Diphthamide biosynthesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G15910 AT2G15910 |
| malus_domestica | MD10G1086600.v1.1 |
| prunus_persica | Prupe.8G112600_v2.0.a1 Prupe.8G112600_v2.0.a1 Prupe.8G112600_v2.0.a1 Prupe.8G112600_v2.0.a1 |
| pyrus_communis | pycom05g06430 |
| rosa_chinensis | RchiOBHm_Chr4g0401321 RchiOBHm_Chr6g0259971 RchiOBHm_Chr6g0260171 RchiOBHm_Chr6g0260501 RchiOBHm_Chr6g0260511 RchiOBHm_Chr6g0260771 |
| rosa_laevigata | RLG00000014486 |
| rosa_multiflora | Rmu_sc0000588.1_g000023 Rmu_sc0000588.1_g000039 Rmu_sc0000588.1_g000061 Rmu_sc0010278.1_g000005 Rmu_sc0014629.1_g000012 Rmu_sc0036322.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00201470 Rroxscaffold_7G00207320 Rroxscaffold_7G00207380 |
| rosa_rugosa | Rorug05G0591900 Rorug05G0592500 |
| rosa_samantha | Rh6BG104900 Rh6BG106100 Rh6CG097600 Rh6CG099600 Rh6CG101300 Rh6CG102700 Rh6DG091400 Rh6DG092300 Rh6DG093300 Rh6DG094000 |
| rosa_wichuraiana | Rw6G009430 Rw6G009460 Rw6G009490 Rw6G009860 Rw6G009880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 8, 148 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 115 |
| AjiI | CACGTC | 1 cut(s) | 16 |
| AjnI | CCWGG | 1 cut(s) | 51 |
| AluBI | AGCT | 2 cut(s) | 49, 144 |
| AluI | AGCT | 2 cut(s) | 49, 144 |
| Alw21I | GWGCWC | 1 cut(s) | 51 |
| Alw26I | GTCTC | 1 cut(s) | 75 |
| AsuHPI | GGTGA | 2 cut(s) | 151, 229 |
| BanII | GRGCYC | 2 cut(s) | 51, 219 |
| BbsI | GAAGAC | 1 cut(s) | 111 |
| Bbv12I | GWGCWC | 1 cut(s) | 51 |
| BciT130I | CCWGG | 1 cut(s) | 53 |
| BcoDI | GTCTC | 1 cut(s) | 75 |
| BfaI | CTAG | 1 cut(s) | 141 |
| Bme1390I | CCNGG | 1 cut(s) | 53 |
| BmgBI | CACGTC | 1 cut(s) | 16 |
| BmrFI | CCNGG | 1 cut(s) | 53 |
| BpiI | GAAGAC | 1 cut(s) | 111 |
| BpmI | CTGGAG | 1 cut(s) | 35 |
| BsaJI | CCNNGG | 1 cut(s) | 99 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 115 |
| BseBI | CCWGG | 1 cut(s) | 53 |
| BseDI | CCNNGG | 1 cut(s) | 99 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BsiHKAI | GWGCWC | 1 cut(s) | 51 |
| BsiWI | CGTACG | 1 cut(s) | 6 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BsmAI | GTCTC | 1 cut(s) | 75 |
| Bsp1286I | GDGCHC | 2 cut(s) | 51, 219 |
| Bsp143I | GATC | 1 cut(s) | 21 |
| BssECI | CCNNGG | 1 cut(s) | 99 |
| BssMI | GATC | 1 cut(s) | 21 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| Bst2UI | CCWGG | 1 cut(s) | 53 |
| Bst4CI | ACNGT | 2 cut(s) | 163, 241 |
| Bst6I | CTCTTC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 1 cut(s) | 246 |
| BstKTI | GATC | 1 cut(s) | 24 |
| BstMAI | GTCTC | 1 cut(s) | 75 |
| BstMBI | GATC | 1 cut(s) | 21 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 223 |
| BstNI | CCWGG | 1 cut(s) | 53 |
| BstSCI | CCNGG | 1 cut(s) | 51 |
| BstV2I | GAAGAC | 1 cut(s) | 111 |
| BtrI | CACGTC | 1 cut(s) | 16 |
| Csp6I | GTAC | 2 cut(s) | 7, 147 |
| CviAII | CATG | 3 cut(s) | 69, 75, 187 |
| CviJI | RGCY | 3 cut(s) | 49, 144, 217 |
| CviKI_1 | RGCY | 3 cut(s) | 49, 144, 217 |
| CviQI | GTAC | 2 cut(s) | 7, 147 |
| DdeI | CTNAG | 1 cut(s) | 246 |
| DpnI | GATC | 1 cut(s) | 23 |
| DpnII | GATC | 1 cut(s) | 21 |
| Eam1104I | CTCTTC | 1 cut(s) | 117 |
| EarI | CTCTTC | 1 cut(s) | 117 |
| Ecl136II | GAGCTC | 1 cut(s) | 49 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| Eco24I | GRGCYC | 2 cut(s) | 51, 219 |
| Eco53kI | GAGCTC | 1 cut(s) | 49 |
| EcoICRI | GAGCTC | 1 cut(s) | 49 |
| EcoRII | CCWGG | 1 cut(s) | 51 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| EcoT38I | GRGCYC | 2 cut(s) | 51, 219 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| FaeI | CATG | 3 cut(s) | 72, 78, 190 |
| FaiI | YATR | 6 cut(s) | 32, 58, 64, 70, 76, 188 |
| FatI | CATG | 3 cut(s) | 68, 74, 186 |
| FriOI | GRGCYC | 2 cut(s) | 51, 219 |
| FspBI | CTAG | 1 cut(s) | 141 |
| GsuI | CTGGAG | 1 cut(s) | 35 |
| Hin1II | CATG | 3 cut(s) | 72, 78, 190 |
| HphI | GGTGA | 2 cut(s) | 151, 229 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188III | TCNNGA | 1 cut(s) | 91 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| Hpy99I | CGWCG | 4 cut(s) | 14, 17, 167, 245 |
| HpyCH4III | ACNGT | 2 cut(s) | 163, 241 |
| HpyCH4IV | ACGT | 1 cut(s) | 15 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 223 |
| HpyF3I | CTNAG | 1 cut(s) | 246 |
| HpySE526I | ACGT | 1 cut(s) | 15 |
| Hsp92II | CATG | 3 cut(s) | 72, 78, 190 |
| Kzo9I | GATC | 1 cut(s) | 21 |
| LmnI | GCTCC | 1 cut(s) | 54 |
| LpnPI | CCDG | 4 cut(s) | 38, 65, 104, 122 |
| MaeI | CTAG | 1 cut(s) | 141 |
| MaeII | ACGT | 1 cut(s) | 15 |
| MalI | GATC | 1 cut(s) | 23 |
| MboI | GATC | 1 cut(s) | 21 |
| MboII | GAAGA | 4 cut(s) | 38, 116, 134, 191 |
| MhlI | GDGCHC | 2 cut(s) | 51, 219 |
| MluCI | AATT | 1 cut(s) | 113 |
| MnlI | CCTC | 2 cut(s) | 229, 245 |
| MslI | CAYNNNNRTG | 2 cut(s) | 67, 73 |
| MspR9I | CCNGG | 1 cut(s) | 53 |
| MvaI | CCWGG | 1 cut(s) | 53 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 223 |
| NdeII | GATC | 1 cut(s) | 21 |
| NlaIII | CATG | 3 cut(s) | 72, 78, 190 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 21 |
| Pfl23II | CGTACG | 1 cut(s) | 6 |
| Psp124BI | GAGCTC | 1 cut(s) | 51 |
| Psp6I | CCWGG | 1 cut(s) | 51 |
| PspGI | CCWGG | 1 cut(s) | 51 |
| PspLI | CGTACG | 1 cut(s) | 6 |
| RsaI | GTAC | 2 cut(s) | 8, 148 |
| RsaNI | GTAC | 2 cut(s) | 7, 147 |
| RseI | CAYNNNNRTG | 2 cut(s) | 67, 73 |
| SacI | GAGCTC | 1 cut(s) | 51 |
| Sau3AI | GATC | 1 cut(s) | 21 |
| ScrFI | CCNGG | 1 cut(s) | 53 |
| SduI | GDGCHC | 2 cut(s) | 51, 219 |
| SetI | ASST | 4 cut(s) | 18, 51, 111, 146 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 67, 73 |
| Sse9I | AATT | 1 cut(s) | 113 |
| SspMI | CTAG | 1 cut(s) | 141 |
| SstI | GAGCTC | 1 cut(s) | 51 |
| StyD4I | CCNGG | 1 cut(s) | 51 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TaaI | ACNGT | 2 cut(s) | 163, 241 |
| TaiI | ACGT | 1 cut(s) | 18 |
| TaqI | TCGA | 2 cut(s) | 24, 177 |
| TasI | AATT | 1 cut(s) | 113 |
| TatI | WGTACW | 1 cut(s) | 146 |
| TspDTI | ATGAA | 1 cut(s) | 175 |
| XspI | CTAG | 1 cut(s) | 141 |