Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009578.1

Orthogroup ID

OG0004443

Physical Location & Seq

Genomic Coordinates Reverse (-)

50004 .. 56934

Gene Structure 6931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009578.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2568 bp

atggaggatggtgactgggttctggtgcggccgcctgcagagaaggacctctggactccaagtttagtgaaggaggatgagagttctaagcctttgaaggttacttttggtgggcctgcgaagttctggactgatgcaattccaattgggaatgggaggcttggagctatggtctggggcggtgtgccttcagaaactcttcagctcaatgaggacacactctggactggaactccgggcaactacaccaacccaaatgctccacgggcgctaacagaggtcaggaaacttgttgatgatggtaaatatgttgaagctactgaagctgcagttaagttgtccggagatccttctgatgtataccaactactcggcgacatcaacctagaatttgatgattcgcatctcaagtatgctgaagaaacttacagcagagagctagacctagatactgcaacagcaaggataaaatattctgtgggtgatgtagaatatactagggagcattttgcttcaaatcccgatcaagtgattgtgacaaagatctctgcaagtaaatcagggtccctatcattcacagtttctctagacagcaagatgcatcatggttcacatttaaatggtaaaaaccaaattatacttgaaggaagttgtcctggtagaagaatttcaccaaagtataacgacaatccagaggggattcagtttactgcagttcttgatttgcagattagtggtgacaaaggtgtgatacatgctttggatgacaagaaatttagagttgaaggggcagattgggctgttttgcttctggtggcctcatcttcatttaaggatccatttactaagccttctgattctaagagaaatccaacttcagagtctctcactgcattgaattcaataagaaatttgtcatattctgacctctatgctcatcatttggatgactatcagaatctttttcatcgtgtctcattgcagctctctaagagctctaagagcatgttaggaaatgaaactttggagatgaagaagctcaaccctattaccaatttgaatttcaggggaagtgacaatgccttgggttctactgctgacagggtgaaatcctttaaaactgatgaagatccttcttttgtggaactcttgttccaatatggtcgatatctccttatttcatgctcacggcctggaactcagccggcaaacctgcagggtatatggaactacaaaattgaacctgcatgggatggtgctcctcatacgaacattaatcttcagatgaactattggccttcccttccttgtaatctacgagaatgccaggaacccttatttgatttcacatctttattatctatcaacggaagtaaaacagcaaaggtcaactatgaagttagtggttgggttgtgcatcaagtgactgacatatgggcgaaaacatcaccggatcgaggtcaagctgtatgggctttatggccaatgggaggggcgtggatctgtactcatctatgggaacattatacttatacaatggacaaggatttcctgaaaaataaggcatatcctttgttggaaggatgtgcattatttctgctggactggttgattgaaggacgtggtgggtatcttgaaaccaacccatcaacttctccagagcacgtgtttattgctcctgatggtaagcaggccagcgtgagctactcatcaaccatggacatctcaatcataaaagaagtcttttctgcagtactttctgctgctgaggttctaggaaaaactcaagatacttttgttgtaaaagttcgtaatgctcaatctaggcttccacccacaaaaattgctagagatggttctattatggaatgggcacaagattttgaggacccagaagtgcaccatcgacatgtatcacacctgtttggcctgtttccgggccacacaataactcttgaaaaaactccagacctctgtaaagcagtggattataccctttttaaaagaggagaggaaggtccaggatggtcaactacctggaagactgcattgtgggcacgtcttcacaacagtgaacatgcgtatcgtatggtcaagcatttgattgacttggtagatccagaacgtgaaggtgattttgaaggaggactatacagtaacttgttcactgcacatcctcctttccagattgatgccaactttggtttttcagcagcagttgccgaaatgcttgtccaaagcacagtcaaggacctgtatttacttcctgctcttcctcgggataaatgggcaaatggttgtgtcaagggcttgaaggcacgcggcggggtgacagtcaacatctgctggagtgaaggagatcttcacgaaggtttcgctccaccgctccgccccaactctccggcgactccgcccgccgaccgctccggccactcgccgcttctccttcacctctcccaggtccccatttcgatcttcccctttcttaaattaccgattgcaaatgagtggattttgaaatctgttgatttggttggtttgggattccctggtagtgcattgaagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004560 GO:0005575 GO:0005576 GO:0015928 GO:0016787 GO:0016798 GO:0047513 GO:0048046

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Glyco_hyd_65N_2

Protein Analysis

855

Amino Acids

95.01

Weight (kDa)

5.65

Isoelectric Point (pI)

30.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34260
fragaria_vesca	FvH4_2g04810 FvH4_2g04810 FvH4_2g04810 FvH4_2g04810 FvH4_2g04870 FvH4_2g04870 FvH4_2g04870 FvH4_2g04870
malus_domestica	MD10G1099200.v1.1 MD10G1099400.v1.1
prunus_persica	Prupe.8G137300_v2.0.a1 Prupe.8G137300_v2.0.a1 Prupe.8G137300_v2.0.a1
pyrus_communis	pycom10g08550 pycom10g08560 pycom10g08570
rosa_chinensis	RchiOBHm_Chr6g0254541 RchiOBHm_Chr6g0254581
rosa_laevigata	RLG00000014903 RLG00000014905
rosa_multiflora	Rmu_co8517753.1_g000001 Rmu_sc0008789.1_g000011 Rmu_sc0009578.1_g000012
rosa_roxburghii	Rroxscaffold_7G00210690
rosa_rugosa	Rorug05G0553300
rosa_samantha	Rh6AG070200 Rh6BG062700 Rh6CG062600 Rh6DG059600
rosa_wichuraiana	Rw6G006150 Rw6G006190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1221, 1252
AccBSI	CCGCTC	2 cut(s)	2386, 2424
AccI	GTMKAC	1 cut(s)	360
AccII	CGCG	1 cut(s)	2322
AccIII	TCCGGA	1 cut(s)	341
AclWI	GGATC	7 cut(s)	341, 830, 843, 1124, 1461, 1508, 2111
AcoI	YGGCCR	3 cut(s)	29, 1481, 2428
AcsI	RAATTY	6 cut(s)	389, 666, 773, 898, 910, 1060
AcuI	CTGAAG	6 cut(s)	174, 185, 342, 438, 861, 1265
AcvI	CACGTG	1 cut(s)	1666
AfaI	GTAC	2 cut(s)	1507, 1755
AfiI	CCNNNNNNNGG	4 cut(s)	1457, 1490, 1936, 2458
AflIII	ACRYGT	2 cut(s)	1665, 1909
AjiI	CACGTC	2 cut(s)	1622, 2060
AjnI	CCWGG	7 cut(s)	655, 1192, 1326, 2020, 2036, 2457, 2548
AjuI	GAANNNNNNNTTGG	2 cut(s)	1046, 1078
AleI	CACNNNNGTG	1 cut(s)	2070
AloI	GAACNNNNNNTCC	4 cut(s)	1136, 1137, 1168, 1169
Alw21I	GWGCWC	4 cut(s)	998, 1261, 1665, 1902
Alw26I	GTCTC	2 cut(s)	888, 979
Alw44I	GTGCAC	1 cut(s)	1898
AlwI	GGATC	7 cut(s)	341, 830, 843, 1124, 1461, 1508, 2111
Ama87I	CYCGRG	1 cut(s)	2277
Aor13HI	TCCGGA	1 cut(s)	341
ApaLI	GTGCAC	1 cut(s)	1898
ApeKI	GCWGC	4 cut(s)	326, 982, 1763, 2213
ApoI	RAATTY	6 cut(s)	389, 666, 773, 898, 910, 1060
ArsI	GACNNNNNNTTYG	2 cut(s)	2217, 2249
AseI	ATTAAT	1 cut(s)	1275
Asp700I	GAANNNNTTC	2 cut(s)	198, 667
AspLEI	GCGC	1 cut(s)	271
AspS9I	GGNCC	8 cut(s)	46, 113, 564, 1888, 1939, 2018, 2251, 2461
AsuC2I	CCSGG	2 cut(s)	237, 1938
AsuHPI	GGTGA	9 cut(s)	23, 494, 663, 749, 1117, 1440, 2144, 2341, 2441
AvaI	CYCGRG	1 cut(s)	2277
AvaII	GGWCC	6 cut(s)	46, 564, 1888, 2018, 2251, 2461
BaeGI	GKGCMC	3 cut(s)	1876, 1902, 2059
BaeI	ACNNNNGTAYC	4 cut(s)	1782, 1815, 2066, 2099
BalI	TGGCCA	1 cut(s)	1483
BamHI	GGATCC	1 cut(s)	835
BanII	GRGCYC	1 cut(s)	998
BbrPI	CACGTG	1 cut(s)	1666
BbsI	GAAGAC	2 cut(s)	2048, 2054
Bbv12I	GWGCWC	4 cut(s)	998, 1261, 1665, 1902
BbvCI	CCTCAGC	1 cut(s)	1767
BbvI	GCAGC	4 cut(s)	313, 994, 1750, 2225
BccI	CCATC	8 cut(s)	2, 293, 1247, 1654, 1676, 1847, 1911, 2019
BceAI	ACGGC	1 cut(s)	1205
BciT130I	CCWGG	7 cut(s)	657, 1194, 1328, 2022, 2038, 2459, 2550
BcnI	CCSGG	2 cut(s)	237, 1938
BcoDI	GTCTC	2 cut(s)	888, 979
BfaI	CTAG	8 cut(s)	386, 440, 446, 498, 587, 1775, 1824, 1848
BfmI	CTRYAG	5 cut(s)	36, 327, 711, 1214, 1749
BfoI	RGCGCY	1 cut(s)	272
BfuAI	ACCTGC	2 cut(s)	1221, 1252
BglII	AGATCT	2 cut(s)	543, 2359
BisI	GCNGC	8 cut(s)	29, 32, 327, 983, 1764, 2214, 2323, 2438
BlsI	GCNGC	8 cut(s)	30, 33, 328, 984, 1765, 2215, 2324, 2439
BmcAI	AGTACT	1 cut(s)	1755
Bme1390I	CCNGG	9 cut(s)	237, 657, 1194, 1328, 1938, 2022, 2038, 2459, 2550
Bme18I	GGWCC	6 cut(s)	46, 564, 1888, 2018, 2251, 2461
BmeT110I	CYCGRG	1 cut(s)	2277
BmgBI	CACGTC	2 cut(s)	1622, 2060
BmgT120I	GGNCC	8 cut(s)	46, 113, 564, 1888, 1939, 2018, 2251, 2461
BmiI	GGNNCC	6 cut(s)	565, 566, 837, 1332, 1890, 2463
BmrFI	CCNGG	9 cut(s)	237, 657, 1194, 1328, 1938, 2022, 2038, 2459, 2550
BmrI	ACTGGG	1 cut(s)	25
BmsI	GCATC	6 cut(s)	124, 412, 588, 610, 1426, 2182
BmuI	ACTGGG	1 cut(s)	25
BpiI	GAAGAC	2 cut(s)	2048, 2054
BpmI	CTGGAG	3 cut(s)	1641, 1950, 2368
Bpu10I	CCTNAGC	1 cut(s)	1767
BpuEI	CTTGAG	2 cut(s)	392, 1770
BpuMI	CCSGG	2 cut(s)	237, 1938
BsaAI	YACGTR	1 cut(s)	1666
BsaBI	GATNNNNATC	3 cut(s)	402, 951, 1128
BsaJI	CCNNGG	6 cut(s)	263, 1083, 1716, 2276, 2457, 2548
BsaWI	WCCGGW	2 cut(s)	341, 1450
BsaXI	ACNNNNNCTCC	4 cut(s)	156, 186, 217, 247
Bsc4I	CCNNNNNNNGG	4 cut(s)	1457, 1490, 1936, 2458
Bse118I	RCCGGY	1 cut(s)	1204
Bse1I	ACTGG	3 cut(s)	20, 232, 1610
Bse3DI	GCAATG	1 cut(s)	977
Bse8I	GATNNNNATC	3 cut(s)	402, 951, 1128
BseAI	TCCGGA	1 cut(s)	341
BseBI	CCWGG	7 cut(s)	657, 1194, 1328, 2022, 2038, 2459, 2550
BseDI	CCNNGG	6 cut(s)	263, 1083, 1716, 2276, 2457, 2548
BseGI	GGATG	8 cut(s)	13, 82, 769, 952, 1258, 1589, 2030, 2173
BseJI	GATNNNNATC	3 cut(s)	402, 951, 1128
BseLI	CCNNNNNNNGG	4 cut(s)	1457, 1490, 1936, 2458
BseMI	GCAATG	1 cut(s)	977
BseMII	CTCAG	2 cut(s)	1214, 1758
BseNI	ACTGG	3 cut(s)	20, 232, 1610
BseRI	GAGGAG	2 cut(s)	1251, 2022
BseSI	GKGCMC	3 cut(s)	1876, 1902, 2059
BseX3I	CGGCCG	1 cut(s)	29
BseXI	GCAGC	4 cut(s)	313, 994, 1750, 2225
BsgI	GTGCAG	1 cut(s)	2154
Bsh1236I	CGCG	1 cut(s)	2322
Bsh1285I	CGRYCG	2 cut(s)	32, 2422
BsiEI	CGRYCG	2 cut(s)	32, 2422
BsiHKAI	GWGCWC	4 cut(s)	998, 1261, 1665, 1902
BsiHKCI	CYCGRG	1 cut(s)	2277
BsiSI	CCGG	7 cut(s)	236, 342, 1205, 1451, 1937, 2402, 2427
BslFI	GGGAC	2 cut(s)	550, 2447
BslI	CCNNNNNNNGG	4 cut(s)	1457, 1490, 1936, 2458
BsmAI	GTCTC	2 cut(s)	888, 979
BsmFI	GGGAC	2 cut(s)	550, 2447
BsmI	GAATGC	1 cut(s)	1328
BsoBI	CYCGRG	1 cut(s)	2277
Bsp1286I	GDGCHC	6 cut(s)	998, 1261, 1665, 1876, 1902, 2059
Bsp13I	TCCGGA	1 cut(s)	341
Bsp19I	CCATGG	1 cut(s)	1716
BspCNI	CTCAG	2 cut(s)	1213, 1759
BspEI	TCCGGA	1 cut(s)	341
BspFNI	CGCG	1 cut(s)	2322
BspLI	GGNNCC	6 cut(s)	565, 566, 837, 1332, 1890, 2463
BspMAI	CTGCAG	5 cut(s)	40, 331, 715, 1218, 1753
BspMI	ACCTGC	2 cut(s)	1221, 1252
BspPI	GGATC	7 cut(s)	341, 830, 843, 1124, 1461, 1508, 2111
BspQI	GCTCTTC	1 cut(s)	2277
BsrBI	CCGCTC	2 cut(s)	2386, 2424
BsrDI	GCAATG	1 cut(s)	977
BsrFI	RCCGGY	1 cut(s)	1204
BsrI	ACTGG	3 cut(s)	20, 232, 1610
BssAI	RCCGGY	1 cut(s)	1204
BssECI	CCNNGG	6 cut(s)	263, 1083, 1716, 2276, 2457, 2548
BssNAI	GTATAC	1 cut(s)	361
BssT1I	CCWWGG	2 cut(s)	1083, 1716
Bst1107I	GTATAC	1 cut(s)	361
Bst2UI	CCWGG	7 cut(s)	657, 1194, 1328, 2022, 2038, 2459, 2550
Bst4CI	ACNGT	5 cut(s)	580, 2072, 2156, 2245, 2335
Bst6I	CTCTTC	2 cut(s)	204, 2277
BstAPI	GCANNNNNTGC	1 cut(s)	2219
BstBAI	YACGTR	1 cut(s)	1666
BstC8I	GCNNGC	7 cut(s)	36, 117, 1206, 1692, 1696, 2320, 2415
BstDEI	CTNAG	7 cut(s)	87, 846, 861, 990, 999, 1200, 1767
BstDSI	CCRYGG	2 cut(s)	263, 1716
BstENI	CCTNNNNNAGG	1 cut(s)	2456
BstF5I	GGATG	8 cut(s)	13, 82, 769, 952, 1258, 1589, 2030, 2173
BstFNI	CGCG	1 cut(s)	2322
BstH2I	RGCGCY	1 cut(s)	272
BstHHI	GCGC	1 cut(s)	271
BstMAI	GTCTC	2 cut(s)	888, 979
BstMCI	CGRYCG	2 cut(s)	32, 2422
BstMWI	GCNNNNNNNGC	7 cut(s)	266, 323, 797, 1002, 1472, 2054, 2219
BstNI	CCWGG	7 cut(s)	657, 1194, 1328, 2022, 2038, 2459, 2550
BstNSI	RCATGY	4 cut(s)	758, 1009, 1913, 2081
BstSCI	CCNGG	9 cut(s)	235, 655, 1192, 1326, 1936, 2020, 2036, 2457, 2548
BstSFI	CTRYAG	5 cut(s)	36, 327, 711, 1214, 1749
BstSLI	GKGCMC	3 cut(s)	1876, 1902, 2059
BstUI	CGCG	1 cut(s)	2322
BstV1I	GCAGC	4 cut(s)	313, 994, 1750, 2225
BstV2I	GAAGAC	2 cut(s)	2048, 2054
BstX2I	RGATCY	7 cut(s)	346, 543, 835, 1129, 1500, 2116, 2359
BstYI	RGATCY	7 cut(s)	346, 543, 835, 1129, 1500, 2116, 2359
BstZ17I	GTATAC	1 cut(s)	361
BstZI	CGGCCG	1 cut(s)	29
BtgI	CCRYGG	2 cut(s)	263, 1716
BtrI	CACGTC	2 cut(s)	1622, 2060
BtsCI	GGATG	8 cut(s)	13, 82, 769, 952, 1258, 1589, 2030, 2173
BtsI	GCAGTG	3 cut(s)	888, 1989, 2166
BtsIMutI	CAGTG	4 cut(s)	888, 1989, 2077, 2166
BveI	ACCTGC	2 cut(s)	1221, 1252
Cac8I	GCNNGC	7 cut(s)	36, 117, 1206, 1692, 1696, 2320, 2415
CciNI	GCGGCCGC	1 cut(s)	29
CfoI	GCGC	1 cut(s)	271
Cfr10I	RCCGGY	1 cut(s)	1204
Cfr13I	GGNCC	8 cut(s)	46, 113, 564, 1888, 1939, 2018, 2251, 2461
Csp6I	GTAC	2 cut(s)	1506, 1754
CspCI	CAANNNNNGTGG	2 cut(s)	1825, 1860
CviAII	CATG	8 cut(s)	605, 755, 1006, 1182, 1248, 1717, 1910, 2078
CviQI	GTAC	2 cut(s)	1506, 1754
DdeI	CTNAG	7 cut(s)	87, 846, 861, 990, 999, 1200, 1767
DraI	TTTAAA	3 cut(s)	618, 1117, 2002
EaeI	YGGCCR	3 cut(s)	29, 1481, 2428
EagI	CGGCCG	1 cut(s)	29
Eam1104I	CTCTTC	2 cut(s)	204, 2277
EarI	CTCTTC	2 cut(s)	204, 2277
EciI	GGCGGA	2 cut(s)	2378, 2400
Ecl136II	GAGCTC	1 cut(s)	996
EclXI	CGGCCG	1 cut(s)	29
Eco130I	CCWWGG	2 cut(s)	1083, 1716
Eco24I	GRGCYC	1 cut(s)	998
Eco32I	GATATC	1 cut(s)	1169
Eco47I	GGWCC	6 cut(s)	46, 564, 1888, 2018, 2251, 2461
Eco52I	CGGCCG	1 cut(s)	29
Eco53kI	GAGCTC	1 cut(s)	996
Eco57I	CTGAAG	6 cut(s)	174, 185, 342, 438, 861, 1265
Eco72I	CACGTG	1 cut(s)	1666
Eco88I	CYCGRG	1 cut(s)	2277
EcoICRI	GAGCTC	1 cut(s)	996
EcoNI	CCTNNNNNAGG	1 cut(s)	2456
EcoO109I	RGGNCCY	5 cut(s)	46, 564, 1888, 2251, 2461
EcoRI	GAATTC	1 cut(s)	898
EcoRII	CCWGG	7 cut(s)	655, 1192, 1326, 2020, 2036, 2457, 2548
EcoRV	GATATC	1 cut(s)	1169
EcoT14I	CCWWGG	2 cut(s)	1083, 1716
EcoT22I	ATGCAT	1 cut(s)	603
EcoT38I	GRGCYC	1 cut(s)	998
ErhI	CCWWGG	2 cut(s)	1083, 1716
FaeI	CATG	8 cut(s)	608, 758, 1009, 1185, 1251, 1720, 1913, 2081
FalI	AAGNNNNNCTT	2 cut(s)	2346, 2378
FaqI	GGGAC	2 cut(s)	550, 2447
FatI	CATG	8 cut(s)	604, 754, 1005, 1181, 1247, 1716, 1909, 2077
FauI	CCCGC	2 cut(s)	2318, 2422
FauNDI	CATATG	1 cut(s)	1433
FblI	GTMKAC	1 cut(s)	360
Fnu4HI	GCNGC	8 cut(s)	29, 32, 327, 983, 1764, 2214, 2323, 2438
FokI	GGATG	8 cut(s)	20, 89, 776, 959, 1265, 1596, 2037, 2160
FriOI	GRGCYC	1 cut(s)	998
Fsp4HI	GCNGC	8 cut(s)	29, 32, 327, 983, 1764, 2214, 2323, 2438
FspBI	CTAG	8 cut(s)	386, 440, 446, 498, 587, 1775, 1824, 1848
GlaI	GCGC	1 cut(s)	270
GluI	GCNGC	8 cut(s)	29, 32, 327, 983, 1764, 2214, 2323, 2438
GsuI	CTGGAG	3 cut(s)	1641, 1950, 2368
HaeII	RGCGCY	1 cut(s)	272
HapII	CCGG	7 cut(s)	236, 342, 1205, 1451, 1937, 2402, 2427
HhaI	GCGC	1 cut(s)	271
Hin1II	CATG	8 cut(s)	608, 758, 1009, 1185, 1251, 1720, 1913, 2081
Hin6I	GCGC	1 cut(s)	269
HinP1I	GCGC	1 cut(s)	269
HincII	GTYRAC	3 cut(s)	1390, 2031, 2338
HindII	GTYRAC	3 cut(s)	1390, 2031, 2338
HinfI	GANTC	8 cut(s)	55, 398, 700, 857, 881, 958, 2407, 2544
HpaII	CCGG	7 cut(s)	236, 342, 1205, 1451, 1937, 2402, 2427
HphI	GGTGA	9 cut(s)	23, 494, 663, 749, 1117, 1440, 2144, 2341, 2441
Hpy166II	GTNNAC	9 cut(s)	361, 611, 708, 1390, 1900, 2031, 2075, 2166, 2338
Hpy188I	TCNGA	7 cut(s)	193, 355, 856, 880, 925, 957, 1284
Hpy8I	GTNNAC	9 cut(s)	361, 611, 708, 1390, 1900, 2031, 2075, 2166, 2338
HpyCH4III	ACNGT	5 cut(s)	580, 2072, 2156, 2245, 2335
HpyCH4IV	ACGT	4 cut(s)	1621, 1665, 2059, 2125
HpyF10VI	GCNNNNNNNGC	7 cut(s)	266, 323, 797, 1002, 1472, 2054, 2219
HpyF3I	CTNAG	7 cut(s)	87, 846, 861, 990, 999, 1200, 1767
HpySE526I	ACGT	4 cut(s)	1621, 1665, 2059, 2125
Hsp92II	CATG	8 cut(s)	608, 758, 1009, 1185, 1251, 1720, 1913, 2081
HspAI	GCGC	1 cut(s)	269
KflI	GGGWCCC	1 cut(s)	564
Kpn2I	TCCGGA	1 cut(s)	341
KroI	GCCGGC	1 cut(s)	1204
KroNI	GCCGGC	1 cut(s)	1206
LguI	GCTCTTC	1 cut(s)	2277
LmnI	GCTCC	8 cut(s)	164, 265, 502, 1264, 1681, 2383, 2391, 2429
Lsp1109I	GCAGC	4 cut(s)	313, 994, 1750, 2225
LweI	GCATC	6 cut(s)	124, 412, 588, 610, 1426, 2182
MaeI	CTAG	8 cut(s)	386, 440, 446, 498, 587, 1775, 1824, 1848
MaeII	ACGT	4 cut(s)	1621, 1665, 2059, 2125
MaeIII	GTNAC	8 cut(s)	11, 100, 535, 737, 1073, 1423, 2156, 2329
MbiI	CCGCTC	2 cut(s)	2386, 2424
MfeI	CAATTG	1 cut(s)	144
MflI	RGATCY	7 cut(s)	346, 543, 835, 1129, 1500, 2116, 2359
MhlI	GDGCHC	6 cut(s)	998, 1261, 1665, 1876, 1902, 2059
MlsI	TGGCCA	1 cut(s)	1483
MluNI	TGGCCA	1 cut(s)	1483
MlyI	GAGTC	3 cut(s)	49, 890, 2401
MmeI	TCCRAC	2 cut(s)	896, 1557
Mox20I	TGGCCA	1 cut(s)	1483
Mph1103I	ATGCAT	1 cut(s)	603
MroI	TCCGGA	1 cut(s)	341
MroNI	GCCGGC	1 cut(s)	1204
MroXI	GAANNNNTTC	2 cut(s)	198, 667
MscI	TGGCCA	1 cut(s)	1483
MseI	TTAA	7 cut(s)	333, 617, 831, 1116, 1275, 2001, 2487
MslI	CAYNNNNRTG	4 cut(s)	618, 945, 1908, 2070
Msp20I	TGGCCA	1 cut(s)	1483
MspI	CCGG	7 cut(s)	236, 342, 1205, 1451, 1937, 2402, 2427
MspR9I	CCNGG	9 cut(s)	237, 657, 1194, 1328, 1938, 2022, 2038, 2459, 2550
MunI	CAATTG	1 cut(s)	144
Mva1269I	GAATGC	1 cut(s)	1328
MvaI	CCWGG	7 cut(s)	657, 1194, 1328, 2022, 2038, 2459, 2550
MvnI	CGCG	1 cut(s)	2322
MwoI	GCNNNNNNNGC	7 cut(s)	266, 323, 797, 1002, 1472, 2054, 2219
NaeI	GCCGGC	1 cut(s)	1206
NciI	CCSGG	2 cut(s)	237, 1938
NcoI	CCATGG	1 cut(s)	1716
NdeI	CATATG	1 cut(s)	1433
NgoMIV	GCCGGC	1 cut(s)	1204
NlaIII	CATG	8 cut(s)	608, 758, 1009, 1185, 1251, 1720, 1913, 2081
NlaIV	GGNNCC	6 cut(s)	565, 566, 837, 1332, 1890, 2463
NmeAIII	GCCGAG	1 cut(s)	351
NmuCI	GTSAC	6 cut(s)	11, 535, 737, 1073, 1423, 2329
NotI	GCGGCCGC	1 cut(s)	29
NsiI	ATGCAT	1 cut(s)	603
NspI	RCATGY	4 cut(s)	758, 1009, 1913, 2081
OliI	CACNNNNGTG	1 cut(s)	2070
PciI	ACATGT	1 cut(s)	1909
PciSI	GCTCTTC	1 cut(s)	2277
PctI	GAATGC	1 cut(s)	1328
PdiI	GCCGGC	1 cut(s)	1206
PdmI	GAANNNNTTC	2 cut(s)	198, 667
PfeI	GAWTC	5 cut(s)	398, 700, 857, 958, 2544
PfoI	TCCNGGA	1 cut(s)	2020
PkrI	GCNGC	8 cut(s)	30, 33, 328, 984, 1765, 2215, 2324, 2439
PleI	GAGTC	3 cut(s)	49, 889, 2401
PmaCI	CACGTG	1 cut(s)	1666
PmlI	CACGTG	1 cut(s)	1666
PpsI	GAGTC	3 cut(s)	49, 889, 2401
Ppu21I	YACGTR	1 cut(s)	1666
PpuMI	RGGWCCY	5 cut(s)	46, 564, 1888, 2251, 2461
PscI	ACATGT	1 cut(s)	1909
PshBI	ATTAAT	1 cut(s)	1275
Psp124BI	GAGCTC	1 cut(s)	998
Psp5II	RGGWCCY	5 cut(s)	46, 564, 1888, 2251, 2461
Psp6I	CCWGG	7 cut(s)	655, 1192, 1326, 2020, 2036, 2457, 2548
PspCI	CACGTG	1 cut(s)	1666
PspGI	CCWGG	7 cut(s)	655, 1192, 1326, 2020, 2036, 2457, 2548
PspN4I	GGNNCC	6 cut(s)	565, 566, 837, 1332, 1890, 2463
PspPI	GGNCC	8 cut(s)	46, 113, 564, 1888, 1939, 2018, 2251, 2461
PspPPI	RGGWCCY	5 cut(s)	46, 564, 1888, 2251, 2461
PstI	CTGCAG	5 cut(s)	40, 331, 715, 1218, 1753
PsuI	RGATCY	7 cut(s)	346, 543, 835, 1129, 1500, 2116, 2359
RsaI	GTAC	2 cut(s)	1507, 1755
RsaNI	GTAC	2 cut(s)	1506, 1754
RseI	CAYNNNNRTG	4 cut(s)	618, 945, 1908, 2070
SacI	GAGCTC	1 cut(s)	998
SapI	GCTCTTC	1 cut(s)	2277
SaqAI	TTAA	7 cut(s)	333, 617, 831, 1116, 1275, 2001, 2487
SatI	GCNGC	8 cut(s)	29, 32, 327, 983, 1764, 2214, 2323, 2438
Sau96I	GGNCC	8 cut(s)	46, 113, 564, 1888, 1939, 2018, 2251, 2461
SbfI	CCTGCAGG	1 cut(s)	1218
ScaI	AGTACT	1 cut(s)	1755
SchI	GAGTC	3 cut(s)	49, 890, 2401
ScrFI	CCNGG	9 cut(s)	237, 657, 1194, 1328, 1938, 2022, 2038, 2459, 2550
SdaI	CCTGCAGG	1 cut(s)	1218
SduI	GDGCHC	6 cut(s)	998, 1261, 1665, 1876, 1902, 2059
SfaNI	GCATC	6 cut(s)	124, 412, 588, 610, 1426, 2182
SfcI	CTRYAG	5 cut(s)	36, 327, 711, 1214, 1749
SinI	GGWCC	6 cut(s)	46, 564, 1888, 2018, 2251, 2461
SmiI	ATTTAAAT	1 cut(s)	618
SmiMI	CAYNNNNRTG	4 cut(s)	618, 945, 1908, 2070
SmlI	CTYRAG	2 cut(s)	407, 1785
SmoI	CTYRAG	2 cut(s)	407, 1785
Sse8387I	CCTGCAGG	1 cut(s)	1218
SspI	AATATT	1 cut(s)	473
SspMI	CTAG	8 cut(s)	386, 440, 446, 498, 587, 1775, 1824, 1848
SstI	GAGCTC	1 cut(s)	998
StyD4I	CCNGG	9 cut(s)	235, 655, 1192, 1326, 1936, 2020, 2036, 2457, 2548
StyI	CCWWGG	2 cut(s)	1083, 1716
SwaI	ATTTAAAT	1 cut(s)	618
TaaI	ACNGT	5 cut(s)	580, 2072, 2156, 2245, 2335
TaiI	ACGT	4 cut(s)	1624, 1668, 2062, 2128
TaqI	TCGA	4 cut(s)	1165, 1456, 1906, 2471
TatI	WGTACW	2 cut(s)	1505, 1753
TauI	GCSGC	4 cut(s)	31, 34, 2325, 2440
TfiI	GAWTC	5 cut(s)	398, 700, 857, 958, 2544
Tru1I	TTAA	7 cut(s)	333, 617, 831, 1116, 1275, 2001, 2487
Tru9I	TTAA	7 cut(s)	333, 617, 831, 1116, 1275, 2001, 2487
TscAI	CASTG	4 cut(s)	895, 1989, 2077, 2173
TseFI	GTSAC	6 cut(s)	11, 535, 737, 1073, 1423, 2329
TseI	GCWGC	4 cut(s)	326, 982, 1763, 2213
Tsp45I	GTSAC	6 cut(s)	11, 535, 737, 1073, 1423, 2329
TspDTI	ATGAA	8 cut(s)	816, 956, 1032, 1046, 1140, 1170, 1301, 1410
TspGWI	ACGGA	1 cut(s)	1383
TspRI	CASTG	4 cut(s)	895, 1989, 2077, 2173
VneI	GTGCAC	1 cut(s)	1898
VpaK11BI	GGWCC	6 cut(s)	46, 564, 1888, 2018, 2251, 2461
VspI	ATTAAT	1 cut(s)	1275
XagI	CCTNNNNNAGG	1 cut(s)	2456
XapI	RAATTY	6 cut(s)	389, 666, 773, 898, 910, 1060
XbaI	TCTAGA	1 cut(s)	586
XceI	RCATGY	4 cut(s)	758, 1009, 1913, 2081
XmiI	GTMKAC	1 cut(s)	360
XmnI	GAANNNNTTC	2 cut(s)	198, 667
XspI	CTAG	8 cut(s)	386, 440, 446, 498, 587, 1775, 1824, 1848
ZrmI	AGTACT	1 cut(s)	1755
Zsp2I	ATGCAT	1 cut(s)	603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.