Diphthamide biosynthesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G15910 AT2G15910 |
| malus_domestica | MD10G1086600.v1.1 |
| prunus_persica | Prupe.8G112600_v2.0.a1 Prupe.8G112600_v2.0.a1 Prupe.8G112600_v2.0.a1 Prupe.8G112600_v2.0.a1 |
| pyrus_communis | pycom05g06430 |
| rosa_chinensis | RchiOBHm_Chr4g0401321 RchiOBHm_Chr6g0259971 RchiOBHm_Chr6g0260171 RchiOBHm_Chr6g0260501 RchiOBHm_Chr6g0260511 RchiOBHm_Chr6g0260771 |
| rosa_laevigata | RLG00000014486 |
| rosa_multiflora | Rmu_sc0000588.1_g000023 Rmu_sc0000588.1_g000039 Rmu_sc0000588.1_g000061 Rmu_sc0010278.1_g000005 Rmu_sc0014629.1_g000012 Rmu_sc0036322.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00201470 Rroxscaffold_7G00207320 Rroxscaffold_7G00207380 |
| rosa_rugosa | Rorug05G0591900 Rorug05G0592500 |
| rosa_samantha | Rh6BG104900 Rh6BG106100 Rh6CG097600 Rh6CG099600 Rh6CG101300 Rh6CG102700 Rh6DG091400 Rh6DG092300 Rh6DG093300 Rh6DG094000 |
| rosa_wichuraiana | Rw6G009430 Rw6G009460 Rw6G009490 Rw6G009860 Rw6G009880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 135 |
| AciI | CCGC | 1 cut(s) | 78 |
| AfaI | GTAC | 3 cut(s) | 8, 59, 148 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 115 |
| AjiI | CACGTC | 1 cut(s) | 16 |
| AluBI | AGCT | 1 cut(s) | 49 |
| AluI | AGCT | 1 cut(s) | 49 |
| Alw26I | GTCTC | 1 cut(s) | 75 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 200 |
| AsuHPI | GGTGA | 3 cut(s) | 88, 151, 220 |
| BaeGI | GKGCMC | 2 cut(s) | 74, 140 |
| BanI | GGYRCC | 1 cut(s) | 135 |
| BanII | GRGCYC | 1 cut(s) | 210 |
| BbsI | GAAGAC | 2 cut(s) | 111, 186 |
| BcoDI | GTCTC | 1 cut(s) | 75 |
| BfaI | CTAG | 1 cut(s) | 141 |
| BmgBI | CACGTC | 1 cut(s) | 16 |
| BmiI | GGNNCC | 1 cut(s) | 137 |
| BpiI | GAAGAC | 2 cut(s) | 111, 186 |
| Bsa29I | ATCGAT | 1 cut(s) | 189 |
| BsaJI | CCNNGG | 1 cut(s) | 99 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 115 |
| BseCI | ATCGAT | 1 cut(s) | 189 |
| BseDI | CCNNGG | 1 cut(s) | 99 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BseSI | GKGCMC | 2 cut(s) | 74, 140 |
| BshNI | GGYRCC | 1 cut(s) | 135 |
| BshVI | ATCGAT | 1 cut(s) | 189 |
| BsiWI | CGTACG | 1 cut(s) | 6 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BsmAI | GTCTC | 1 cut(s) | 75 |
| Bsp1286I | GDGCHC | 3 cut(s) | 74, 140, 210 |
| Bsp143I | GATC | 3 cut(s) | 21, 93, 126 |
| BspACI | CCGC | 1 cut(s) | 78 |
| BspDI | ATCGAT | 1 cut(s) | 189 |
| BspLI | GGNNCC | 1 cut(s) | 137 |
| BspT107I | GGYRCC | 1 cut(s) | 135 |
| BssECI | CCNNGG | 1 cut(s) | 99 |
| BssMI | GATC | 3 cut(s) | 21, 93, 126 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| Bst4CI | ACNGT | 2 cut(s) | 163, 232 |
| Bst6I | CTCTTC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 1 cut(s) | 237 |
| BstKTI | GATC | 3 cut(s) | 24, 96, 129 |
| BstMAI | GTCTC | 1 cut(s) | 75 |
| BstMBI | GATC | 3 cut(s) | 21, 93, 126 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 205, 214 |
| BstSLI | GKGCMC | 2 cut(s) | 74, 140 |
| BstV2I | GAAGAC | 2 cut(s) | 111, 186 |
| Bsu15I | ATCGAT | 1 cut(s) | 189 |
| BsuTUI | ATCGAT | 1 cut(s) | 189 |
| BtrI | CACGTC | 1 cut(s) | 16 |
| ClaI | ATCGAT | 1 cut(s) | 189 |
| Csp6I | GTAC | 3 cut(s) | 7, 58, 147 |
| CviAII | CATG | 1 cut(s) | 75 |
| CviJI | RGCY | 3 cut(s) | 49, 199, 208 |
| CviKI_1 | RGCY | 3 cut(s) | 49, 199, 208 |
| CviQI | GTAC | 3 cut(s) | 7, 58, 147 |
| DdeI | CTNAG | 1 cut(s) | 237 |
| DpnI | GATC | 3 cut(s) | 23, 95, 128 |
| DpnII | GATC | 3 cut(s) | 21, 93, 126 |
| Eam1104I | CTCTTC | 1 cut(s) | 117 |
| EarI | CTCTTC | 1 cut(s) | 117 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| Eco24I | GRGCYC | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| EcoT38I | GRGCYC | 1 cut(s) | 210 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| FaeI | CATG | 1 cut(s) | 78 |
| FaiI | YATR | 3 cut(s) | 32, 64, 76 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 185, 217 |
| FatI | CATG | 1 cut(s) | 74 |
| FriOI | GRGCYC | 1 cut(s) | 210 |
| FspBI | CTAG | 1 cut(s) | 141 |
| Hin1II | CATG | 1 cut(s) | 78 |
| HphI | GGTGA | 3 cut(s) | 88, 151, 220 |
| Hpy166II | GTNNAC | 2 cut(s) | 60, 169 |
| Hpy188III | TCNNGA | 1 cut(s) | 91 |
| Hpy8I | GTNNAC | 2 cut(s) | 60, 169 |
| Hpy99I | CGWCG | 4 cut(s) | 14, 17, 47, 167 |
| HpyAV | CCTTC | 1 cut(s) | 211 |
| HpyCH4III | ACNGT | 2 cut(s) | 163, 232 |
| HpyCH4IV | ACGT | 1 cut(s) | 15 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 205, 214 |
| HpyF3I | CTNAG | 1 cut(s) | 237 |
| HpySE526I | ACGT | 1 cut(s) | 15 |
| Hsp92II | CATG | 1 cut(s) | 78 |
| Kzo9I | GATC | 3 cut(s) | 21, 93, 126 |
| LpnPI | CCDG | 2 cut(s) | 104, 122 |
| MaeI | CTAG | 1 cut(s) | 141 |
| MaeII | ACGT | 1 cut(s) | 15 |
| MalI | GATC | 3 cut(s) | 23, 95, 128 |
| MboI | GATC | 3 cut(s) | 21, 93, 126 |
| MboII | GAAGA | 4 cut(s) | 38, 116, 134, 191 |
| MhlI | GDGCHC | 3 cut(s) | 74, 140, 210 |
| MluCI | AATT | 1 cut(s) | 113 |
| MnlI | CCTC | 2 cut(s) | 220, 236 |
| MroXI | GAANNNNTTC | 1 cut(s) | 200 |
| MslI | CAYNNNNRTG | 1 cut(s) | 67 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 205, 214 |
| NdeII | GATC | 3 cut(s) | 21, 93, 126 |
| NlaIII | CATG | 1 cut(s) | 78 |
| NlaIV | GGNNCC | 1 cut(s) | 137 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 21 |
| PdmI | GAANNNNTTC | 1 cut(s) | 200 |
| Pfl23II | CGTACG | 1 cut(s) | 6 |
| PspLI | CGTACG | 1 cut(s) | 6 |
| PspN4I | GGNNCC | 1 cut(s) | 137 |
| RsaI | GTAC | 3 cut(s) | 8, 59, 148 |
| RsaNI | GTAC | 3 cut(s) | 7, 58, 147 |
| RseI | CAYNNNNRTG | 1 cut(s) | 67 |
| Sau3AI | GATC | 3 cut(s) | 21, 93, 126 |
| SduI | GDGCHC | 3 cut(s) | 74, 140, 210 |
| SetI | ASST | 3 cut(s) | 18, 51, 111 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 67 |
| Sse9I | AATT | 1 cut(s) | 113 |
| SsiI | CCGC | 1 cut(s) | 78 |
| SspMI | CTAG | 1 cut(s) | 141 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TaaI | ACNGT | 2 cut(s) | 163, 232 |
| TaiI | ACGT | 1 cut(s) | 18 |
| TaqI | TCGA | 4 cut(s) | 24, 177, 189, 204 |
| TasI | AATT | 1 cut(s) | 113 |
| TatI | WGTACW | 1 cut(s) | 146 |
| TspDTI | ATGAA | 1 cut(s) | 175 |
| XmnI | GAANNNNTTC | 1 cut(s) | 200 |
| XspI | CTAG | 1 cut(s) | 141 |