Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0004443

Physical Location & Seq

Genomic Coordinates Reverse (-)

9843094 .. 9849330

Gene Structure 6237 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG062700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGCATCATGGTTCACATTTAAATGGTAAAAACCAAATTATACTTGAAGGAAGTTGTCCTGGTAGAAGAATTTCACCAAAGTATAATGACAATCCAGAGGGGATTCAGTTTACTGCAGTTCTTGATTTGCAGATTAGTGGTGACAAAGGTGTGATACATGCTTTGGATGACAAGAAATTTAGAGTTGAAGAGGCAGATTGGGCTGTTTTGCTTCTGGTGGCCTCATCTTCATTTAAGGATCCATTTACTAAGCCTTCTGATTCTAAGAGAAATCCAACTTCAGAGTCTCTCACTGCATTGAATTCAATAAGAAATTTGTCATATTCTGACCTCTCTGCTCATCATTTGGATGACTATCAGAATCTTTTTCATCGTGTCTCATTGCAGCTCTCTAAGAGCTCTAAGAGCATGTTAGGAAATGAAACTTTGGAGATGAAGAAGCTCAACCCTATTACCAATTTGAATTTCAAGGGAAGTGACAATGCCTTGGGTTCTACTGCTGACAGGGTGAAATCCTTTAAAACTGATGAAGATCCTTCTTTTGTGGAACTCTTGTTCCAATATGGTCGATATCTCCTTATTTCATGCTCACGGCCTGGAACTCAGCCGGCAAACCTGCAGGGTATATGGAACTACAAAATTGAACCTGCATGGGATGGTGCTCCTCATACGAACATTAATCTTCAGATGAACTATTGGCCTTCCCTTCCTTGTAATCTACGAGAATGCCAGGAACCCTTATTTGATTTCACATCTTTATTATCTATTAACGGAAGTAAAACAGCAAAGGTCAACTATGAAGTTAGTGGTTGGGTTGTGCATCAAGTGACTGACATATGGGCGAAAACATCACCAGATCGAGGTCAAGCTGTATGGGCTTTATGGCCAATGGGAGGGGCGTGGATCTGTACTCATCTATGGGAACATTATACTTATACAATGGACAAGGATTTCCTGAAAAATAAGGCATATCCTTTGTTGGAAGGATGTGCATCATTTCTGCTGGACTGGTTGATTGAAGGACGTGGTGGGTATCTTGAAACCAACCCATCAACTTCTCCAGAGCACATGTTTATTGCTCCTGATGGTAAGCAGGCCAGCGTGAGCTACTCATCAACCATGGACATCTCAATCATAAAAGAAGTCTTTTCTGCAGTACTTACTGCTGCTGAGGTTCTAGGAAAAACTCAAGATTCTTTTGTTGAAAAAGTTCGTAATGCTCAATCTAGGCTTCCACCCACAAAAATTGCTAGAGATGGTTCTATTATGGAATGGGCACAAGATTTTGAGGACCCAGAAGTGCACCATCGACATGTATCACACCTGTTTGGCCTGTTTCCGGGCCACACGATAACTCTTGAAAAAACTCCAGACCTCTGTAAAGCAGTGGATTATACCCTTTTTAAAAGAGGAGAGGAAGGTCCAGGATGGTCAACTACCTGGAAGACTGCATTGTGGGCACGTCTTCACAACAGTGAACATGCATATCGTATGGTCAAGCATTTGATTGACTTGGTAGATCCAGAACATGAAAGTGATTTTGAAGGAGGACTATACAGTAACTTGTTCACTGCACATCCTCCTTTCCAGATTGATGCCAACTTTGGTTTTTCAGCAGCAGTTGCCGAAATGCTTGTCCAAAGCACAGTCAAGGACCTGTATTTACTTCCTGCTCTTCCTCGGGATAAATGGGCAAATGGTTGTGTCAAGGGCTTGAAGGCACGCGGCGGGGTGACAGTCAACATCTGCTGGAGTGAAGGAGATCTTCACGAAGTTGGCATTTGGTCCAAGGACAACAACACTGTTAAAAGACTACATTATAGAGGAAATACAGTTACGGCAAACATATCGTCGGGCAGGATTTATACATTCAACAGACAGTTAAAATGTGTGAGGACAGTAAGTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004560 GO:0005575 GO:0005576 GO:0015928 GO:0016787 GO:0016798 GO:0047513 GO:0048046

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Glyco_hyd_65N_2

Protein Analysis

636

Amino Acids

71.47

Weight (kDa)

6.39

Isoelectric Point (pI)

30.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_95_cat	PF22124	107 - 545	3.9e-169	Glycosyl hydrolase family 95 catalytic domain
Glyco_hydro_95_C	PF21307	547 - 609	1.1e-14	Glycoside hydrolase family 95, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34260
fragaria_vesca	FvH4_2g04810 FvH4_2g04810 FvH4_2g04810 FvH4_2g04810 FvH4_2g04870 FvH4_2g04870 FvH4_2g04870 FvH4_2g04870
malus_domestica	MD10G1099200.v1.1 MD10G1099400.v1.1
prunus_persica	Prupe.8G137300_v2.0.a1 Prupe.8G137300_v2.0.a1 Prupe.8G137300_v2.0.a1
pyrus_communis	pycom10g08550 pycom10g08560 pycom10g08570
rosa_chinensis	RchiOBHm_Chr6g0254541 RchiOBHm_Chr6g0254581
rosa_laevigata	RLG00000014903 RLG00000014905
rosa_multiflora	Rmu_co8517753.1_g000001 Rmu_sc0008789.1_g000011 Rmu_sc0009578.1_g000012
rosa_roxburghii	Rroxscaffold_7G00210690
rosa_rugosa	Rorug05G0553300
rosa_samantha	Rh6AG070200 Rh6BG062700 Rh6CG062600 Rh6DG059600
rosa_wichuraiana	Rw6G006150 Rw6G006190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	624, 655
AccII	CGCG	1 cut(s)	1725
AciI	CCGC	2 cut(s)	1725, 1728
AclWI	GGATC	5 cut(s)	233, 246, 527, 911, 1514
AcoI	YGGCCR	1 cut(s)	884
AcsI	RAATTY	5 cut(s)	69, 176, 301, 313, 463
AcuI	CTGAAG	2 cut(s)	264, 668
AfaI	GTAC	2 cut(s)	910, 1158
AfiI	CCNNNNNNNGG	3 cut(s)	860, 893, 1339
AflIII	ACRYGT	2 cut(s)	1068, 1312
AhdI	GACNNNNNGTC	1 cut(s)	1902
AjiI	CACGTC	2 cut(s)	1025, 1463
AjnI	CCWGG	5 cut(s)	58, 595, 729, 1423, 1439
AjuI	GAANNNNNNNTTGG	2 cut(s)	449, 481
AleI	CACNNNNGTG	1 cut(s)	1473
AloI	GAACNNNNNNTCC	4 cut(s)	539, 540, 571, 572
AluBI	AGCT	5 cut(s)	388, 399, 442, 869, 1107
AluI	AGCT	5 cut(s)	388, 399, 442, 869, 1107
Alw21I	GWGCWC	4 cut(s)	401, 664, 1068, 1305
Alw26I	GTCTC	2 cut(s)	291, 382
Alw44I	GTGCAC	1 cut(s)	1301
AlwI	GGATC	5 cut(s)	233, 246, 527, 911, 1514
Ama87I	CYCGRG	1 cut(s)	1680
AoxI	GGCC	7 cut(s)	219, 593, 698, 884, 1095, 1330, 1342
ApaLI	GTGCAC	1 cut(s)	1301
ApeKI	GCWGC	3 cut(s)	385, 1166, 1616
ApoI	RAATTY	5 cut(s)	69, 176, 301, 313, 463
ArsI	GACNNNNNNTTYG	4 cut(s)	1620, 1652, 1835, 1867
AseI	ATTAAT	1 cut(s)	678
Asp700I	GAANNNNTTC	2 cut(s)	70, 1209
AspS9I	GGNCC	5 cut(s)	1291, 1342, 1421, 1654, 1785
AsuC2I	CCSGG	1 cut(s)	1341
AsuHPI	GGTGA	5 cut(s)	66, 152, 520, 843, 1744
AvaI	CYCGRG	1 cut(s)	1680
AvaII	GGWCC	4 cut(s)	1291, 1421, 1654, 1785
BaeGI	GKGCMC	3 cut(s)	1279, 1305, 1462
BalI	TGGCCA	1 cut(s)	886
BamHI	GGATCC	1 cut(s)	238
BanII	GRGCYC	1 cut(s)	401
BbsI	GAAGAC	2 cut(s)	1451, 1457
Bbv12I	GWGCWC	4 cut(s)	401, 664, 1068, 1305
BbvCI	CCTCAGC	1 cut(s)	1170
BbvI	GCAGC	3 cut(s)	397, 1153, 1628
BccI	CCATC	6 cut(s)	650, 1057, 1079, 1250, 1314, 1422
BceAI	ACGGC	2 cut(s)	608, 1854
BcgI	CGANNNNNNTGC	2 cut(s)	1830, 1864
BciT130I	CCWGG	5 cut(s)	60, 597, 731, 1425, 1441
BcnI	CCSGG	1 cut(s)	1341
BcoDI	GTCTC	2 cut(s)	291, 382
BfaI	CTAG	3 cut(s)	1178, 1227, 1251
BfmI	CTRYAG	3 cut(s)	114, 617, 1152
BfuAI	ACCTGC	2 cut(s)	624, 655
BglII	AGATCT	1 cut(s)	1762
BisI	GCNGC	4 cut(s)	386, 1167, 1617, 1726
BlsI	GCNGC	4 cut(s)	387, 1168, 1618, 1727
BmcAI	AGTACT	1 cut(s)	1158
Bme1390I	CCNGG	6 cut(s)	60, 597, 731, 1341, 1425, 1441
Bme18I	GGWCC	4 cut(s)	1291, 1421, 1654, 1785
BmeRI	GACNNNNNGTC	1 cut(s)	1902
BmeT110I	CYCGRG	1 cut(s)	1680
BmgBI	CACGTC	2 cut(s)	1025, 1463
BmgT120I	GGNCC	5 cut(s)	1291, 1342, 1421, 1654, 1785
BmiI	GGNNCC	3 cut(s)	240, 735, 1293
BmrFI	CCNGG	6 cut(s)	60, 597, 731, 1341, 1425, 1441
BmsI	GCATC	4 cut(s)	13, 829, 1001, 1585
BpiI	GAAGAC	2 cut(s)	1451, 1457
BpmI	CTGGAG	3 cut(s)	1044, 1353, 1771
Bpu10I	CCTNAGC	1 cut(s)	1170
BpuEI	CTTGAG	1 cut(s)	1173
BpuMI	CCSGG	1 cut(s)	1341
BsaBI	GATNNNNATC	3 cut(s)	354, 531, 991
BsaJI	CCNNGG	4 cut(s)	486, 1119, 1679, 1788
Bsc4I	CCNNNNNNNGG	3 cut(s)	860, 893, 1339
Bse118I	RCCGGY	1 cut(s)	607
Bse1I	ACTGG	1 cut(s)	1013
Bse3DI	GCAATG	1 cut(s)	380
Bse8I	GATNNNNATC	3 cut(s)	354, 531, 991
BseBI	CCWGG	5 cut(s)	60, 597, 731, 1425, 1441
BseDI	CCNNGG	4 cut(s)	486, 1119, 1679, 1788
BseGI	GGATG	6 cut(s)	172, 355, 661, 992, 1433, 1576
BseJI	GATNNNNATC	3 cut(s)	354, 531, 991
BseLI	CCNNNNNNNGG	3 cut(s)	860, 893, 1339
BseMI	GCAATG	1 cut(s)	380
BseMII	CTCAG	2 cut(s)	617, 1161
BseNI	ACTGG	1 cut(s)	1013
BseRI	GAGGAG	2 cut(s)	654, 1425
BseSI	GKGCMC	3 cut(s)	1279, 1305, 1462
BseXI	GCAGC	3 cut(s)	397, 1153, 1628
BsgI	GTGCAG	1 cut(s)	1557
Bsh1236I	CGCG	1 cut(s)	1725
BshFI	GGCC	7 cut(s)	221, 595, 700, 886, 1097, 1332, 1344
BsiHKAI	GWGCWC	4 cut(s)	401, 664, 1068, 1305
BsiHKCI	CYCGRG	1 cut(s)	1680
BsiSI	CCGG	2 cut(s)	608, 1340
BslI	CCNNNNNNNGG	3 cut(s)	860, 893, 1339
BsmAI	GTCTC	2 cut(s)	291, 382
BsmI	GAATGC	1 cut(s)	731
BsnI	GGCC	7 cut(s)	221, 595, 700, 886, 1097, 1332, 1344
BsoBI	CYCGRG	1 cut(s)	1680
Bsp1286I	GDGCHC	6 cut(s)	401, 664, 1068, 1279, 1305, 1462
Bsp143I	GATC	6 cut(s)	238, 532, 856, 903, 1519, 1762
Bsp19I	CCATGG	1 cut(s)	1119
BspACI	CCGC	2 cut(s)	1725, 1728
BspANI	GGCC	7 cut(s)	221, 595, 700, 886, 1097, 1332, 1344
BspCNI	CTCAG	2 cut(s)	616, 1162
BspFNI	CGCG	1 cut(s)	1725
BspLI	GGNNCC	3 cut(s)	240, 735, 1293
BspMAI	CTGCAG	3 cut(s)	118, 621, 1156
BspMI	ACCTGC	2 cut(s)	624, 655
BspPI	GGATC	5 cut(s)	233, 246, 527, 911, 1514
BspQI	GCTCTTC	1 cut(s)	1680
BsrDI	GCAATG	1 cut(s)	380
BsrFI	RCCGGY	1 cut(s)	607
BsrI	ACTGG	1 cut(s)	1013
BssAI	RCCGGY	1 cut(s)	607
BssECI	CCNNGG	4 cut(s)	486, 1119, 1679, 1788
BssMI	GATC	6 cut(s)	238, 532, 856, 903, 1519, 1762
BssT1I	CCWWGG	3 cut(s)	486, 1119, 1788
Bst2UI	CCWGG	5 cut(s)	60, 597, 731, 1425, 1441
Bst4CI	ACNGT	8 cut(s)	1475, 1559, 1648, 1738, 1804, 1834, 1881, 1900
Bst6I	CTCTTC	2 cut(s)	183, 1680
BstAPI	GCANNNNNTGC	1 cut(s)	1622
BstC8I	GCNNGC	4 cut(s)	609, 1095, 1099, 1723
BstDEI	CTNAG	6 cut(s)	249, 264, 393, 402, 603, 1170
BstDSI	CCRYGG	1 cut(s)	1119
BstF5I	GGATG	6 cut(s)	172, 355, 661, 992, 1433, 1576
BstFNI	CGCG	1 cut(s)	1725
BstKTI	GATC	6 cut(s)	241, 535, 859, 906, 1522, 1765
BstMAI	GTCTC	2 cut(s)	291, 382
BstMBI	GATC	6 cut(s)	238, 532, 856, 903, 1519, 1762
BstMWI	GCNNNNNNNGC	5 cut(s)	200, 405, 875, 1457, 1622
BstNI	CCWGG	5 cut(s)	60, 597, 731, 1425, 1441
BstNSI	RCATGY	5 cut(s)	161, 412, 1072, 1316, 1484
BstSCI	CCNGG	6 cut(s)	58, 595, 729, 1339, 1423, 1439
BstSFI	CTRYAG	3 cut(s)	114, 617, 1152
BstSLI	GKGCMC	3 cut(s)	1279, 1305, 1462
BstUI	CGCG	1 cut(s)	1725
BstV1I	GCAGC	3 cut(s)	397, 1153, 1628
BstV2I	GAAGAC	2 cut(s)	1451, 1457
BstX2I	RGATCY	5 cut(s)	238, 532, 903, 1519, 1762
BstYI	RGATCY	5 cut(s)	238, 532, 903, 1519, 1762
BsuRI	GGCC	7 cut(s)	221, 595, 700, 886, 1097, 1332, 1344
BtgI	CCRYGG	1 cut(s)	1119
BtrI	CACGTC	2 cut(s)	1025, 1463
BtsCI	GGATG	6 cut(s)	172, 355, 661, 992, 1433, 1576
BtsI	GCAGTG	3 cut(s)	291, 1392, 1569
BtsIMutI	CAGTG	5 cut(s)	291, 1392, 1480, 1569, 1800
BveI	ACCTGC	2 cut(s)	624, 655
Cac8I	GCNNGC	4 cut(s)	609, 1095, 1099, 1723
Cfr10I	RCCGGY	1 cut(s)	607
Cfr13I	GGNCC	5 cut(s)	1291, 1342, 1421, 1654, 1785
Csp6I	GTAC	2 cut(s)	909, 1157
CspCI	CAANNNNNGTGG	2 cut(s)	1228, 1263
CviQI	GTAC	2 cut(s)	909, 1157
DdeI	CTNAG	6 cut(s)	249, 264, 393, 402, 603, 1170
DpnI	GATC	6 cut(s)	240, 534, 858, 905, 1521, 1764
DpnII	GATC	6 cut(s)	238, 532, 856, 903, 1519, 1762
DraI	TTTAAA	3 cut(s)	21, 520, 1405
DriI	GACNNNNNGTC	1 cut(s)	1902
EaeI	YGGCCR	1 cut(s)	884
Eam1104I	CTCTTC	2 cut(s)	183, 1680
Eam1105I	GACNNNNNGTC	1 cut(s)	1902
EarI	CTCTTC	2 cut(s)	183, 1680
Ecl136II	GAGCTC	1 cut(s)	399
Eco130I	CCWWGG	3 cut(s)	486, 1119, 1788
Eco24I	GRGCYC	1 cut(s)	401
Eco32I	GATATC	1 cut(s)	572
Eco47I	GGWCC	4 cut(s)	1291, 1421, 1654, 1785
Eco53kI	GAGCTC	1 cut(s)	399
Eco57I	CTGAAG	2 cut(s)	264, 668
Eco88I	CYCGRG	1 cut(s)	1680
EcoICRI	GAGCTC	1 cut(s)	399
EcoO109I	RGGNCCY	2 cut(s)	1291, 1654
EcoRI	GAATTC	1 cut(s)	301
EcoRII	CCWGG	5 cut(s)	58, 595, 729, 1423, 1439
EcoRV	GATATC	1 cut(s)	572
EcoT14I	CCWWGG	3 cut(s)	486, 1119, 1788
EcoT22I	ATGCAT	2 cut(s)	6, 1486
EcoT38I	GRGCYC	1 cut(s)	401
ErhI	CCWWGG	3 cut(s)	486, 1119, 1788
FalI	AAGNNNNNCTT	2 cut(s)	1749, 1781
FauI	CCCGC	1 cut(s)	1721
FauNDI	CATATG	1 cut(s)	836
Fnu4HI	GCNGC	4 cut(s)	386, 1167, 1617, 1726
FokI	GGATG	6 cut(s)	179, 362, 668, 999, 1440, 1563
FriOI	GRGCYC	1 cut(s)	401
Fsp4HI	GCNGC	4 cut(s)	386, 1167, 1617, 1726
FspBI	CTAG	3 cut(s)	1178, 1227, 1251
GluI	GCNGC	4 cut(s)	386, 1167, 1617, 1726
GsuI	CTGGAG	3 cut(s)	1044, 1353, 1771
HaeIII	GGCC	7 cut(s)	221, 595, 700, 886, 1097, 1332, 1344
HapII	CCGG	2 cut(s)	608, 1340
HincII	GTYRAC	3 cut(s)	793, 1434, 1741
HindII	GTYRAC	3 cut(s)	793, 1434, 1741
HinfI	GANTC	5 cut(s)	103, 260, 284, 361, 1193
HpaII	CCGG	2 cut(s)	608, 1340
HphI	GGTGA	5 cut(s)	66, 152, 520, 843, 1744
Hpy166II	GTNNAC	8 cut(s)	14, 111, 793, 1303, 1434, 1478, 1569, 1741
Hpy188I	TCNGA	5 cut(s)	259, 283, 328, 360, 687
Hpy8I	GTNNAC	8 cut(s)	14, 111, 793, 1303, 1434, 1478, 1569, 1741
Hpy99I	CGWCG	1 cut(s)	1855
HpyCH4III	ACNGT	8 cut(s)	1475, 1559, 1648, 1738, 1804, 1834, 1881, 1900
HpyCH4IV	ACGT	2 cut(s)	1024, 1462
HpyF10VI	GCNNNNNNNGC	5 cut(s)	200, 405, 875, 1457, 1622
HpyF3I	CTNAG	6 cut(s)	249, 264, 393, 402, 603, 1170
HpySE526I	ACGT	2 cut(s)	1024, 1462
KroI	GCCGGC	1 cut(s)	607
KroNI	GCCGGC	1 cut(s)	609
Kzo9I	GATC	6 cut(s)	238, 532, 856, 903, 1519, 1762
LguI	GCTCTTC	1 cut(s)	1680
LmnI	GCTCC	2 cut(s)	667, 1084
Lsp1109I	GCAGC	3 cut(s)	397, 1153, 1628
LweI	GCATC	4 cut(s)	13, 829, 1001, 1585
MaeI	CTAG	3 cut(s)	1178, 1227, 1251
MaeII	ACGT	2 cut(s)	1024, 1462
MaeIII	GTNAC	6 cut(s)	140, 476, 826, 1559, 1732, 1834
MalI	GATC	6 cut(s)	240, 534, 858, 905, 1521, 1764
MboI	GATC	6 cut(s)	238, 532, 856, 903, 1519, 1762
MflI	RGATCY	5 cut(s)	238, 532, 903, 1519, 1762
MhlI	GDGCHC	6 cut(s)	401, 664, 1068, 1279, 1305, 1462
MlsI	TGGCCA	1 cut(s)	886
MluCI	AATT	9 cut(s)	36, 69, 176, 301, 313, 457, 463, 639, 1245
MluNI	TGGCCA	1 cut(s)	886
MlyI	GAGTC	1 cut(s)	293
MmeI	TCCRAC	2 cut(s)	299, 960
Mox20I	TGGCCA	1 cut(s)	886
Mph1103I	ATGCAT	2 cut(s)	6, 1486
MroNI	GCCGGC	1 cut(s)	607
MroXI	GAANNNNTTC	2 cut(s)	70, 1209
MscI	TGGCCA	1 cut(s)	886
MseI	TTAA	8 cut(s)	20, 234, 519, 678, 768, 1404, 1806, 1883
MslI	CAYNNNNRTG	5 cut(s)	21, 348, 1311, 1473, 1533
Msp20I	TGGCCA	1 cut(s)	886
MspI	CCGG	2 cut(s)	608, 1340
MspR9I	CCNGG	6 cut(s)	60, 597, 731, 1341, 1425, 1441
Mva1269I	GAATGC	1 cut(s)	731
MvaI	CCWGG	5 cut(s)	60, 597, 731, 1425, 1441
MvnI	CGCG	1 cut(s)	1725
MwoI	GCNNNNNNNGC	5 cut(s)	200, 405, 875, 1457, 1622
NaeI	GCCGGC	1 cut(s)	609
NciI	CCSGG	1 cut(s)	1341
NcoI	CCATGG	1 cut(s)	1119
NdeI	CATATG	1 cut(s)	836
NdeII	GATC	6 cut(s)	238, 532, 856, 903, 1519, 1762
NgoMIV	GCCGGC	1 cut(s)	607
NlaIV	GGNNCC	3 cut(s)	240, 735, 1293
NmuCI	GTSAC	4 cut(s)	140, 476, 826, 1732
NsiI	ATGCAT	2 cut(s)	6, 1486
NspI	RCATGY	5 cut(s)	161, 412, 1072, 1316, 1484
OliI	CACNNNNGTG	1 cut(s)	1473
PciI	ACATGT	2 cut(s)	1068, 1312
PciSI	GCTCTTC	1 cut(s)	1680
PctI	GAATGC	1 cut(s)	731
PdiI	GCCGGC	1 cut(s)	609
PdmI	GAANNNNTTC	2 cut(s)	70, 1209
PfeI	GAWTC	4 cut(s)	103, 260, 361, 1193
PfoI	TCCNGGA	1 cut(s)	1423
PkrI	GCNGC	4 cut(s)	387, 1168, 1618, 1727
PleI	GAGTC	1 cut(s)	292
PpsI	GAGTC	1 cut(s)	292
PpuMI	RGGWCCY	2 cut(s)	1291, 1654
PscI	ACATGT	2 cut(s)	1068, 1312
PshBI	ATTAAT	1 cut(s)	678
Psp124BI	GAGCTC	1 cut(s)	401
Psp5II	RGGWCCY	2 cut(s)	1291, 1654
Psp6I	CCWGG	5 cut(s)	58, 595, 729, 1423, 1439
PspGI	CCWGG	5 cut(s)	58, 595, 729, 1423, 1439
PspN4I	GGNNCC	3 cut(s)	240, 735, 1293
PspPI	GGNCC	5 cut(s)	1291, 1342, 1421, 1654, 1785
PspPPI	RGGWCCY	2 cut(s)	1291, 1654
PstI	CTGCAG	3 cut(s)	118, 621, 1156
PsuI	RGATCY	5 cut(s)	238, 532, 903, 1519, 1762
RsaI	GTAC	2 cut(s)	910, 1158
RsaNI	GTAC	2 cut(s)	909, 1157
RseI	CAYNNNNRTG	5 cut(s)	21, 348, 1311, 1473, 1533
SacI	GAGCTC	1 cut(s)	401
SapI	GCTCTTC	1 cut(s)	1680
SaqAI	TTAA	8 cut(s)	20, 234, 519, 678, 768, 1404, 1806, 1883
SatI	GCNGC	4 cut(s)	386, 1167, 1617, 1726
Sau3AI	GATC	6 cut(s)	238, 532, 856, 903, 1519, 1762
Sau96I	GGNCC	5 cut(s)	1291, 1342, 1421, 1654, 1785
SbfI	CCTGCAGG	1 cut(s)	621
ScaI	AGTACT	1 cut(s)	1158
SchI	GAGTC	1 cut(s)	293
ScrFI	CCNGG	6 cut(s)	60, 597, 731, 1341, 1425, 1441
SdaI	CCTGCAGG	1 cut(s)	621
SduI	GDGCHC	6 cut(s)	401, 664, 1068, 1279, 1305, 1462
SfaNI	GCATC	4 cut(s)	13, 829, 1001, 1585
SfcI	CTRYAG	3 cut(s)	114, 617, 1152
SinI	GGWCC	4 cut(s)	1291, 1421, 1654, 1785
SmiI	ATTTAAAT	1 cut(s)	21
SmiMI	CAYNNNNRTG	5 cut(s)	21, 348, 1311, 1473, 1533
SmlI	CTYRAG	1 cut(s)	1188
SmoI	CTYRAG	1 cut(s)	1188
Sse8387I	CCTGCAGG	1 cut(s)	621
Sse9I	AATT	9 cut(s)	36, 69, 176, 301, 313, 457, 463, 639, 1245
SsiI	CCGC	2 cut(s)	1725, 1728
SspMI	CTAG	3 cut(s)	1178, 1227, 1251
SstI	GAGCTC	1 cut(s)	401
StyD4I	CCNGG	6 cut(s)	58, 595, 729, 1339, 1423, 1439
StyI	CCWWGG	3 cut(s)	486, 1119, 1788
SwaI	ATTTAAAT	1 cut(s)	21
TaaI	ACNGT	8 cut(s)	1475, 1559, 1648, 1738, 1804, 1834, 1881, 1900
TaiI	ACGT	2 cut(s)	1027, 1465
TaqI	TCGA	3 cut(s)	568, 859, 1309
TasI	AATT	9 cut(s)	36, 69, 176, 301, 313, 457, 463, 639, 1245
TatI	WGTACW	2 cut(s)	908, 1156
TauI	GCSGC	1 cut(s)	1728
TfiI	GAWTC	4 cut(s)	103, 260, 361, 1193
Tru1I	TTAA	8 cut(s)	20, 234, 519, 678, 768, 1404, 1806, 1883
Tru9I	TTAA	8 cut(s)	20, 234, 519, 678, 768, 1404, 1806, 1883
TscAI	CASTG	5 cut(s)	298, 1392, 1480, 1576, 1807
TseFI	GTSAC	4 cut(s)	140, 476, 826, 1732
TseI	GCWGC	3 cut(s)	385, 1166, 1616
Tsp45I	GTSAC	4 cut(s)	140, 476, 826, 1732
TspDTI	ATGAA	9 cut(s)	219, 359, 435, 449, 543, 573, 704, 813, 1545
TspGWI	ACGGA	1 cut(s)	786
TspRI	CASTG	5 cut(s)	298, 1392, 1480, 1576, 1807
VneI	GTGCAC	1 cut(s)	1301
VpaK11BI	GGWCC	4 cut(s)	1291, 1421, 1654, 1785
VspI	ATTAAT	1 cut(s)	678
XapI	RAATTY	5 cut(s)	69, 176, 301, 313, 463
XceI	RCATGY	5 cut(s)	161, 412, 1072, 1316, 1484
XmnI	GAANNNNTTC	2 cut(s)	70, 1209
XspI	CTAG	3 cut(s)	1178, 1227, 1251
ZrmI	AGTACT	1 cut(s)	1158
Zsp2I	ATGCAT	2 cut(s)	6, 1486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.