Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008966.1

Orthogroup ID

OG0003030

Physical Location & Seq

Genomic Coordinates Forward (+)

10 .. 5594

Gene Structure 5585 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008966.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

atggagtgggtttctactagtcaagcagaggcatcagctgtcataaatcatgattcaaagcatcagaatattttgaatacagaagcggatatctgtttgaagtctgatggtgggatttccttgttggcaaagagaacaactgctgctcaagatcagttgcatcaattcaggaacttcttaagccagcctatgactcaatcctcagttgttgggccatcgtgtgctactacaacgtctgtccatgctacttcagcacccatgtcaacaacttattgttctagtttgcatagtggttatcacgtgccagtagaacccttgaaggattctaatgtaaaccctcaaccatcaaatgctcctttaaggggcaccggtgcaatgtccaacccccagatagctgttgcagcccaaccttctacctctgcagttgatacccaaaatgaaggtaaggaatatgacctttctaaggagcaaaaaggctgcaagctgtcggagagtgaatatcaggaaaacccttctcttgccgatgtgaagcaaactgaagttgaatcgtatgcaggtgatcttgccaatgcacgatctcaggttactttgcccccaaatttatgttctaatacaaagtcagagccttcaaaatcagaaaaacaagaaaaggctgcaagtggtaaagttgttccagctcctcgtaaaaaaaataaagattctgacttgtttattaaagtaaatgggaagctctatcagaggcttggaaaaataggtagtggaggcagcagtgaggtccacaaagttatatcatcagactgtacaatctatgctcttaagaaaatcaagctgaaagggcgtgactatgccactgcttttgtattgagtggctccataaataataaagatggcagagtcaaggatgatgggtatatatacatggtacttgaatatggagaaattgatttggctcacatgctgtcccagaagtggaaggaaatggatgggtcgaatcagaccatagatgagaactggctacgattctactggcagcaaattcttctggcagtcagcaccatacatgaagagcgaattgtgcactctgacttgaagccagctaatttcctgcttgtcagaggctctcttaagctgattgattttgggattgctaaagctataatgagtgatacaaccaacatccaacgggattctcaggtgggtacgctaagctacatgtctccagaggcattcatgtgcaatgagactgatgcagatggaaacactatcaagtgtggccggccatcagacatttggtcccttggttgcatcctttatcagatggtatacgggaggaccccgtttgcagattacaagaccttctgggccaagttcaaagttataacagatcctaaccatcaaatttcatatgaaccagtccctaacccttggcttctggacctcatgagaaagtgccttgcctgggaccgcaatgaaagatggaggatccctgaactacttcagcacccttttcttgttcccccagttccaacccagccatcttctcatgatcacagctgtaaattgcttcaacttattggccaaaattgtaccagtgattctgaagcgtcgaagcttgtttgtcagcttaaacaactgcttgaagaccctttgccatccacaacgtctcacgacttgggttttcgcaacctaggtttcgatttggcggcggcgaacttccctcaggcaaggcaatctgtcctcaggcaaggcggcgatcgtggagggcaaagatgcgatggcgcggggcggggtctcggcgttgatcgtgcggtgcggcgcgaggtttctgggttggaggcctcgctgatcgtgttttttgctggattggatccggtcttcgagcaccgtacaacgtcgacgctgattgtcggctctgagcgcggcagtagtcaaggccggtggctgggatatgtagatggatgcttcgatctgaacgtcgccgttctgagacgtcgatcgaggttgttcttggagggtggtggttttcaggcggtgactcacggctattttcagccggctgttttcatccagacgtcggtggacgggttgatgagatgggcaggaaggccgccggaattgatggcggcgaagtggcagcagaggagctgggctcctgctaggtcttcctcgtgggcttgggtttgggtctctgggcctgggctcaacttcgggctgatggggcagaagaccttggtctctatgaaacaagcttccaagaaggagaaagtgaagagggtatttgctggtatgagctccaactcgaaaggggaggagcttgttatttactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0003674 GO:0003824 GO:0004672 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005813 GO:0005815 GO:0005856 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0015630 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0071704 GO:0098687 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Pkinase

Protein Analysis

775

Amino Acids

85.59

Weight (kDa)

8.53

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77720
fragaria_vesca	FvH4_2g26330 FvH4_2g26330 FvH4_2g26330 FvH4_2g26330 FvH4_2g26330 FvH4_2g26330 FvH4_2g26330
malus_domestica	MD15G1356500.v1.1
prunus_persica	Prupe.1G503700_v2.0.a1 Prupe.1G503700_v2.0.a1 Prupe.1G503700_v2.0.a1 Prupe.1G503700_v2.0.a1 Prupe.1G503700_v2.0.a1
pyrus_communis	pycom15g31860
rosa_chinensis	RchiOBHm_Chr6g0294911
rosa_laevigata	RLG00000011828 RLG00000019151
rosa_multiflora	Rmu_sc0000245.1_g000041 Rmu_sc0008966.1_g000001 Rmu_sc0021726.1_g000004 Rmu_sc0039793.1_g000001 Rmu_ssc0000227.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172850
rosa_rugosa	Rorug06G0247700 Rorug06G0247800 Rorug06G0247900 Rorug06G0248000 Rorug06G0248000 Rorug06G0248100 Rorug06G0248200
rosa_samantha	Rh5BG206500 Rh5BG222800 Rh6AG361400 Rh6BG368800 Rh6CG375400 Rh6DG361800
rosa_wichuraiana	Rw6G031510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1379
AarI	CACCTGC	1 cut(s)	545
AatII	GACGTC	2 cut(s)	1993, 2075
Acc36I	ACCTGC	1 cut(s)	545
AccB1I	GGYRCC	1 cut(s)	365
AccI	GTMKAC	2 cut(s)	1323, 1895
AccII	CGCG	3 cut(s)	1781, 1818, 1920
AclWI	GGATC	5 cut(s)	1379, 1477, 1490, 1862, 1875
AcoI	YGGCCR	3 cut(s)	1273, 1277, 1576
AcsI	RAATTY	3 cut(s)	598, 1035, 1398
AcuI	CTGAAG	4 cut(s)	234, 558, 1481, 1620
AcvI	CACGTG	1 cut(s)	301
AcyI	GRCGYC	2 cut(s)	1990, 2072
AfaI	GTAC	5 cut(s)	802, 924, 1201, 1588, 1888
AfiI	CCNNNNNNNGG	6 cut(s)	362, 463, 969, 1459, 1942, 2074
AflII	CTTAAG	3 cut(s)	178, 815, 1124
AflIII	ACRYGT	1 cut(s)	1212
AgeI	ACCGGT	1 cut(s)	368
AhdI	GACNNNNNGTC	1 cut(s)	1291
AhlI	ACTAGT	1 cut(s)	17
AjnI	CCWGG	2 cut(s)	1457, 2194
AjuI	GAANNNNNNNTTGG	2 cut(s)	589, 621
Alw21I	GWGCWC	3 cut(s)	1080, 1884, 2294
Alw26I	GTCTC	7 cut(s)	1221, 1235, 1668, 1796, 1981, 2191, 2239
Alw44I	GTGCAC	1 cut(s)	1076
AlwI	GGATC	5 cut(s)	1379, 1477, 1490, 1862, 1875
AoxI	GGCC	9 cut(s)	212, 1273, 1277, 1362, 1576, 1836, 1933, 2105, 2192
ApaLI	GTGCAC	1 cut(s)	1076
ApeKI	GCWGC	7 cut(s)	143, 401, 477, 653, 765, 1030, 2134
ApoI	RAATTY	3 cut(s)	598, 1035, 1398
AsiGI	ACCGGT	1 cut(s)	368
Asp700I	GAANNNNTTC	1 cut(s)	1494
AspA2I	CCTAGG	1 cut(s)	1687
AspLEI	GCGC	3 cut(s)	1781, 1818, 1920
AspS9I	GGNCC	8 cut(s)	212, 775, 1293, 1332, 1362, 1435, 1462, 2192
AsuHPI	GGTGA	2 cut(s)	569, 2044
AvaII	GGWCC	5 cut(s)	775, 1293, 1332, 1435, 1462
AvrII	CCTAGG	1 cut(s)	1687
AxyI	CCTNAGG	2 cut(s)	1719, 1739
BaeGI	GKGCMC	2 cut(s)	368, 1080
BalI	TGGCCA	1 cut(s)	1578
BamHI	GGATCC	2 cut(s)	1482, 1867
BanI	GGYRCC	1 cut(s)	365
BanII	GRGCYC	3 cut(s)	2152, 2202, 2294
BauI	CACGAG	1 cut(s)	2167
BbrPI	CACGTG	1 cut(s)	301
BbsI	GAAGAC	4 cut(s)	1647, 1867, 2154, 2231
Bbv12I	GWGCWC	3 cut(s)	1080, 1884, 2294
BbvI	GCAGC	7 cut(s)	130, 413, 464, 640, 777, 1042, 2146
BceAI	ACGGC	2 cut(s)	1964, 2056
BciT130I	CCWGG	2 cut(s)	1459, 2196
BclI	TGATCA	1 cut(s)	1546
BcoDI	GTCTC	7 cut(s)	1221, 1235, 1668, 1796, 1981, 2191, 2239
BcuI	ACTAGT	1 cut(s)	17
BfaI	CTAG	4 cut(s)	18, 279, 1688, 2157
BfmI	CTRYAG	1 cut(s)	420
BfrI	CTTAAG	3 cut(s)	178, 815, 1124
BfuAI	ACCTGC	1 cut(s)	545
BlnI	CCTAGG	1 cut(s)	1687
BlpI	GCTNAGC	1 cut(s)	1205
Bme1390I	CCNGG	2 cut(s)	1459, 2196
Bme18I	GGWCC	5 cut(s)	775, 1293, 1332, 1435, 1462
BmeRI	GACNNNNNGTC	1 cut(s)	1291
BmgT120I	GGNCC	8 cut(s)	212, 775, 1293, 1332, 1362, 1435, 1462, 2192
BmiI	GGNNCC	8 cut(s)	367, 871, 1295, 1334, 1463, 1484, 1869, 2151
BmrFI	CCNGG	2 cut(s)	1459, 2196
BmrI	ACTGGG	1 cut(s)	1514
BmsI	GCATC	7 cut(s)	41, 70, 169, 1237, 1314, 1760, 1949
BmuI	ACTGGG	1 cut(s)	1514
BoxI	GACNNNNGTC	1 cut(s)	2231
BpiI	GAAGAC	4 cut(s)	1647, 1867, 2154, 2231
BplI	GAGNNNNNCTC	2 cut(s)	2134, 2166
BpmI	CTGGAG	1 cut(s)	1203
Bpu1102I	GCTNAGC	1 cut(s)	1205
BpuEI	CTTGAG	1 cut(s)	132
BsaAI	YACGTR	1 cut(s)	301
BsaHI	GRCGYC	2 cut(s)	1990, 2072
BsaI	GGTCTC	3 cut(s)	1796, 2191, 2239
BsaJI	CCNNGG	6 cut(s)	1297, 1424, 1458, 1687, 2195, 2229
BsaWI	WCCGGW	2 cut(s)	368, 1870
Bsc4I	CCNNNNNNNGG	6 cut(s)	362, 463, 969, 1459, 1942, 2074
Bse118I	RCCGGY	4 cut(s)	368, 1275, 1935, 2053
Bse1I	ACTGG	6 cut(s)	305, 1016, 1031, 1412, 1520, 1590
Bse21I	CCTNAGG	2 cut(s)	1719, 1739
Bse3DI	GCAATG	3 cut(s)	381, 1243, 1474
BseBI	CCWGG	2 cut(s)	1459, 2196
BseDI	CCNNGG	6 cut(s)	1297, 1424, 1458, 1687, 2195, 2229
BseGI	GGATG	7 cut(s)	907, 988, 1176, 1305, 1652, 1964, 2064
BseLI	CCNNNNNNNGG	6 cut(s)	362, 463, 969, 1459, 1942, 2074
BseMI	GCAATG	3 cut(s)	381, 1243, 1474
BseMII	CTCAG	7 cut(s)	216, 593, 1205, 1733, 1753, 1905, 1976
BseNI	ACTGG	6 cut(s)	305, 1016, 1031, 1412, 1520, 1590
BseRI	GAGGAG	3 cut(s)	669, 2155, 2324
BseSI	GKGCMC	2 cut(s)	368, 1080
BseXI	GCAGC	7 cut(s)	130, 413, 464, 640, 777, 1042, 2146
BseYI	CCCAGC	3 cut(s)	1530, 1942, 2145
Bsh1236I	CGCG	3 cut(s)	1781, 1818, 1920
Bsh1285I	CGRYCG	2 cut(s)	1756, 1997
BshFI	GGCC	9 cut(s)	214, 1275, 1279, 1364, 1578, 1838, 1935, 2107, 2194
BshNI	GGYRCC	1 cut(s)	365
BshTI	ACCGGT	1 cut(s)	368
BsiEI	CGRYCG	2 cut(s)	1756, 1997
BsiHKAI	GWGCWC	3 cut(s)	1080, 1884, 2294
BsiSI	CCGG	6 cut(s)	369, 1276, 1871, 1936, 2054, 2111
BslFI	GGGAC	4 cut(s)	946, 1279, 1400, 1475
BslI	CCNNNNNNNGG	6 cut(s)	362, 463, 969, 1459, 1942, 2074
BsmAI	GTCTC	7 cut(s)	1221, 1235, 1668, 1796, 1981, 2191, 2239
BsmBI	CGTCTC	2 cut(s)	1668, 1981
BsmFI	GGGAC	4 cut(s)	946, 1279, 1400, 1475
BsmI	GAATGC	1 cut(s)	1226
BsnI	GGCC	9 cut(s)	214, 1275, 1279, 1364, 1578, 1838, 1935, 2107, 2194
Bso31I	GGTCTC	3 cut(s)	1796, 2191, 2239
Bsp1286I	GDGCHC	6 cut(s)	368, 1080, 1884, 2152, 2202, 2294
Bsp1407I	TGTACA	1 cut(s)	800
Bsp1720I	GCTNAGC	1 cut(s)	1205
BspANI	GGCC	9 cut(s)	214, 1275, 1279, 1364, 1578, 1838, 1935, 2107, 2194
BspCNI	CTCAG	7 cut(s)	215, 592, 1204, 1732, 1752, 1906, 1977
BspFNI	CGCG	3 cut(s)	1781, 1818, 1920
BspHI	TCATGA	3 cut(s)	49, 1440, 1543
BspLI	GGNNCC	8 cut(s)	367, 871, 1295, 1334, 1463, 1484, 1869, 2151
BspMAI	CTGCAG	1 cut(s)	424
BspMI	ACCTGC	1 cut(s)	545
BspPI	GGATC	5 cut(s)	1379, 1477, 1490, 1862, 1875
BspQI	GCTCTTC	1 cut(s)	1059
BspT107I	GGYRCC	1 cut(s)	365
BspTI	CTTAAG	3 cut(s)	178, 815, 1124
BspTNI	GGTCTC	3 cut(s)	1796, 2191, 2239
BsrDI	GCAATG	3 cut(s)	381, 1243, 1474
BsrFI	RCCGGY	4 cut(s)	368, 1275, 1935, 2053
BsrGI	TGTACA	1 cut(s)	800
BsrI	ACTGG	6 cut(s)	305, 1016, 1031, 1412, 1520, 1590
BssAI	RCCGGY	4 cut(s)	368, 1275, 1935, 2053
BssECI	CCNNGG	6 cut(s)	1297, 1424, 1458, 1687, 2195, 2229
BssNAI	GTATAC	1 cut(s)	1324
BssNI	GRCGYC	2 cut(s)	1990, 2072
BssSI	CACGAG	1 cut(s)	2167
BssT1I	CCWWGG	4 cut(s)	1297, 1424, 1687, 2229
Bst1107I	GTATAC	1 cut(s)	1324
Bst2BI	CACGAG	1 cut(s)	2167
Bst2UI	CCWGG	2 cut(s)	1459, 2196
Bst4CI	ACNGT	2 cut(s)	800, 1886
Bst6I	CTCTTC	2 cut(s)	1059, 2264
BstACI	GRCGYC	2 cut(s)	1990, 2072
BstAFI	CTTAAG	3 cut(s)	178, 815, 1124
BstAUI	TGTACA	1 cut(s)	800
BstBAI	YACGTR	1 cut(s)	301
BstC8I	GCNNGC	5 cut(s)	185, 482, 1095, 1277, 2055
BstDEI	CTNAG	9 cut(s)	202, 462, 579, 1191, 1205, 1719, 1739, 1914, 1985
BstENI	CCTNNNNNAGG	1 cut(s)	461
BstF5I	GGATG	7 cut(s)	907, 988, 1176, 1305, 1652, 1964, 2064
BstFNI	CGCG	3 cut(s)	1781, 1818, 1920
BstHHI	GCGC	3 cut(s)	1781, 1818, 1920
BstMAI	GTCTC	7 cut(s)	1221, 1235, 1668, 1796, 1981, 2191, 2239
BstMCI	CGRYCG	2 cut(s)	1756, 1997
BstMWI	GCNNNNNNNGC	6 cut(s)	251, 401, 835, 1075, 1917, 2218
BstNI	CCWGG	2 cut(s)	1459, 2196
BstNSI	RCATGY	2 cut(s)	958, 1216
BstPAI	GACNNNNGTC	1 cut(s)	2231
BstSCI	CCNGG	2 cut(s)	1457, 2194
BstSFI	CTRYAG	1 cut(s)	420
BstSLI	GKGCMC	2 cut(s)	368, 1080
BstUI	CGCG	3 cut(s)	1781, 1818, 1920
BstV1I	GCAGC	7 cut(s)	130, 413, 464, 640, 777, 1042, 2146
BstV2I	GAAGAC	4 cut(s)	1647, 1867, 2154, 2231
BstX2I	RGATCY	3 cut(s)	1384, 1482, 1867
BstYI	RGATCY	3 cut(s)	1384, 1482, 1867
BstZ17I	GTATAC	1 cut(s)	1324
Bsu36I	CCTNAGG	2 cut(s)	1719, 1739
BsuRI	GGCC	9 cut(s)	214, 1275, 1279, 1364, 1578, 1838, 1935, 2107, 2194
BtgZI	GCGATG	1 cut(s)	1788
BtsCI	GGATG	7 cut(s)	907, 988, 1176, 1305, 1652, 1964, 2064
BtsI	GCAGTG	2 cut(s)	775, 849
BtsIMutI	CAGTG	3 cut(s)	775, 849, 1597
BveI	ACCTGC	1 cut(s)	545
Cac8I	GCNNGC	5 cut(s)	185, 482, 1095, 1277, 2055
CciI	TCATGA	3 cut(s)	49, 1440, 1543
CfoI	GCGC	3 cut(s)	1781, 1818, 1920
Cfr10I	RCCGGY	4 cut(s)	368, 1275, 1935, 2053
Cfr13I	GGNCC	8 cut(s)	212, 775, 1293, 1332, 1362, 1435, 1462, 2192
CseI	GACGC	2 cut(s)	1593, 1906
Csp6I	GTAC	5 cut(s)	801, 923, 1200, 1587, 1887
CspAI	ACCGGT	1 cut(s)	368
CspCI	CAANNNNNGTGG	4 cut(s)	838, 873, 1919, 1954
CviQI	GTAC	5 cut(s)	801, 923, 1200, 1587, 1887
DdeI	CTNAG	9 cut(s)	202, 462, 579, 1191, 1205, 1719, 1739, 1914, 1985
DriI	GACNNNNNGTC	1 cut(s)	1291
EaeI	YGGCCR	3 cut(s)	1273, 1277, 1576
Eam1104I	CTCTTC	2 cut(s)	1059, 2264
Eam1105I	GACNNNNNGTC	1 cut(s)	1291
EarI	CTCTTC	2 cut(s)	1059, 2264
Ecl136II	GAGCTC	1 cut(s)	2292
Eco130I	CCWWGG	4 cut(s)	1297, 1424, 1687, 2229
Eco147I	AGGCCT	1 cut(s)	1838
Eco24I	GRGCYC	3 cut(s)	2152, 2202, 2294
Eco31I	GGTCTC	3 cut(s)	1796, 2191, 2239
Eco32I	GATATC	1 cut(s)	91
Eco47I	GGWCC	5 cut(s)	775, 1293, 1332, 1435, 1462
Eco53kI	GAGCTC	1 cut(s)	2292
Eco57I	CTGAAG	4 cut(s)	234, 558, 1481, 1620
Eco72I	CACGTG	1 cut(s)	301
Eco81I	CCTNAGG	2 cut(s)	1719, 1739
EcoICRI	GAGCTC	1 cut(s)	2292
EcoNI	CCTNNNNNAGG	1 cut(s)	461
EcoO109I	RGGNCCY	1 cut(s)	1332
EcoRII	CCWGG	2 cut(s)	1457, 2194
EcoRV	GATATC	1 cut(s)	91
EcoT14I	CCWWGG	4 cut(s)	1297, 1424, 1687, 2229
EcoT38I	GRGCYC	3 cut(s)	2152, 2202, 2294
ErhI	CCWWGG	4 cut(s)	1297, 1424, 1687, 2229
Esp3I	CGTCTC	2 cut(s)	1668, 1981
FaqI	GGGAC	4 cut(s)	946, 1279, 1400, 1475
FauI	CCCGC	2 cut(s)	1774, 1779
FauNDI	CATATG	1 cut(s)	1405
FbaI	TGATCA	1 cut(s)	1546
FblI	GTMKAC	2 cut(s)	1323, 1895
FokI	GGATG	7 cut(s)	914, 995, 1163, 1292, 1639, 1971, 2051
FriOI	GRGCYC	3 cut(s)	2152, 2202, 2294
FseI	GGCCGGCC	1 cut(s)	1279
FspBI	CTAG	4 cut(s)	18, 279, 1688, 2157
GlaI	GCGC	3 cut(s)	1780, 1817, 1919
GsaI	CCCAGC	3 cut(s)	1534, 1946, 2149
GsuI	CTGGAG	1 cut(s)	1203
HaeIII	GGCC	9 cut(s)	214, 1275, 1279, 1364, 1578, 1838, 1935, 2107, 2194
HapII	CCGG	6 cut(s)	369, 1276, 1871, 1936, 2054, 2111
HgaI	GACGC	2 cut(s)	1593, 1906
HhaI	GCGC	3 cut(s)	1781, 1818, 1920
Hin1I	GRCGYC	2 cut(s)	1990, 2072
Hin6I	GCGC	3 cut(s)	1779, 1816, 1918
HinP1I	GCGC	3 cut(s)	1779, 1816, 1918
HincII	GTYRAC	2 cut(s)	264, 1896
HindII	GTYRAC	2 cut(s)	264, 1896
HindIII	AAGCTT	2 cut(s)	1610, 2247
HpaII	CCGG	6 cut(s)	369, 1276, 1871, 1936, 2054, 2111
HphI	GGTGA	2 cut(s)	569, 2044
Hpy166II	GTNNAC	7 cut(s)	264, 334, 778, 1078, 1324, 1896, 2080
Hpy8I	GTNNAC	7 cut(s)	264, 334, 778, 1078, 1324, 1896, 2080
Hpy99I	CGWCG	6 cut(s)	1609, 1897, 1900, 1979, 1995, 2077
HpyAV	CCTTC	9 cut(s)	313, 420, 434, 522, 636, 967, 1366, 2097, 2251
HpyCH4III	ACNGT	2 cut(s)	800, 1886
HpyCH4IV	ACGT	7 cut(s)	233, 300, 1661, 1892, 1974, 1990, 2072
HpyF10VI	GCNNNNNNNGC	6 cut(s)	251, 401, 835, 1075, 1917, 2218
HpyF3I	CTNAG	9 cut(s)	202, 462, 579, 1191, 1205, 1719, 1739, 1914, 1985
HpySE526I	ACGT	7 cut(s)	233, 300, 1661, 1892, 1974, 1990, 2072
Hsp92I	GRCGYC	2 cut(s)	1990, 2072
HspAI	GCGC	3 cut(s)	1779, 1816, 1918
KroI	GCCGGC	2 cut(s)	1275, 2053
KroNI	GCCGGC	2 cut(s)	1277, 2055
Ksp22I	TGATCA	1 cut(s)	1546
LguI	GCTCTTC	1 cut(s)	1059
LmnI	GCTCC	8 cut(s)	358, 466, 682, 875, 2142, 2155, 2297, 2311
Lsp1109I	GCAGC	7 cut(s)	130, 413, 464, 640, 777, 1042, 2146
LweI	GCATC	7 cut(s)	41, 70, 169, 1237, 1314, 1760, 1949
MaeI	CTAG	4 cut(s)	18, 279, 1688, 2157
MaeII	ACGT	7 cut(s)	233, 300, 1661, 1892, 1974, 1990, 2072
MaeIII	GTNAC	3 cut(s)	583, 839, 2032
MboII	GAAGA	8 cut(s)	1031, 1076, 1530, 1652, 1867, 2154, 2236, 2281
MflI	RGATCY	3 cut(s)	1384, 1482, 1867
MhlI	GDGCHC	6 cut(s)	368, 1080, 1884, 2152, 2202, 2294
MlsI	TGGCCA	1 cut(s)	1578
MluNI	TGGCCA	1 cut(s)	1578
MlyI	GAGTC	3 cut(s)	187, 903, 2029
MmeI	TCCRAC	6 cut(s)	405, 468, 1204, 1550, 1812, 2319
Mox20I	TGGCCA	1 cut(s)	1578
MroNI	GCCGGC	2 cut(s)	1275, 2053
MroXI	GAANNNNTTC	1 cut(s)	1494
MscI	TGGCCA	1 cut(s)	1578
MseI	TTAA	6 cut(s)	179, 359, 714, 816, 1125, 1626
MslI	CAYNNNNRTG	1 cut(s)	1231
Msp20I	TGGCCA	1 cut(s)	1578
MspA1I	CMGCKG	2 cut(s)	38, 1554
MspCI	CTTAAG	3 cut(s)	178, 815, 1124
MspI	CCGG	6 cut(s)	369, 1276, 1871, 1936, 2054, 2111
MspR9I	CCNGG	2 cut(s)	1459, 2196
Mva1269I	GAATGC	1 cut(s)	1226
MvaI	CCWGG	2 cut(s)	1459, 2196
MvnI	CGCG	3 cut(s)	1781, 1818, 1920
MwoI	GCNNNNNNNGC	6 cut(s)	251, 401, 835, 1075, 1917, 2218
NaeI	GCCGGC	2 cut(s)	1277, 2055
NdeI	CATATG	1 cut(s)	1405
NgoMIV	GCCGGC	2 cut(s)	1275, 2053
NlaIV	GGNNCC	8 cut(s)	367, 871, 1295, 1334, 1463, 1484, 1869, 2151
NmeAIII	GCCGAG	1 cut(s)	1773
NmuCI	GTSAC	2 cut(s)	839, 2032
NspI	RCATGY	2 cut(s)	958, 1216
PagI	TCATGA	3 cut(s)	49, 1440, 1543
PaqCI	CACCTGC	1 cut(s)	545
PceI	AGGCCT	1 cut(s)	1838
PciI	ACATGT	1 cut(s)	1212
PciSI	GCTCTTC	1 cut(s)	1059
PcsI	WCGNNNNNNNCGW	1 cut(s)	1971
PctI	GAATGC	1 cut(s)	1226
PdiI	GCCGGC	2 cut(s)	1277, 2055
PdmI	GAANNNNTTC	1 cut(s)	1494
PfeI	GAWTC	8 cut(s)	53, 323, 545, 698, 991, 1020, 1187, 1595
PinAI	ACCGGT	1 cut(s)	368
Ple19I	CGATCG	2 cut(s)	1756, 1997
PleI	GAGTC	3 cut(s)	187, 902, 2029
PmaCI	CACGTG	1 cut(s)	301
PmlI	CACGTG	1 cut(s)	301
PpsI	GAGTC	3 cut(s)	187, 902, 2029
Ppu21I	YACGTR	1 cut(s)	301
PpuMI	RGGWCCY	1 cut(s)	1332
PscI	ACATGT	1 cut(s)	1212
PshAI	GACNNNNGTC	1 cut(s)	2231
PsiI	TTATAA	1 cut(s)	1379
Psp124BI	GAGCTC	1 cut(s)	2294
Psp5II	RGGWCCY	1 cut(s)	1332
Psp6I	CCWGG	2 cut(s)	1457, 2194
PspCI	CACGTG	1 cut(s)	301
PspFI	CCCAGC	3 cut(s)	1530, 1942, 2145
PspGI	CCWGG	2 cut(s)	1457, 2194
PspN4I	GGNNCC	8 cut(s)	367, 871, 1295, 1334, 1463, 1484, 1869, 2151
PspPI	GGNCC	8 cut(s)	212, 775, 1293, 1332, 1362, 1435, 1462, 2192
PspPPI	RGGWCCY	1 cut(s)	1332
PstI	CTGCAG	1 cut(s)	424
PsuI	RGATCY	3 cut(s)	1384, 1482, 1867
PvuI	CGATCG	2 cut(s)	1756, 1997
PvuII	CAGCTG	2 cut(s)	38, 1554
RigI	GGCCGGCC	1 cut(s)	1279
RsaI	GTAC	5 cut(s)	802, 924, 1201, 1588, 1888
RsaNI	GTAC	5 cut(s)	801, 923, 1200, 1587, 1887
RseI	CAYNNNNRTG	1 cut(s)	1231
SacI	GAGCTC	1 cut(s)	2294
SalI	GTCGAC	1 cut(s)	1894
SapI	GCTCTTC	1 cut(s)	1059
SaqAI	TTAA	6 cut(s)	179, 359, 714, 816, 1125, 1626
Sau96I	GGNCC	8 cut(s)	212, 775, 1293, 1332, 1362, 1435, 1462, 2192
SchI	GAGTC	3 cut(s)	187, 903, 2029
ScrFI	CCNGG	2 cut(s)	1459, 2196
SduI	GDGCHC	6 cut(s)	368, 1080, 1884, 2152, 2202, 2294
SfaNI	GCATC	7 cut(s)	41, 70, 169, 1237, 1314, 1760, 1949
SfcI	CTRYAG	1 cut(s)	420
SgrAI	CRCCGGYG	1 cut(s)	368
SgrDI	CGTCGACG	1 cut(s)	1894
SinI	GGWCC	5 cut(s)	775, 1293, 1332, 1435, 1462
SmiMI	CAYNNNNRTG	1 cut(s)	1231
SmlI	CTYRAG	4 cut(s)	147, 178, 815, 1124
SmoI	CTYRAG	4 cut(s)	147, 178, 815, 1124
SpeI	ACTAGT	1 cut(s)	17
SseBI	AGGCCT	1 cut(s)	1838
SspI	AATATT	1 cut(s)	70
SspMI	CTAG	4 cut(s)	18, 279, 1688, 2157
SstI	GAGCTC	1 cut(s)	2294
StuI	AGGCCT	1 cut(s)	1838
StyD4I	CCNGG	2 cut(s)	1457, 2194
StyI	CCWWGG	4 cut(s)	1297, 1424, 1687, 2229
TaaI	ACNGT	2 cut(s)	800, 1886
TaiI	ACGT	7 cut(s)	236, 303, 1664, 1895, 1977, 1993, 2075
TaqI	TCGA	9 cut(s)	989, 1607, 1695, 1878, 1895, 1965, 1993, 1997, 2300
TatI	WGTACW	1 cut(s)	800
TauI	GCSGC	7 cut(s)	1706, 1709, 1752, 1816, 1923, 2110, 2126
TfiI	GAWTC	8 cut(s)	53, 323, 545, 698, 991, 1020, 1187, 1595
Tru1I	TTAA	6 cut(s)	179, 359, 714, 816, 1125, 1626
Tru9I	TTAA	6 cut(s)	179, 359, 714, 816, 1125, 1626
TscAI	CASTG	3 cut(s)	775, 856, 1597
TseFI	GTSAC	2 cut(s)	839, 2032
TseI	GCWGC	7 cut(s)	143, 401, 477, 653, 765, 1030, 2134
Tsp45I	GTSAC	2 cut(s)	839, 2032
TspDTI	ATGAA	8 cut(s)	453, 1077, 1219, 1392, 1422, 1485, 2053, 2255
TspRI	CASTG	3 cut(s)	775, 856, 1597
Vha464I	CTTAAG	3 cut(s)	178, 815, 1124
VneI	GTGCAC	1 cut(s)	1076
VpaK11BI	GGWCC	5 cut(s)	775, 1293, 1332, 1435, 1462
XagI	CCTNNNNNAGG	1 cut(s)	461
XapI	RAATTY	3 cut(s)	598, 1035, 1398
XceI	RCATGY	2 cut(s)	958, 1216
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1287
XmaJI	CCTAGG	1 cut(s)	1687
XmiI	GTMKAC	2 cut(s)	1323, 1895
XmnI	GAANNNNTTC	1 cut(s)	1494
XspI	CTAG	4 cut(s)	18, 279, 1688, 2157
ZraI	GACGTC	2 cut(s)	1991, 2073

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.