MULE transposase domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g29511 FvH4_6g24082 FvH4_7g16801 FvH4_7g16802 |
| rosa_multiflora | Rmu_sc0003594.1_g000006 Rmu_sc0010463.1_g000007 Rmu_ssc0000404.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00316740 |
| rosa_rugosa | Rorug01G0114800 Rorug02G0237500 Rorug04G0022000 Rorug04G0234800 Rorug06G0053400 Rorug06G0059100 |
| rosa_wichuraiana | Rw0G017920 Rw0G022210 Rw1G011530 Rw5G031600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 10 |
| AciI | CCGC | 1 cut(s) | 101 |
| AgsI | TTSAA | 2 cut(s) | 71, 230 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 113, 145 |
| Alw26I | GTCTC | 2 cut(s) | 49, 154 |
| AsuHPI | GGTGA | 1 cut(s) | 152 |
| BbsI | GAAGAC | 1 cut(s) | 306 |
| BccI | CCATC | 3 cut(s) | 28, 167, 271 |
| BcoDI | GTCTC | 2 cut(s) | 49, 154 |
| BpiI | GAAGAC | 1 cut(s) | 306 |
| BseGI | GGATG | 1 cut(s) | 220 |
| BsmAI | GTCTC | 2 cut(s) | 49, 154 |
| BsmBI | CGTCTC | 1 cut(s) | 49 |
| BsmI | GAATGC | 2 cut(s) | 253, 316 |
| Bsp143I | GATC | 1 cut(s) | 73 |
| BspACI | CCGC | 1 cut(s) | 101 |
| BssMI | GATC | 1 cut(s) | 73 |
| Bst4CI | ACNGT | 1 cut(s) | 8 |
| BstDEI | CTNAG | 1 cut(s) | 295 |
| BstF5I | GGATG | 1 cut(s) | 220 |
| BstKTI | GATC | 1 cut(s) | 76 |
| BstMAI | GTCTC | 2 cut(s) | 49, 154 |
| BstMBI | GATC | 1 cut(s) | 73 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 257 |
| BstV2I | GAAGAC | 1 cut(s) | 306 |
| BtsCI | GGATG | 1 cut(s) | 220 |
| CviAII | CATG | 1 cut(s) | 104 |
| CviJI | RGCY | 2 cut(s) | 81, 109 |
| CviKI_1 | RGCY | 2 cut(s) | 81, 109 |
| DdeI | CTNAG | 1 cut(s) | 295 |
| DpnI | GATC | 1 cut(s) | 75 |
| DpnII | GATC | 1 cut(s) | 73 |
| Esp3I | CGTCTC | 1 cut(s) | 49 |
| FaeI | CATG | 1 cut(s) | 107 |
| FaiI | YATR | 6 cut(s) | 33, 78, 105, 154, 306, 323 |
| FatI | CATG | 1 cut(s) | 103 |
| FauI | CCCGC | 1 cut(s) | 108 |
| FblI | GTMKAC | 1 cut(s) | 10 |
| FokI | GGATG | 1 cut(s) | 227 |
| Hin1II | CATG | 1 cut(s) | 107 |
| HinfI | GANTC | 1 cut(s) | 205 |
| HphI | GGTGA | 1 cut(s) | 152 |
| Hpy166II | GTNNAC | 1 cut(s) | 11 |
| Hpy8I | GTNNAC | 1 cut(s) | 11 |
| HpyAV | CCTTC | 1 cut(s) | 282 |
| HpyCH4III | ACNGT | 1 cut(s) | 8 |
| HpyCH4V | TGCA | 1 cut(s) | 89 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 257 |
| HpyF3I | CTNAG | 1 cut(s) | 295 |
| Hsp92II | CATG | 1 cut(s) | 107 |
| Kzo9I | GATC | 1 cut(s) | 73 |
| LmnI | GCTCC | 2 cut(s) | 235, 265 |
| MalI | GATC | 1 cut(s) | 75 |
| MboI | GATC | 1 cut(s) | 73 |
| MboII | GAAGA | 4 cut(s) | 83, 182, 261, 311 |
| MfeI | CAATTG | 1 cut(s) | 190 |
| MluCI | AATT | 4 cut(s) | 51, 84, 190, 225 |
| MlyI | GAGTC | 1 cut(s) | 214 |
| MmeI | TCCRAC | 1 cut(s) | 111 |
| MnlI | CCTC | 1 cut(s) | 160 |
| MunI | CAATTG | 1 cut(s) | 190 |
| Mva1269I | GAATGC | 2 cut(s) | 253, 316 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 257 |
| NdeII | GATC | 1 cut(s) | 73 |
| NlaIII | CATG | 1 cut(s) | 107 |
| PctI | GAATGC | 2 cut(s) | 253, 316 |
| PleI | GAGTC | 1 cut(s) | 213 |
| PpsI | GAGTC | 1 cut(s) | 213 |
| Sau3AI | GATC | 1 cut(s) | 73 |
| SchI | GAGTC | 1 cut(s) | 214 |
| SetI | ASST | 2 cut(s) | 16, 244 |
| SgeI | CNNG | 4 cut(s) | 80, 112, 116, 295 |
| Sse9I | AATT | 4 cut(s) | 51, 84, 190, 225 |
| SsiI | CCGC | 1 cut(s) | 101 |
| TaaI | ACNGT | 1 cut(s) | 8 |
| TasI | AATT | 4 cut(s) | 51, 84, 190, 225 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 248 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 189 |
| XmiI | GTMKAC | 1 cut(s) | 10 |