Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003030

Physical Location & Seq

Genomic Coordinates Reverse (-)

39467668 .. 39473436

Gene Structure 5769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0247900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGGGTAAGGTAGTGGAGACGAAGAAGAAGAAGAAGAAAGGACGCCCCTCTCTTTTAGATCTCCAAAAACGGAATATCAGAGAGCAACAACACCACCTCCACCGCACCTCCAACAATTCCAATTCCACTTCTGCCCCTCGTTCCAACCCTATTTACACCCCTACTGCCCCTCCCACCACCACCGCCGCCAACCACAACCACAACCAGCCTCCGCTCCGTCGATCCACCCGCCGCAACCCCAACCCCGACGACGACGACGAGGATGACGAAGACGACGACGACGACGACTCCGACGGAAACGGCGGCGTTTCGGACGGGAAGCGCCGCGAGAAGAAACTCAAGCTGGTCCTCAAATTGCCGAAATCGTCCGCGAATTCGGCGTCGGTGAATTCCGGCGGGTCGGAGAATGACGACGACGACAACGCCGCGTCGGAGAGCGGCAAAAAGCGTAAGATCAATGCTATAGGGGGTGGATCTGGGCTCGCTCACCCGCCAAAGGGCGACAAGTCGATTCCTGCTACAAACCCTTCCTCAAGCACCCACCAAGGTGGGGTGAAGTTGGATTCTGGACCCTCGACTCCTTTACCCAATACAAAGCTGCTACTTTTCGTTCTTGAGAGGCTTCAAAAGAAGGACACCTATGGGGTGTTTTCTGAACCTGTGGACCCGGAAGAGCTTCCAGACTACCATGAAGTAATAGACAACCCTATGGATTTTGGGACAGTGAAGAAGAAACTTACTAGTGGAGCGTATGCCAGCTTGGAGCAGTTTGAGGATGACATTTTCTTAATTTGCTCGAATGCAATGCAGTACAATGCCCCAGATACTATATATTTTCGACAGGCGCGCTCCATCCATGAGCTTGCCAAAAAGAACTTTGAAAATTTGAGGCAAGATAGTGATGATAATGAACCAGAACCCAAGGTCGTAAGAAGGGGTAGACCACCGACCAAAAATTTGAAGAAACCACTTGGCAGGCCTTCCTTGGAGCGCGCTGGTTCAGAGTTCTCAGATGCCACTCTTGCCACTGGGGCAGAAAATGCCATATTGTCCAATTATGATCGTTCACGAAATAATGATGTGTATACTAGTTGGTTGGCTGATAACAAATTTGAGAGGAATGATGACTTAACAGGTTCCATGTTGAGAGGTAATTCCAAGACTGGGAGAAAGCAGTTTGTATTTGATGAGAACAGGCGTAATACATATCTACACTCTCATCCTTCAGCTAATGGACGAGAGTCAACTGTGTTGACTACATTTGATGGAGAAAGAAAACAGCTAATGCCTGTAGGGCTTCAGTCAGATGGTTATGGAAGGAGCCTGGCTCGATTTGCAGCGAATCTTGGACCTGTTGCTTGGAGAATTGCTGCACAAAGGATCCAAAGGTCTTTGCCTGCTGGTGTTAAGTTCGGCCCTGGGTGGGTTGGTGAAAATGATGTTGCTCCTCATAGGCCACTGGTATTAGCCTCATCCTCAAAAGAGCAGCCATCTTCACCACAGCCCATGCCCATTCGTGCAAACTCTTCTGCTGCGACATCTTGCTCTATCGAACCAAATAAAGATAAATTATCAGACAAACCTTCAGGTCATAACTTGTCAGAGAAACATGCCCCTTCTATTTCTTCAGGGCTGGATGACCATCCAAGCAGTCCTCCCCTACTGTCTGCTGCCACCTCATCAGATCCCTTAGTTGCTAACAGATCTCCTGAATCCCTCACAGGAAAAGGAGAAACTGTTGAAGGATCAAACTCTCGTGGTGGGATTAATATGATGAACAGTAATATTGGTGGAATCAGGCCTTCAAGGCCTCCTTTTCAGATCCATCAGACTCCTGAAATACAACCTGGGGTGAATGGATTGAATGGGACATATGGATTAAACCGTCCTGCTCAGGTAGGGAAACAAGTTGGCGTGACCAGGCCTGGTGGCTTCAGCTTCCAATCATCTCAAATGCTTGACCAAGTCTCCAGGACTAATACTAACTTGACTCATCCAGCGACTTCAAACAGCTTAAATTCAGAAGAAACCAAGGCCTCTAAAGATCCAGGTACAAAGCAGTCTTCTGGTTCATATTCAAATTCAGTGAAAAATGAGTCATTGCCAGCCCGAACATCGGGGCTTCTTCCCCGGTCATCTTGGCAAGGGTCATCCCAACAGATTAAACCTAATCCAGGATTCTCACCGCAACAGAAGCCTGACTCAGTTCCACCAGATCTGAACGTCAGATTTCAGTCACCAGGGTCCCCTAGTTCTAGCCGGGCTGATTCAACGCAGCCGGATTTAGCATTGCAGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0003674 GO:0003824 GO:0004672 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005813 GO:0005815 GO:0005856 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0015630 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0071704 GO:0098687 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Pkinase

Protein Analysis

766

Amino Acids

82.96

Weight (kDa)

9.09

Isoelectric Point (pI)

55.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	202 - 283	1.5e-24	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77720
fragaria_vesca	FvH4_2g26330 FvH4_2g26330 FvH4_2g26330 FvH4_2g26330 FvH4_2g26330 FvH4_2g26330 FvH4_2g26330
malus_domestica	MD15G1356500.v1.1
prunus_persica	Prupe.1G503700_v2.0.a1 Prupe.1G503700_v2.0.a1 Prupe.1G503700_v2.0.a1 Prupe.1G503700_v2.0.a1 Prupe.1G503700_v2.0.a1
pyrus_communis	pycom15g31860
rosa_chinensis	RchiOBHm_Chr6g0294911
rosa_laevigata	RLG00000011828 RLG00000019151
rosa_multiflora	Rmu_sc0000245.1_g000041 Rmu_sc0008966.1_g000001 Rmu_sc0021726.1_g000004 Rmu_sc0039793.1_g000001 Rmu_ssc0000227.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172850
rosa_rugosa	Rorug06G0247700 Rorug06G0247800 Rorug06G0247900 Rorug06G0248000 Rorug06G0248000 Rorug06G0248100 Rorug06G0248200
rosa_samantha	Rh5BG206500 Rh5BG222800 Rh6AG361400 Rh6BG368800 Rh6CG375400 Rh6DG361800
rosa_wichuraiana	Rw6G031510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	214, 438
AccI	GTMKAC	2 cut(s)	940, 1085
AccII	CGCG	5 cut(s)	327, 371, 428, 847, 993
AclWI	GGATC	8 cut(s)	216, 481, 1375, 1388, 1679, 1753, 1816, 2039
AcsI	RAATTY	7 cut(s)	373, 388, 883, 955, 1109, 2017, 2080
AcuI	CTGAAG	5 cut(s)	1209, 1283, 1569, 1611, 1918
AcyI	GRCGYC	2 cut(s)	43, 380
AfaI	GTAC	2 cut(s)	812, 2053
AfiI	CCNNNNNNNGG	7 cut(s)	496, 497, 550, 1164, 1423, 2116, 2174
AgsI	TTSAA	9 cut(s)	626, 881, 961, 1742, 1806, 1864, 2007, 2079, 2271
AhlI	ACTAGT	2 cut(s)	740, 1088
AjnI	CCWGG	9 cut(s)	1323, 1417, 1846, 1919, 1924, 1970, 2047, 2173, 2239
AleI	CACNNNNGTG	1 cut(s)	546
Alw26I	GTCTC	2 cut(s)	11, 1972
AlwI	GGATC	8 cut(s)	216, 481, 1375, 1388, 1679, 1753, 1816, 2039
AoxI	GGCC	7 cut(s)	977, 1414, 1454, 1799, 1808, 1922, 2034
ApeKI	GCWGC	8 cut(s)	598, 1337, 1370, 1486, 1532, 1670, 2275, 2293
ApoI	RAATTY	7 cut(s)	373, 388, 883, 955, 1109, 2017, 2080
ArsI	GACNNNNNNTTYG	4 cut(s)	365, 397, 940, 972
AseI	ATTAAT	1 cut(s)	1767
Asp700I	GAANNNNTTC	1 cut(s)	675
AspLEI	GCGC	5 cut(s)	324, 847, 849, 993, 995
AspS9I	GGNCC	6 cut(s)	346, 569, 664, 1349, 1415, 2244
AsuC2I	CCSGG	3 cut(s)	668, 2131, 2261
AsuHPI	GGTGA	8 cut(s)	397, 479, 565, 1442, 1488, 1864, 2175, 2229
AvaII	GGWCC	5 cut(s)	346, 569, 664, 1349, 2244
BamHI	GGATCC	1 cut(s)	1380
BanII	GRGCYC	1 cut(s)	483
BauI	CACGAG	1 cut(s)	1755
BbsI	GAAGAC	2 cut(s)	276, 2055
BbvI	GCAGC	7 cut(s)	585, 1349, 1357, 1498, 1519, 1657, 2287
BccI	CCATC	6 cut(s)	860, 1259, 1301, 1498, 1650, 1833
BceAI	ACGGC	1 cut(s)	316
BcgI	CGANNNNNNTGC	2 cut(s)	787, 821
BciT130I	CCWGG	9 cut(s)	1325, 1419, 1848, 1921, 1926, 1972, 2049, 2175, 2241
BcnI	CCSGG	3 cut(s)	668, 2131, 2261
BcoDI	GTCTC	2 cut(s)	11, 1972
BcuI	ACTAGT	2 cut(s)	740, 1088
BfaI	CTAG	4 cut(s)	741, 1089, 2250, 2256
BfmI	CTRYAG	2 cut(s)	462, 1290
BfoI	RGCGCY	1 cut(s)	325
BglI	GCCNNNNNGGC	3 cut(s)	1031, 1294, 1807
BglII	AGATCT	3 cut(s)	58, 1703, 2215
Bme18I	GGWCC	5 cut(s)	346, 569, 664, 1349, 2244
BmgT120I	GGNCC	6 cut(s)	346, 569, 664, 1349, 1415, 2244
BmiI	GGNNCC	7 cut(s)	571, 666, 1138, 1322, 1382, 2245, 2246
BmrI	ACTGGG	2 cut(s)	1038, 1173
BmsI	GCATC	1 cut(s)	1003
BmuI	ACTGGG	2 cut(s)	1038, 1173
BoxI	GACNNNNGTC	1 cut(s)	1240
BpiI	GAAGAC	2 cut(s)	276, 2055
BplI	GAGNNNNNCTC	2 cut(s)	1312, 1344
BpmI	CTGGAG	1 cut(s)	1954
Bpu10I	CCTNAGC	1 cut(s)	1893
BpuEI	CTTGAG	3 cut(s)	323, 517, 635
BpuMI	CCSGG	3 cut(s)	668, 2131, 2261
BsaBI	GATNNNNATC	1 cut(s)	1641
BsaHI	GRCGYC	2 cut(s)	43, 380
BsaJI	CCNNGG	9 cut(s)	544, 921, 984, 1417, 1418, 1847, 2031, 2129, 2240
Bsc4I	CCNNNNNNNGG	7 cut(s)	496, 497, 550, 1164, 1423, 2116, 2174
Bse1I	ACTGG	3 cut(s)	1033, 1168, 1464
Bse3DI	GCAATG	3 cut(s)	810, 2099, 2288
Bse8I	GATNNNNATC	1 cut(s)	1641
BseBI	CCWGG	9 cut(s)	1325, 1419, 1848, 1921, 1926, 1972, 2049, 2175, 2241
BseDI	CCNNGG	9 cut(s)	544, 921, 984, 1417, 1418, 1847, 2031, 2129, 2240
BseGI	GGATG	9 cut(s)	268, 781, 852, 1219, 1472, 1642, 1642, 1993, 2150
BseJI	GATNNNNATC	1 cut(s)	1641
BseLI	CCNNNNNNNGG	7 cut(s)	496, 497, 550, 1164, 1423, 2116, 2174
BseMI	GCAATG	3 cut(s)	810, 2099, 2288
BseMII	CTCAG	3 cut(s)	1023, 1907, 2217
BseNI	ACTGG	3 cut(s)	1033, 1168, 1464
BsePI	GCGCGC	2 cut(s)	845, 991
BseRI	GAGGAG	1 cut(s)	1437
BseXI	GCAGC	7 cut(s)	585, 1349, 1357, 1498, 1519, 1657, 2287
BsgI	GTGCAG	1 cut(s)	1356
Bsh1236I	CGCG	5 cut(s)	327, 371, 428, 847, 993
BshFI	GGCC	7 cut(s)	979, 1416, 1456, 1801, 1810, 1924, 2036
BsiSI	CCGG	5 cut(s)	393, 668, 2131, 2260, 2279
BslFI	GGGAC	3 cut(s)	733, 1882, 2230
BslI	CCNNNNNNNGG	7 cut(s)	496, 497, 550, 1164, 1423, 2116, 2174
BsmAI	GTCTC	2 cut(s)	11, 1972
BsmBI	CGTCTC	1 cut(s)	11
BsmFI	GGGAC	3 cut(s)	733, 1882, 2230
BsmI	GAATGC	1 cut(s)	805
BsnI	GGCC	7 cut(s)	979, 1416, 1456, 1801, 1810, 1924, 2036
Bsp1286I	GDGCHC	1 cut(s)	483
BspANI	GGCC	7 cut(s)	979, 1416, 1456, 1801, 1810, 1924, 2036
BspCNI	CTCAG	3 cut(s)	1022, 1906, 2216
BspFNI	CGCG	5 cut(s)	327, 371, 428, 847, 993
BspLI	GGNNCC	7 cut(s)	571, 666, 1138, 1322, 1382, 2245, 2246
BspPI	GGATC	8 cut(s)	216, 481, 1375, 1388, 1679, 1753, 1816, 2039
BspQI	GCTCTTC	1 cut(s)	666
BsrBI	CCGCTC	2 cut(s)	214, 438
BsrDI	GCAATG	3 cut(s)	810, 2099, 2288
BsrI	ACTGG	3 cut(s)	1033, 1168, 1464
BssECI	CCNNGG	9 cut(s)	544, 921, 984, 1417, 1418, 1847, 2031, 2129, 2240
BssHII	GCGCGC	2 cut(s)	845, 991
BssNAI	GTATAC	1 cut(s)	1086
BssNI	GRCGYC	2 cut(s)	43, 380
BssSI	CACGAG	1 cut(s)	1755
BssT1I	CCWWGG	4 cut(s)	544, 921, 984, 2031
Bst1107I	GTATAC	1 cut(s)	1086
Bst2BI	CACGAG	1 cut(s)	1755
Bst2UI	CCWGG	9 cut(s)	1325, 1419, 1848, 1921, 1926, 1972, 2049, 2175, 2241
Bst4CI	ACNGT	6 cut(s)	724, 1249, 1665, 1738, 1781, 1886
Bst6I	CTCTTC	2 cut(s)	666, 1531
BstACI	GRCGYC	2 cut(s)	43, 380
BstAPI	GCANNNNNTGC	1 cut(s)	1040
BstC8I	GCNNGC	8 cut(s)	483, 757, 847, 864, 977, 993, 1398, 2106
BstDEI	CTNAG	4 cut(s)	1009, 1690, 1893, 2203
BstENI	CCTNNNNNAGG	1 cut(s)	2172
BstF5I	GGATG	9 cut(s)	268, 781, 852, 1219, 1472, 1642, 1642, 1993, 2150
BstFNI	CGCG	5 cut(s)	327, 371, 428, 847, 993
BstH2I	RGCGCY	1 cut(s)	325
BstHHI	GCGC	5 cut(s)	324, 847, 849, 993, 995
BstMAI	GTCTC	2 cut(s)	11, 1972
BstMWI	GCNNNNNNNGC	8 cut(s)	377, 1022, 1031, 1040, 1294, 1334, 1807, 2194
BstNI	CCWGG	9 cut(s)	1325, 1419, 1848, 1921, 1926, 1972, 2049, 2175, 2241
BstNSI	RCATGY	1 cut(s)	1613
BstPAI	GACNNNNGTC	1 cut(s)	1240
BstSFI	CTRYAG	2 cut(s)	462, 1290
BstUI	CGCG	5 cut(s)	327, 371, 428, 847, 993
BstV1I	GCAGC	7 cut(s)	585, 1349, 1357, 1498, 1519, 1657, 2287
BstV2I	GAAGAC	2 cut(s)	276, 2055
BstX2I	RGATCY	8 cut(s)	58, 473, 1380, 1684, 1703, 1821, 2044, 2215
BstXI	CCANNNNNNTGG	1 cut(s)	548
BstYI	RGATCY	8 cut(s)	58, 473, 1380, 1684, 1703, 1821, 2044, 2215
BstZ17I	GTATAC	1 cut(s)	1086
BsuRI	GGCC	7 cut(s)	979, 1416, 1456, 1801, 1810, 1924, 2036
BtsCI	GGATG	9 cut(s)	268, 781, 852, 1219, 1472, 1642, 1642, 1993, 2150
BtsIMutI	CAGTG	4 cut(s)	729, 1026, 1457, 2091
Cac8I	GCNNGC	8 cut(s)	483, 757, 847, 864, 977, 993, 1398, 2106
CfoI	GCGC	5 cut(s)	324, 847, 849, 993, 995
Cfr13I	GGNCC	6 cut(s)	346, 569, 664, 1349, 1415, 2244
CseI	GACGC	3 cut(s)	51, 369, 417
Csp6I	GTAC	2 cut(s)	811, 2052
CviAII	CATG	5 cut(s)	689, 857, 1141, 1507, 1610
CviQI	GTAC	2 cut(s)	811, 2052
DdeI	CTNAG	4 cut(s)	1009, 1690, 1893, 2203
Eam1104I	CTCTTC	2 cut(s)	666, 1531
EarI	CTCTTC	2 cut(s)	666, 1531
Eco130I	CCWWGG	4 cut(s)	544, 921, 984, 2031
Eco147I	AGGCCT	5 cut(s)	979, 1801, 1810, 1924, 2036
Eco24I	GRGCYC	1 cut(s)	483
Eco47I	GGWCC	5 cut(s)	346, 569, 664, 1349, 2244
Eco57I	CTGAAG	5 cut(s)	1209, 1283, 1569, 1611, 1918
EcoNI	CCTNNNNNAGG	1 cut(s)	2172
EcoO109I	RGGNCCY	1 cut(s)	2244
EcoRI	GAATTC	2 cut(s)	373, 388
EcoRII	CCWGG	9 cut(s)	1323, 1417, 1846, 1919, 1924, 1970, 2047, 2173, 2239
EcoT14I	CCWWGG	4 cut(s)	544, 921, 984, 2031
EcoT38I	GRGCYC	1 cut(s)	483
ErhI	CCWWGG	4 cut(s)	544, 921, 984, 2031
Esp3I	CGTCTC	1 cut(s)	11
FaeI	CATG	5 cut(s)	692, 860, 1144, 1510, 1613
FalI	AAGNNNNNCTT	2 cut(s)	1798, 1830
FaqI	GGGAC	3 cut(s)	733, 1882, 2230
FatI	CATG	5 cut(s)	688, 856, 1140, 1506, 1609
FauI	CCCGC	3 cut(s)	236, 389, 498
FauNDI	CATATG	1 cut(s)	1873
FblI	GTMKAC	2 cut(s)	940, 1085
FokI	GGATG	9 cut(s)	275, 788, 839, 1206, 1459, 1629, 1649, 1980, 2137
FriOI	GRGCYC	1 cut(s)	483
FspBI	CTAG	4 cut(s)	741, 1089, 2250, 2256
GlaI	GCGC	5 cut(s)	323, 846, 848, 992, 994
GsuI	CTGGAG	1 cut(s)	1954
HaeII	RGCGCY	1 cut(s)	325
HaeIII	GGCC	7 cut(s)	979, 1416, 1456, 1801, 1810, 1924, 2036
HapII	CCGG	5 cut(s)	393, 668, 2131, 2260, 2279
HgaI	GACGC	3 cut(s)	51, 369, 417
HhaI	GCGC	5 cut(s)	324, 847, 849, 993, 995
Hin1I	GRCGYC	2 cut(s)	43, 380
Hin1II	CATG	5 cut(s)	692, 860, 1144, 1510, 1613
Hin6I	GCGC	5 cut(s)	322, 845, 847, 991, 993
HinP1I	GCGC	5 cut(s)	322, 845, 847, 991, 993
HincII	GTYRAC	2 cut(s)	1245, 1254
HindII	GTYRAC	2 cut(s)	1245, 1254
HpaII	CCGG	5 cut(s)	393, 668, 2131, 2260, 2279
HphI	GGTGA	8 cut(s)	397, 479, 565, 1442, 1488, 1864, 2175, 2229
Hpy166II	GTNNAC	6 cut(s)	664, 941, 1067, 1086, 1245, 1254
Hpy188III	TCNNGA	6 cut(s)	567, 614, 680, 1068, 1709, 1835
Hpy8I	GTNNAC	6 cut(s)	664, 941, 1067, 1086, 1245, 1254
HpyCH4III	ACNGT	6 cut(s)	724, 1249, 1665, 1738, 1781, 1886
HpyCH4IV	ACGT	1 cut(s)	2223
HpyCH4V	TGCA	6 cut(s)	803, 808, 1337, 1373, 1520, 2293
HpyF10VI	GCNNNNNNNGC	8 cut(s)	377, 1022, 1031, 1040, 1294, 1334, 1807, 2194
HpyF3I	CTNAG	4 cut(s)	1009, 1690, 1893, 2203
HpySE526I	ACGT	1 cut(s)	2223
Hsp92I	GRCGYC	2 cut(s)	43, 380
Hsp92II	CATG	5 cut(s)	692, 860, 1144, 1510, 1613
HspAI	GCGC	5 cut(s)	322, 845, 847, 991, 993
KflI	GGGWCCC	1 cut(s)	2244
LguI	GCTCTTC	1 cut(s)	666
LmnI	GCTCC	7 cut(s)	219, 746, 763, 854, 988, 1320, 1450
Lsp1109I	GCAGC	7 cut(s)	585, 1349, 1357, 1498, 1519, 1657, 2287
LweI	GCATC	1 cut(s)	1003
MaeI	CTAG	4 cut(s)	741, 1089, 2250, 2256
MaeII	ACGT	1 cut(s)	2223
MaeIII	GTNAC	2 cut(s)	1915, 2235
MbiI	CCGCTC	2 cut(s)	214, 438
MflI	RGATCY	8 cut(s)	58, 473, 1380, 1684, 1703, 1821, 2044, 2215
MhlI	GDGCHC	1 cut(s)	483
MlyI	GAGTC	7 cut(s)	281, 571, 1250, 1825, 1984, 2105, 2195
MmeI	TCCRAC	6 cut(s)	135, 168, 315, 381, 411, 540
MroXI	GAANNNNTTC	1 cut(s)	675
MseI	TTAA	7 cut(s)	788, 1130, 1407, 1767, 1880, 2015, 2163
MslI	CAYNNNNRTG	1 cut(s)	546
MspI	CCGG	5 cut(s)	393, 668, 2131, 2260, 2279
Mva1269I	GAATGC	1 cut(s)	805
MvaI	CCWGG	9 cut(s)	1325, 1419, 1848, 1921, 1926, 1972, 2049, 2175, 2241
MvnI	CGCG	5 cut(s)	327, 371, 428, 847, 993
MwoI	GCNNNNNNNGC	8 cut(s)	377, 1022, 1031, 1040, 1294, 1334, 1807, 2194
NciI	CCSGG	3 cut(s)	668, 2131, 2261
NdeI	CATATG	1 cut(s)	1873
NlaIII	CATG	5 cut(s)	692, 860, 1144, 1510, 1613
NlaIV	GGNNCC	7 cut(s)	571, 666, 1138, 1322, 1382, 2245, 2246
NmuCI	GTSAC	2 cut(s)	1915, 2235
NspI	RCATGY	1 cut(s)	1613
OliI	CACNNNNGTG	1 cut(s)	546
PasI	CCCWGGG	1 cut(s)	1418
PauI	GCGCGC	2 cut(s)	845, 991
PceI	AGGCCT	5 cut(s)	979, 1801, 1810, 1924, 2036
PciSI	GCTCTTC	1 cut(s)	666
PcsI	WCGNNNNNNNCGW	6 cut(s)	255, 264, 273, 279, 282, 288
PctI	GAATGC	1 cut(s)	805
PdmI	GAANNNNTTC	1 cut(s)	675
PfeI	GAWTC	7 cut(s)	511, 563, 1342, 1712, 1794, 2178, 2267
PflFI	GACNNNGTC	1 cut(s)	1964
PfoI	TCCNGGA	2 cut(s)	1970, 2173
PleI	GAGTC	7 cut(s)	281, 571, 1249, 1825, 1984, 2104, 2195
PpsI	GAGTC	7 cut(s)	281, 571, 1249, 1825, 1984, 2104, 2195
PpuMI	RGGWCCY	1 cut(s)	2244
PshAI	GACNNNNGTC	1 cut(s)	1240
PshBI	ATTAAT	1 cut(s)	1767
Psp5II	RGGWCCY	1 cut(s)	2244
Psp6I	CCWGG	9 cut(s)	1323, 1417, 1846, 1919, 1924, 1970, 2047, 2173, 2239
PspGI	CCWGG	9 cut(s)	1323, 1417, 1846, 1919, 1924, 1970, 2047, 2173, 2239
PspN4I	GGNNCC	7 cut(s)	571, 666, 1138, 1322, 1382, 2245, 2246
PspPI	GGNCC	6 cut(s)	346, 569, 664, 1349, 1415, 2244
PspPPI	RGGWCCY	1 cut(s)	2244
PsuI	RGATCY	8 cut(s)	58, 473, 1380, 1684, 1703, 1821, 2044, 2215
PsyI	GACNNNGTC	1 cut(s)	1964
PteI	GCGCGC	2 cut(s)	845, 991
RsaI	GTAC	2 cut(s)	812, 2053
RsaNI	GTAC	2 cut(s)	811, 2052
RseI	CAYNNNNRTG	1 cut(s)	546
SapI	GCTCTTC	1 cut(s)	666
SaqAI	TTAA	7 cut(s)	788, 1130, 1407, 1767, 1880, 2015, 2163
Sau96I	GGNCC	6 cut(s)	346, 569, 664, 1349, 1415, 2244
SchI	GAGTC	7 cut(s)	281, 571, 1250, 1825, 1984, 2105, 2195
SduI	GDGCHC	1 cut(s)	483
SfaNI	GCATC	1 cut(s)	1003
SfcI	CTRYAG	2 cut(s)	462, 1290
SfiI	GGCCNNNNNGGCC	1 cut(s)	1807
SinI	GGWCC	5 cut(s)	346, 569, 664, 1349, 2244
SmiMI	CAYNNNNRTG	1 cut(s)	546
SmlI	CTYRAG	3 cut(s)	338, 532, 614
SmoI	CTYRAG	3 cut(s)	338, 532, 614
SpeI	ACTAGT	2 cut(s)	740, 1088
SseBI	AGGCCT	5 cut(s)	979, 1801, 1810, 1924, 2036
SspI	AATATT	1 cut(s)	1786
SspMI	CTAG	4 cut(s)	741, 1089, 2250, 2256
StuI	AGGCCT	5 cut(s)	979, 1801, 1810, 1924, 2036
StyI	CCWWGG	4 cut(s)	544, 921, 984, 2031
TaaI	ACNGT	6 cut(s)	724, 1249, 1665, 1738, 1781, 1886
TaiI	ACGT	1 cut(s)	2226
TaqI	TCGA	7 cut(s)	220, 509, 575, 797, 838, 1330, 1551
TatI	WGTACW	1 cut(s)	810
TauI	GCSGC	6 cut(s)	188, 234, 306, 327, 428, 441
TfiI	GAWTC	7 cut(s)	511, 563, 1342, 1712, 1794, 2178, 2267
Tru1I	TTAA	7 cut(s)	788, 1130, 1407, 1767, 1880, 2015, 2163
Tru9I	TTAA	7 cut(s)	788, 1130, 1407, 1767, 1880, 2015, 2163
TscAI	CASTG	4 cut(s)	729, 1033, 1464, 2091
TseFI	GTSAC	2 cut(s)	1915, 2235
TseI	GCWGC	8 cut(s)	598, 1337, 1370, 1486, 1532, 1670, 2275, 2293
Tsp45I	GTSAC	2 cut(s)	1915, 2235
TspDTI	ATGAA	4 cut(s)	705, 924, 1790, 2061
TspGWI	ACGGA	3 cut(s)	85, 206, 309
TspRI	CASTG	4 cut(s)	729, 1033, 1464, 2091
Tth111I	GACNNNGTC	1 cut(s)	1964
VpaK11BI	GGWCC	5 cut(s)	346, 569, 664, 1349, 2244
VspI	ATTAAT	1 cut(s)	1767
XagI	CCTNNNNNAGG	1 cut(s)	2172
XapI	RAATTY	7 cut(s)	373, 388, 883, 955, 1109, 2017, 2080
XceI	RCATGY	1 cut(s)	1613
XmiI	GTMKAC	2 cut(s)	940, 1085
XmnI	GAANNNNTTC	1 cut(s)	675
XspI	CTAG	4 cut(s)	741, 1089, 2250, 2256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.