MULE transposase domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g29511 FvH4_6g24082 FvH4_7g16801 FvH4_7g16802 |
| rosa_multiflora | Rmu_sc0003594.1_g000006 Rmu_sc0010463.1_g000007 Rmu_ssc0000404.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00316740 |
| rosa_rugosa | Rorug01G0114800 Rorug02G0237500 Rorug04G0022000 Rorug04G0234800 Rorug06G0053400 Rorug06G0059100 |
| rosa_wichuraiana | Rw0G017920 Rw0G022210 Rw1G011530 Rw5G031600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 221 |
| AgsI | TTSAA | 4 cut(s) | 59, 185, 191, 350 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 233, 265 |
| AluBI | AGCT | 3 cut(s) | 29, 87, 96 |
| AluI | AGCT | 3 cut(s) | 29, 87, 96 |
| Alw26I | GTCTC | 1 cut(s) | 274 |
| AsuHPI | GGTGA | 1 cut(s) | 272 |
| BanII | GRGCYC | 1 cut(s) | 203 |
| BccI | CCATC | 2 cut(s) | 148, 391 |
| BcoDI | GTCTC | 1 cut(s) | 274 |
| BfaI | CTAG | 1 cut(s) | 30 |
| BseGI | GGATG | 1 cut(s) | 340 |
| BsmAI | GTCTC | 1 cut(s) | 274 |
| BsmI | GAATGC | 1 cut(s) | 373 |
| Bsp1286I | GDGCHC | 1 cut(s) | 203 |
| Bsp143I | GATC | 1 cut(s) | 193 |
| BspACI | CCGC | 1 cut(s) | 221 |
| BssMI | GATC | 1 cut(s) | 193 |
| Bst4CI | ACNGT | 1 cut(s) | 128 |
| BstF5I | GGATG | 1 cut(s) | 340 |
| BstKTI | GATC | 1 cut(s) | 196 |
| BstMAI | GTCTC | 1 cut(s) | 274 |
| BstMBI | GATC | 1 cut(s) | 193 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 93, 377 |
| BtsCI | GGATG | 1 cut(s) | 340 |
| CviAII | CATG | 3 cut(s) | 121, 152, 224 |
| CviJI | RGCY | 6 cut(s) | 29, 48, 87, 96, 201, 229 |
| CviKI_1 | RGCY | 6 cut(s) | 29, 48, 87, 96, 201, 229 |
| DpnI | GATC | 1 cut(s) | 195 |
| DpnII | GATC | 1 cut(s) | 193 |
| Eco24I | GRGCYC | 1 cut(s) | 203 |
| EcoT38I | GRGCYC | 1 cut(s) | 203 |
| FaeI | CATG | 3 cut(s) | 124, 155, 227 |
| FaiI | YATR | 6 cut(s) | 79, 122, 153, 225, 274, 415 |
| FatI | CATG | 3 cut(s) | 120, 151, 223 |
| FauI | CCCGC | 1 cut(s) | 228 |
| FokI | GGATG | 1 cut(s) | 347 |
| FriOI | GRGCYC | 1 cut(s) | 203 |
| FspBI | CTAG | 1 cut(s) | 30 |
| Hin1II | CATG | 3 cut(s) | 124, 155, 227 |
| HinfI | GANTC | 2 cut(s) | 70, 325 |
| HphI | GGTGA | 1 cut(s) | 272 |
| Hpy188I | TCNGA | 1 cut(s) | 198 |
| HpyAV | CCTTC | 1 cut(s) | 401 |
| HpyCH4III | ACNGT | 1 cut(s) | 128 |
| HpyCH4V | TGCA | 2 cut(s) | 209, 413 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 93, 377 |
| Hsp92II | CATG | 3 cut(s) | 124, 155, 227 |
| Kzo9I | GATC | 1 cut(s) | 193 |
| LmnI | GCTCC | 2 cut(s) | 355, 385 |
| MaeI | CTAG | 1 cut(s) | 30 |
| MaeIII | GTNAC | 1 cut(s) | 41 |
| MalI | GATC | 1 cut(s) | 195 |
| MboI | GATC | 1 cut(s) | 193 |
| MboII | GAAGA | 4 cut(s) | 32, 203, 302, 381 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MhlI | GDGCHC | 1 cut(s) | 203 |
| MluCI | AATT | 3 cut(s) | 171, 204, 345 |
| MlyI | GAGTC | 1 cut(s) | 334 |
| MmeI | TCCRAC | 1 cut(s) | 231 |
| MnlI | CCTC | 1 cut(s) | 280 |
| MslI | CAYNNNNRTG | 1 cut(s) | 156 |
| MunI | CAATTG | 1 cut(s) | 204 |
| Mva1269I | GAATGC | 1 cut(s) | 373 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 93, 377 |
| NdeII | GATC | 1 cut(s) | 193 |
| NlaIII | CATG | 3 cut(s) | 124, 155, 227 |
| NmuCI | GTSAC | 1 cut(s) | 41 |
| PctI | GAATGC | 1 cut(s) | 373 |
| PfeI | GAWTC | 1 cut(s) | 70 |
| PleI | GAGTC | 1 cut(s) | 333 |
| PpsI | GAGTC | 1 cut(s) | 333 |
| RseI | CAYNNNNRTG | 1 cut(s) | 156 |
| Sau3AI | GATC | 1 cut(s) | 193 |
| SchI | GAGTC | 1 cut(s) | 334 |
| SduI | GDGCHC | 1 cut(s) | 203 |
| SetI | ASST | 6 cut(s) | 31, 64, 89, 98, 364, 412 |
| SgeI | CNNG | 9 cut(s) | 42, 79, 105, 128, 133, 164, 200, 232, 236 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 156 |
| Sse9I | AATT | 3 cut(s) | 171, 204, 345 |
| SsiI | CCGC | 1 cut(s) | 221 |
| SspMI | CTAG | 1 cut(s) | 30 |
| TaaI | ACNGT | 1 cut(s) | 128 |
| TasI | AATT | 3 cut(s) | 171, 204, 345 |
| TfiI | GAWTC | 1 cut(s) | 70 |
| TseFI | GTSAC | 1 cut(s) | 41 |
| Tsp45I | GTSAC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 2 cut(s) | 33, 137 |
| TspGWI | ACGGA | 1 cut(s) | 368 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 309 |
| XspI | CTAG | 1 cut(s) | 30 |