1407I TGTACA 1 cut(s) 1389
Bsp143I GATC 4 cut(s) 366, 783, 843, 1038
Bsp1720I GCTNAGC 1 cut(s) 861
BspACI CCGC 4 cut(s) 67, 286, 420, 1101
BspANI GGCC 5 cut(s) 114, 285, 674, 725, 972
BspCNI CTCAG 4 cut(s) 616, 748, 874, 1454
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 1 cut(s) 1035
BspLI GGNNCC 4 cut(s) 351, 546, 1150, 1626
BspMAI CTGCAG 1 cut(s) 1492
BspPI GGATC 1 cut(s) 851
BspT104I TTCGAA 2 cut(s) 747, 1650
BspT107I GGYRCC 1 cut(s) 1148
BsrDI GCAATG 1 cut(s) 951
BsrFI RCCGGY 1 cut(s) 578
BsrGI TGTACA 1 cut(s) 1389
BsrI ACTGG 3 cut(s) 1477, 1505, 1557
BssAI RCCGGY 1 cut(s) 578
BssECI CCNNGG 8 cut(s) 280, 359, 540, 816, 1266, 1267, 1427, 1545
BssMI GATC 4 cut(s) 366, 783, 843, 1038
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 4 cut(s) 359, 540, 1427, 1545
Bst2UI CCWGG 3 cut(s) 549, 1410, 1622
Bst4CI ACNGT 4 cut(s) 817, 850, 886, 1120
Bst6I CTCTTC 3 cut(s) 696, 820, 1647
BstACI GRCGYC 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 1212
BstAUI TGTACA 1 cut(s) 1389
BstBI TTCGAA 2 cut(s) 747, 1650
BstC8I GCNNGC 3 cut(s) 103, 235, 1721
BstDEI CTNAG 6 cut(s) 624, 679, 756, 861, 1441, 1689
BstDSI CCRYGG 1 cut(s) 816
BstENI CCTNNNNNAGG 1 cut(s) 1544
BstF5I GGATG 4 cut(s) 269, 273, 570, 929
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 2 cut(s) 155, 240
BstHHI GCGC 5 cut(s) 87, 94, 154, 239, 1235
BstKTI GATC 4 cut(s) 369, 786, 846, 1041
BstMAI GTCTC 2 cut(s) 633, 1520
BstMBI GATC 4 cut(s) 366, 783, 843, 1038
BstMCI CGRYCG 1 cut(s) 286
BstNI CCWGG 3 cut(s) 549, 1410, 1622
BstNSI RCATGY 3 cut(s) 1003, 1164, 1215
BstSCI CCNGG 5 cut(s) 547, 1266, 1267, 1408, 1620
BstSFI CTRYAG 1 cut(s) 1488
BstUI CGCG 1 cut(s) 92
BstV1I GCAGC 6 cut(s) 141, 189, 238, 1205, 1270, 1474
BstV2I GAAGAC 2 cut(s) 62, 479
BstXI CCANNNNNNTGG 2 cut(s) 360, 1552
BstZI CGGCCG 1 cut(s) 283
BsuRI GGCC 5 cut(s) 114, 285, 674, 725, 972
BtgI CCRYGG 1 cut(s) 816
BtsCI GGATG 4 cut(s) 269, 273, 570, 929
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 3 cut(s) 351, 882, 1470
Cac8I GCNNGC 3 cut(s) 103, 235, 1721
CciI TCATGA 1 cut(s) 1035
CfoI GCGC 5 cut(s) 87, 94, 154, 239, 1235
Cfr10I RCCGGY 1 cut(s) 578
Cfr13I GGNCC 2 cut(s) 672, 820
Cfr9I CCCGGG 1 cut(s) 1267
CseI GACGC 1 cut(s) 79
Csp6I GTAC 3 cut(s) 477, 1333, 1390
CviQI GTAC 3 cut(s) 477, 1333, 1390
DdeI CTNAG 6 cut(s) 624, 679, 756, 861, 1441, 1689
DpnI GATC 4 cut(s) 368, 785, 845, 1040
DpnII GATC 4 cut(s) 366, 783, 843, 1038
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
EaeI YGGCCR 1 cut(s) 283
EagI CGGCCG 1 cut(s) 283
Eam1104I CTCTTC 3 cut(s) 696, 820, 1647
EarI CTCTTC 3 cut(s) 696, 820, 1647
EciI GGCGGA 1 cut(s) 82
Ecl136II GAGCTC 1 cut(s) 467
EclXI CGGCCG 1 cut(s) 283
Eco130I CCWWGG 4 cut(s) 359, 540, 1427, 1545
Eco147I AGGCCT 2 cut(s) 114, 725
Eco24I GRGCYC 1 cut(s) 469
Eco47I GGWCC 1 cut(s) 820
Eco52I CGGCCG 1 cut(s) 283
Eco53kI GAGCTC 1 cut(s) 467
Eco57I CTGAAG 1 cut(s) 1655
Eco88I CYCGRG 1 cut(s) 1267
EcoICRI GAGCTC 1 cut(s) 467
EcoNI CCTNNNNNAGG 1 cut(s) 1544
EcoRI GAATTC 2 cut(s) 38, 743
EcoRII CCWGG 3 cut(s) 547, 1408, 1620
EcoT14I CCWWGG 4 cut(s) 359, 540, 1427, 1545
EcoT38I GRGCYC 1 cut(s) 469
ErhI CCWWGG 4 cut(s) 359, 540, 1427, 1545
FbaI TGATCA 2 cut(s) 366, 1038
Fnu4HI GCNGC 8 cut(s) 155, 203, 252, 286, 1101, 1194, 1284, 1488
FokI GGATG 4 cut(s) 276, 280, 577, 916
FriOI GRGCYC 1 cut(s) 469
Fsp4HI GCNGC 8 cut(s) 155, 203, 252, 286, 1101, 1194, 1284, 1488
FspBI CTAG 4 cut(s) 27, 669, 1245, 1350
GlaI GCGC 5 cut(s) 86, 93, 153, 238, 1234
GluI GCNGC 8 cut(s) 155, 203, 252, 286, 1101, 1194, 1284, 1488
GsaI CCCAGC 1 cut(s) 1587
GsuI CTGGAG 3 cut(s) 336, 681, 1104
HaeII RGCGCY 2 cut(s) 155, 240
HaeIII GGCC 5 cut(s) 114, 285, 674, 725, 972
HapII CCGG 3 cut(s) 579, 1190, 1268
HgaI GACGC 1 cut(s) 79
HhaI GCGC 5 cut(s) 87, 94, 154, 239, 1235
Hin1I GRCGYC 1 cut(s) 71
Hin6I GCGC 5 cut(s) 85, 92, 152, 237, 1233
HinP1I GCGC 5 cut(s) 85, 92, 152, 237, 1233
HincII GTYRAC 2 cut(s) 187, 661
HindII GTYRAC 2 cut(s) 187, 661
HinfI GANTC 9 cut(s) 381, 456, 626, 734, 831, 924, 1056, 1133, 1303
HpaII CCGG 3 cut(s) 579, 1190, 1268
HphI GGTGA 3 cut(s) 376, 529, 1534
Hpy166II GTNNAC 4 cut(s) 187, 584, 661, 1438
Hpy188I TCNGA 7 cut(s) 439, 461, 757, 824, 1444, 1674, 1685
Hpy188III TCNNGA 5 cut(s) 167, 698, 1036, 1628, 1660
Hpy8I GTNNAC 4 cut(s) 187, 584, 661, 1438
Hpy99I CGWCG 1 cut(s) 743
HpyAV CCTTC 8 cut(s) 125, 715, 755, 1017, 1023, 1246, 1669, 1720
HpyCH4III ACNGT 4 cut(s) 817, 850, 886, 1120
HpyF3I CTNAG 6 cut(s) 624, 679, 756, 861, 1441, 1689
Hsp92I GRCGYC 1 cut(s) 71
HspAI GCGC 5 cut(s) 85, 92, 152, 237, 1233
Ksp22I TGATCA 2 cut(s) 366, 1038
Kzo9I GATC 4 cut(s) 366, 783, 843, 1038
LmnI GCTCC 8 cut(s) 14, 355, 361, 464, 550, 764, 1271, 1705
Lsp1109I GCAGC 6 cut(s) 141, 189, 238, 1205, 1270, 1474
LweI GCATC 4 cut(s) 265, 555, 938, 1112
MaeI CTAG 4 cut(s) 27, 669, 1245, 1350
MaeIII GTNAC 1 cut(s) 615
MalI GATC 4 cut(s) 368, 785, 845, 1040
MboI GATC 4 cut(s) 366, 783, 843, 1038
MboII GAAGA 7 cut(s) 67, 390, 479, 713, 837, 1084, 1664
MfeI CAATTG 1 cut(s) 255
MhlI GDGCHC 2 cut(s) 19, 469
MluCI AATT 7 cut(s) 38, 255, 743, 866, 914, 1356, 1646
MlyI GAGTC 3 cut(s) 635, 825, 1312
MmeI TCCRAC 6 cut(s) 382, 542, 957, 1139, 1521, 1708
MroXI GAANNNNTTC 2 cut(s) 409, 1679
MslI CAYNNNNRTG 4 cut(s) 887, 998, 1046, 1397
MspA1I CMGCKG 1 cut(s) 590
MspI CCGG 3 cut(s) 579, 1190, 1268
MspR9I CCNGG 5 cut(s) 549, 1268, 1269, 1410, 1622
MunI CAATTG 1 cut(s) 255
Mva1269I GAATGC 4 cut(s) 53, 533, 1235, 1647
MvaI CCWGG 3 cut(s) 549, 1410, 1622
MvnI CGCG 1 cut(s) 92
NciI CCSGG 2 cut(s) 1268, 1269
NdeII GATC 4 cut(s) 366, 783, 843, 1038
NlaIV GGNNCC 4 cut(s) 351, 546, 1150, 1626
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 1 cut(s) 615
NspI RCATGY 3 cut(s) 1003, 1164, 1215
NspV TTCGAA 2 cut(s) 747, 1650
PagI TCATGA 1 cut(s) 1035
PceI AGGCCT 2 cut(s) 114, 725
PciI ACATGT 1 cut(s) 1160
PcsI WCGNNNNNNNCGW 2 cut(s) 813, 1656
PctI GAATGC 4 cut(s) 53, 533, 1235, 1647
PdmI GAANNNNTTC 2 cut(s) 409, 1679
PfeI GAWTC 6 cut(s) 381, 456, 734, 924, 1056, 1133
PfoI TCCNGGA 1 cut(s) 547
PkrI GCNGC 8 cut(s) 156, 204, 253, 287, 1102, 1195, 1285, 1489
PleI GAGTC 3 cut(s) 634, 825, 1311
PpsI GAGTC 3 cut(s) 634, 825, 1311
PscI ACATGT 1 cut(s) 1160
Psp124BI GAGCTC 1 cut(s) 469
Psp6I CCWGG 3 cut(s) 547, 1408, 1620
PspFI CCCAGC 1 cut(s) 1583
PspGI CCWGG 3 cut(s) 547, 1408, 1620
PspN4I GGNNCC 4 cut(s) 351, 546, 1150, 1626
PspPI GGNCC 2 cut(s) 672, 820
PstI CTGCAG 1 cut(s) 1492
PvuII CAGCTG 1 cut(s) 590
RsaI GTAC 3 cut(s) 478, 1334, 1391
RsaNI GTAC 3 cut(s) 477, 1333, 1390
RseI CAYNNNNRTG 4 cut(s) 887, 998, 1046, 1397
SacI GAGCTC 1 cut(s) 469
SatI GCNGC 8 cut(s) 155, 203, 252, 286, 1101, 1194, 1284, 1488
Sau3AI GATC 4 cut(s) 366, 783, 843, 1038
Sau96I GGNCC 2 cut(s) 672, 820
SchI GAGTC 3 cut(s) 635, 825, 1312
ScrFI CCNGG 5 cut(s) 549, 1268, 1269, 1410, 1622
SduI GDGCHC 2 cut(s) 19, 469
SfaNI GCATC 4 cut(s) 265, 555, 938, 1112
SfcI CTRYAG 1 cut(s) 1488
SfuI TTCGAA 2 cut(s) 747, 1650
SinI GGWCC 1 cut(s) 820
SmaI CCCGGG 1 cut(s) 1269
SmiMI CAYNNNNRTG 4 cut(s) 887, 998, 1046, 1397
Sse9I AATT 7 cut(s) 38, 255, 743, 866, 914, 1356, 1646
SseBI AGGCCT 2 cut(s) 114, 725
SsiI CCGC 4 cut(s) 67, 286, 420, 1101
SspMI CTAG 4 cut(s) 27, 669, 1245, 1350
SstI GAGCTC 1 cut(s) 469
StuI AGGCCT 2 cut(s) 114, 725
StyD4I CCNGG 5 cut(s) 547, 1266, 1267, 1408, 1620
StyI CCWWGG 4 cut(s) 359, 540, 1427, 1545
TaaI ACNGT 4 cut(s) 817, 850, 886, 1120
TaqI TCGA 5 cut(s) 741, 747, 786, 1650, 1659
TasI AATT 7 cut(s) 38, 255, 743, 866, 914, 1356, 1646
TatI WGTACW 2 cut(s) 476, 1389
TauI GCSGC 2 cut(s) 288, 1103
TfiI GAWTC 6 cut(s) 381, 456, 734, 924, 1056, 1133
TscAI CASTG 3 cut(s) 351, 889, 1477
TseFI GTSAC 1 cut(s) 615
TseI GCWGC 6 cut(s) 154, 202, 251, 1193, 1283, 1487
Tsp45I GTSAC 1 cut(s) 615
TspDTI ATGAA 5 cut(s) 284, 729, 734, 747, 1600
TspGWI ACGGA 1 cut(s) 727
TspMI CCCGGG 1 cut(s) 1267
TspRI CASTG 3 cut(s) 351, 889, 1477
VpaK11BI GGWCC 1 cut(s) 820
XagI CCTNNNNNAGG 1 cut(s) 1544
XapI RAATTY 2 cut(s) 38, 743
XceI RCATGY 3 cut(s) 1003, 1164, 1215
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XmaI CCCGGG 1 cut(s) 1267
XmnI GAANNNNTTC 2 cut(s) 409, 1679
XspI CTAG 4 cut(s) 27, 669, 1245, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.