Rorug01G0114800

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000138
Physical Location & Seq
Reverse (-)
20218062 .. 20228026
9965 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0114800.1

Sequence Viewer

Length: 1506 bp
ATGCATTACTGGGTTCGAGCTTCTTCCTCTGATTTCGCCGGAACTCTTCCCCAACCTCGCAGTGGTCACACTGCCGTCAACATTGGAAAATCCAAAGTGATCGTATTCGGAGGCCTTGTAGAGAAGAGGTTTCTCAACGATATCGTCGTCTATGACATTGATAATAAACTATGGTATAAGCCAGAGTGCACTGGCGGCACTGATGGACAAGTGGGTCCAAGTCCTCGGGCATTTCACGTTGCTGTTGTGATTGATTGTCATATGTTCATCTTTGGTGGGCGTTGTGGTGGCAAGAGGTTAGGTGACTTTTGGGTCCTAGATACTGATATATGGCAATGGTCAGAGTTGACAAGCTTTGGTGACTTACCCTCAGCACGAGACTTTGCTGCAGCTTCAGCTATTGGAAATCAGAAAATTATTATGTATGGTGGCTGGGATGGTAAAAAGTGGTTGTCAGATGTGTACGTCTTGGACACAATATCACTAGAGTGGATGGAACTGTCAATTACTGGATCACTGCCACCACCTAGATGTGGCCACACAGCTACTATGGTTGAAAAACGGTTGCTTGTCTATGGCGGCAGAGGAGGTGGAGGTCCTATCATGGGTGATTTATGGGCTTTGAAGGGTGTAATCGCAGAAGAAAATGAAACACCTGGATGGACCCAACTGAAGCTTCCAGGTCAAGCTCCTTCCGCACGTTGTGGCCATACCATCACATCTGGAGGACACTATCTGTTGCTATTTGGAGGCCATGGAACTGGTGGCTGGTTGAGTCGTTATGACATCTATTACAATGACTGCATCATCTTAGACAGGGTTTCTGCACAGTGGAAGCGGTTACCTACTGGCAATGAACCCCCTCCTGCTCGAGCATACCATTCACTGACATGCATTGGCTCACGTTATCTGTTATTTGGTGGCTTTGATGGCAAATCCACATTTGGTGATCTATGGTGGTTGGTTCCTGAAGAGGACCCTATTGCAAACAGGCTTCGTGCAACTTCACCAACCAATATTACCGAAAATAAGGATGTCATGATGGAAAATAATAATGTCCAATCTGAACTCAAGGAAAGCGAAACAGAAGAATCTGCCGTCTCAGAATTGCGAAAAAGATTAGGAATATCAGTTTCTCTCCCTAGTAATGGGGTTCCTGTTGTGGATGAGTTAGAAGACAGAGAACTTATTGAACTAGCTTCAAGTTTGGTTGGAGAAAGAGATACTACTCGTGAACATATTTCACATATTCAGGCACTTCGTGACCACTGGAGGAATTCTACTGCAAGGTTCATACCACTTAAAGAGCTTGGGCCTTTGCTTCGGGACTACCAACGCCAAATTACTCGTCGTCACCTGGAGAATGGCGGATCTGATCCCGAGTTGGTTGAGTCTGGTTCTCCTGGAAAAGTGGCTTATGGTTTCTATCATATTAGAAATGTTAATCAGTTGCGTATGGATGACATTCCAAAGCTGCTGGCAGAGTACAAACAACTACTTAATTAA

Protein Analysis

501

Amino Acids

55.77

Weight (kDa)

5.99

Isoelectric Point (pI)

48.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 10 - 194 4.6e-53 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 12 - 159 8.9e-30 FBX42, beta-propeller domain
Kelch_HCF PF13854 12 - 93 3.1e-11 Host cell factor, Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 72 - 312 8.5e-24 Attractin/LZTR1 beta-propeller
Kelch_1 PF01344 75 - 119 1.7e-09 Kelch motif
Kelch_HCF PF13854 96 - 145 5e-06 Host cell factor, Kelch-repeats domain
Beta-prop_FBX42 PF13415 131 - 209 2.5e-15 FBX42, beta-propeller domain
Kelch_HCF PF13854 137 - 194 1.6e-07 Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 217 - 324 5.4e-20 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 219 - 321 1.2e-15 FBX42, beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 213, 311
AciI CCGC 5 cut(s) 195, 579, 696, 838, 1368
AclWI GGATC 3 cut(s) 520, 1370, 1378
AcoI YGGCCR 2 cut(s) 535, 706
AcsI RAATTY 1 cut(s) 1276
AcuI CTGAAG 3 cut(s) 378, 692, 990
AdeI CACNNNGTG 2 cut(s) 704, 1262
AfaI GTAC 2 cut(s) 464, 1487
AfiI CCNNNNNNNGG 4 cut(s) 62, 533, 605, 1148
AgsI TTSAA 4 cut(s) 557, 625, 1193, 1203
AjnI CCWGG 4 cut(s) 655, 679, 1356, 1402
AjuI GAANNNNNNNTTGG 2 cut(s) 660, 692
AleI CACNNNNGTG 1 cut(s) 487
Alw21I GWGCWC 1 cut(s) 191
Alw26I GTCTC 2 cut(s) 372, 1105
Alw44I GTGCAC 1 cut(s) 187
AlwI GGATC 3 cut(s) 520, 1370, 1378
Ama87I CYCGRG 3 cut(s) 225, 870, 1379
AoxI GGCC 5 cut(s) 112, 535, 706, 751, 1313
ApaLI GTGCAC 1 cut(s) 187
ApeKI GCWGC 3 cut(s) 386, 389, 1474
ApoI RAATTY 1 cut(s) 1276
ArsI GACNNNNNNTTYG 2 cut(s) 1333, 1365
AspS9I GGNCC 6 cut(s) 215, 313, 596, 663, 976, 1313
AsuHPI GGTGA 6 cut(s) 314, 371, 620, 959, 999, 1346
AvaI CYCGRG 3 cut(s) 225, 870, 1379
AvaII GGWCC 5 cut(s) 215, 313, 596, 663, 976
BaeGI GKGCMC 1 cut(s) 191
BalI TGGCCA 2 cut(s) 537, 708
BauI CACGAG 2 cut(s) 375, 1230
BbsI GAAGAC 1 cut(s) 1182
Bbv12I GWGCWC 1 cut(s) 191
BbvCI CCTCAGC 1 cut(s) 370
BbvI GCAGC 3 cut(s) 373, 401, 1461
BccI CCATC 7 cut(s) 197, 431, 487, 654, 722, 923, 1036
BceAI ACGGC 2 cut(s) 59, 1082
BciT130I CCWGG 4 cut(s) 657, 681, 1358, 1404
BcoDI GTCTC 2 cut(s) 372, 1105
BfaI CTAG 5 cut(s) 317, 485, 528, 1143, 1196
BfmI CTRYAG 1 cut(s) 387
BisI GCNGC 5 cut(s) 196, 387, 390, 580, 1475
BlsI GCNGC 5 cut(s) 197, 388, 391, 581, 1476
Bme1390I CCNGG 4 cut(s) 657, 681, 1358, 1404
Bme18I GGWCC 5 cut(s) 215, 313, 596, 663, 976
BmeT110I CYCGRG 3 cut(s) 225, 870, 1379
BmgT120I GGNCC 6 cut(s) 215, 313, 596, 663, 976, 1313
BmiI GGNNCC 6 cut(s) 216, 314, 665, 966, 978, 1155
BmrFI CCNGG 4 cut(s) 657, 681, 1358, 1404
BmrI ACTGGG 1 cut(s) 19
BmsI GCATC 1 cut(s) 813
BmuI ACTGGG 1 cut(s) 19
BpiI GAAGAC 1 cut(s) 1182
BpmI CTGGAG 3 cut(s) 744, 1291, 1379
Bpu10I CCTNAGC 1 cut(s) 370
BpuEI CTTGAG 1 cut(s) 1055
BsaJI CCNNGG 2 cut(s) 224, 754
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsc4I CCNNNNNNNGG 4 cut(s) 62, 533, 605, 1148
Bse1I ACTGG 6 cut(s) 14, 196, 514, 766, 853, 1274
Bse3DI GCAATG 2 cut(s) 341, 859
BseBI CCWGG 4 cut(s) 657, 681, 1358, 1404
BseDI CCNNGG 2 cut(s) 224, 754
BseGI GGATG 6 cut(s) 442, 498, 665, 1039, 1171, 1465
BseLI CCNNNNNNNGG 4 cut(s) 62, 533, 605, 1148
BseMI GCAATG 2 cut(s) 341, 859
BseMII CTCAG 2 cut(s) 384, 1116
BseNI ACTGG 6 cut(s) 14, 196, 514, 766, 853, 1274
BseRI GAGGAG 1 cut(s) 600
BseSI GKGCMC 1 cut(s) 191
BseXI GCAGC 3 cut(s) 373, 401, 1461
BseYI CCCAGC 1 cut(s) 432
BsgI GTGCAG 1 cut(s) 810
BshFI GGCC 5 cut(s) 114, 537, 708, 753, 1315
BsiHKAI GWGCWC 1 cut(s) 191
BsiHKCI CYCGRG 3 cut(s) 225, 870, 1379
BsiSI CCGG 1 cut(s) 39
BslFI GGGAC 1 cut(s) 1340
BslI CCNNNNNNNGG 4 cut(s) 62, 533, 605, 1148
BsmAI GTCTC 2 cut(s) 372, 1105
BsmBI CGTCTC 1 cut(s) 1105
BsmFI GGGAC 1 cut(s) 1340
BsnI GGCC 5 cut(s) 114, 537, 708, 753, 1315
BsoBI CYCGRG 3 cut(s) 225, 870, 1379
Bsp1286I GDGCHC 1 cut(s) 191
Bsp143I GATC 5 cut(s) 99, 512, 949, 1370, 1375
Bsp19I CCATGG 1 cut(s) 754
BspACI CCGC 5 cut(s) 195, 579, 696, 838, 1368
BspANI GGCC 5 cut(s) 114, 537, 708, 753, 1315
BspCNI CTCAG 2 cut(s) 383, 1115
BspHI TCATGA 1 cut(s) 1038
BspLI GGNNCC 6 cut(s) 216, 314, 665, 966, 978, 1155
BspMAI CTGCAG 1 cut(s) 391
BspPI GGATC 3 cut(s) 520, 1370, 1378
BsrDI GCAATG 2 cut(s) 341, 859
BsrI ACTGG 6 cut(s) 14, 196, 514, 766, 853, 1274
BssECI CCNNGG 2 cut(s) 224, 754
BssMI GATC 5 cut(s) 99, 512, 949, 1370, 1375
BssSI CACGAG 2 cut(s) 375, 1230
BssT1I CCWWGG 1 cut(s) 754
Bst2BI CACGAG 2 cut(s) 375, 1230
Bst2UI CCWGG 4 cut(s) 657, 681, 1358, 1404
Bst4CI ACNGT 3 cut(s) 501, 564, 831
Bst6I CTCTTC 3 cut(s) 51, 119, 966
BstC8I GCNNGC 1 cut(s) 1479
BstDEI CTNAG 3 cut(s) 370, 811, 1102
BstDSI CCRYGG 1 cut(s) 754
BstEII GGTNACC 1 cut(s) 840
BstF5I GGATG 6 cut(s) 442, 498, 665, 1039, 1171, 1465
BstKTI GATC 5 cut(s) 102, 515, 952, 1373, 1378
BstMAI GTCTC 2 cut(s) 372, 1105
BstMBI GATC 5 cut(s) 99, 512, 949, 1370, 1375
BstMWI GCNNNNNNNGC 4 cut(s) 195, 395, 695, 930
BstNI CCWGG 4 cut(s) 657, 681, 1358, 1404
BstNSI RCATGY 1 cut(s) 894
BstPI GGTNACC 1 cut(s) 840
BstSCI CCNGG 4 cut(s) 655, 679, 1356, 1402
BstSFI CTRYAG 1 cut(s) 387
BstSLI GKGCMC 1 cut(s) 191
BstV1I GCAGC 3 cut(s) 373, 401, 1461
BstV2I GAAGAC 1 cut(s) 1182
BstX2I RGATCY 1 cut(s) 1370
BstXI CCANNNNNNTGG 1 cut(s) 761
BstYI RGATCY 1 cut(s) 1370
BsuRI GGCC 5 cut(s) 114, 537, 708, 753, 1315
BtgI CCRYGG 1 cut(s) 754
BtsCI GGATG 6 cut(s) 442, 498, 665, 1039, 1171, 1465
BtsI GCAGTG 3 cut(s) 67, 69, 515
BtsIMutI CAGTG 8 cut(s) 67, 69, 189, 198, 515, 836, 884, 1267
Cac8I GCNNGC 1 cut(s) 1479
CciI TCATGA 1 cut(s) 1038
Cfr13I GGNCC 6 cut(s) 215, 313, 596, 663, 976, 1313
Csp6I GTAC 2 cut(s) 463, 1486
CviAII CATG 4 cut(s) 604, 755, 891, 1039
CviQI GTAC 2 cut(s) 463, 1486
DdeI CTNAG 3 cut(s) 370, 811, 1102
DpnI GATC 5 cut(s) 101, 514, 951, 1372, 1377
DpnII GATC 5 cut(s) 99, 512, 949, 1370, 1375
DraIII CACNNNGTG 2 cut(s) 704, 1262
DrdI GACNNNNNNGTC 2 cut(s) 213, 311
DseDI GACNNNNNNGTC 2 cut(s) 213, 311
EaeI YGGCCR 2 cut(s) 535, 706
Eam1104I CTCTTC 3 cut(s) 51, 119, 966
EarI CTCTTC 3 cut(s) 51, 119, 966
EciI GGCGGA 1 cut(s) 1383
Eco130I CCWWGG 1 cut(s) 754
Eco147I AGGCCT 1 cut(s) 114
Eco32I GATATC 1 cut(s) 142
Eco47I GGWCC 5 cut(s) 215, 313, 596, 663, 976
Eco57I CTGAAG 3 cut(s) 378, 692, 990
Eco88I CYCGRG 3 cut(s) 225, 870, 1379
Eco91I GGTNACC 1 cut(s) 840
EcoO109I RGGNCCY 3 cut(s) 313, 596, 976
EcoO65I GGTNACC 1 cut(s) 840
EcoRI GAATTC 1 cut(s) 1276
EcoRII CCWGG 4 cut(s) 655, 679, 1356, 1402
EcoRV GATATC 1 cut(s) 142
EcoT14I CCWWGG 1 cut(s) 754
EcoT22I ATGCAT 2 cut(s) 6, 896
ErhI CCWWGG 1 cut(s) 754
Esp3I CGTCTC 1 cut(s) 1105
FaeI CATG 4 cut(s) 607, 758, 894, 1042
FaqI GGGAC 1 cut(s) 1340
FatI CATG 4 cut(s) 603, 754, 890, 1038
FauNDI CATATG 1 cut(s) 261
Fnu4HI GCNGC 5 cut(s) 196, 387, 390, 580, 1475
FokI GGATG 6 cut(s) 449, 505, 672, 1046, 1178, 1472
Fsp4HI GCNGC 5 cut(s) 196, 387, 390, 580, 1475
FspBI CTAG 5 cut(s) 317, 485, 528, 1143, 1196
GluI GCNGC 5 cut(s) 196, 387, 390, 580, 1475
GsaI CCCAGC 1 cut(s) 436
GsuI CTGGAG 3 cut(s) 744, 1291, 1379
HaeIII GGCC 5 cut(s) 114, 537, 708, 753, 1315
HapII CCGG 1 cut(s) 39
Hin1II CATG 4 cut(s) 607, 758, 894, 1042
HincII GTYRAC 2 cut(s) 79, 348
HindII GTYRAC 2 cut(s) 79, 348
HindIII AAGCTT 2 cut(s) 352, 674
HinfI GANTC 3 cut(s) 775, 1091, 1391
HpaII CCGG 1 cut(s) 39
HphI GGTGA 6 cut(s) 314, 371, 620, 959, 999, 1346
Hpy166II GTNNAC 5 cut(s) 79, 189, 348, 463, 1235
Hpy188I TCNGA 8 cut(s) 31, 110, 343, 411, 457, 1066, 1105, 1375
Hpy188III TCNNGA 7 cut(s) 723, 968, 1039, 1232, 1262, 1325, 1379
Hpy8I GTNNAC 5 cut(s) 79, 189, 348, 463, 1235
Hpy99I CGWCG 2 cut(s) 149, 1353
HpyAV CCTTC 2 cut(s) 619, 702
HpyCH4III ACNGT 3 cut(s) 501, 564, 831
HpyCH4IV ACGT 4 cut(s) 237, 465, 700, 904
HpyCH4V TGCA 9 cut(s) 4, 189, 389, 804, 827, 894, 986, 1001, 1286
HpyF10VI GCNNNNNNNGC 4 cut(s) 195, 395, 695, 930
HpyF3I CTNAG 3 cut(s) 370, 811, 1102
HpySE526I ACGT 4 cut(s) 237, 465, 700, 904
Hsp92II CATG 4 cut(s) 607, 758, 894, 1042
Kzo9I GATC 5 cut(s) 99, 512, 949, 1370, 1375
LmnI GCTCC 1 cut(s) 694
Lsp1109I GCAGC 3 cut(s) 373, 401, 1461
LweI GCATC 1 cut(s) 813
MaeI CTAG 5 cut(s) 317, 485, 528, 1143, 1196
MaeII ACGT 4 cut(s) 237, 465, 700, 904
MaeIII GTNAC 6 cut(s) 65, 302, 359, 840, 1262, 1352
MalI GATC 5 cut(s) 101, 514, 951, 1372, 1377
MboI GATC 5 cut(s) 99, 512, 949, 1370, 1375
MboII GAAGA 7 cut(s) 15, 38, 136, 653, 983, 1100, 1187
MflI RGATCY 1 cut(s) 1370
MhlI GDGCHC 1 cut(s) 191
MlsI TGGCCA 2 cut(s) 537, 708
MluCI AATT 6 cut(s) 414, 504, 1106, 1276, 1341, 1501
MluNI TGGCCA 2 cut(s) 537, 708
MlyI GAGTC 2 cut(s) 784, 1400
MmeI TCCRAC 1 cut(s) 1192
Mox20I TGGCCA 2 cut(s) 537, 708
Mph1103I ATGCAT 2 cut(s) 6, 896
MscI TGGCCA 2 cut(s) 537, 708
MseI TTAA 4 cut(s) 1302, 1443, 1500, 1504
MslI CAYNNNNRTG 4 cut(s) 487, 529, 658, 889
Msp20I TGGCCA 2 cut(s) 537, 708
MspI CCGG 1 cut(s) 39
MspR9I CCNGG 4 cut(s) 657, 681, 1358, 1404
MvaI CCWGG 4 cut(s) 657, 681, 1358, 1404
MwoI GCNNNNNNNGC 4 cut(s) 195, 395, 695, 930
NcoI CCATGG 1 cut(s) 754
NdeI CATATG 1 cut(s) 261
NdeII GATC 5 cut(s) 99, 512, 949, 1370, 1375
NlaIII CATG 4 cut(s) 607, 758, 894, 1042
NlaIV GGNNCC 6 cut(s) 216, 314, 665, 966, 978, 1155
NmuCI GTSAC 5 cut(s) 65, 302, 359, 1262, 1352
NsiI ATGCAT 2 cut(s) 6, 896
NspI RCATGY 1 cut(s) 894
OliI CACNNNNGTG 1 cut(s) 487
PacI TTAATTAA 1 cut(s) 1504
PaeR7I CTCGAG 1 cut(s) 870
PagI TCATGA 1 cut(s) 1038
PceI AGGCCT 1 cut(s) 114
PcsI WCGNNNNNNNCGW 1 cut(s) 144
PfeI GAWTC 1 cut(s) 1091
PfoI TCCNGGA 1 cut(s) 1402
PkrI GCNGC 5 cut(s) 197, 388, 391, 581, 1476
PleI GAGTC 2 cut(s) 783, 1399
PpsI GAGTC 2 cut(s) 783, 1399
PpuMI RGGWCCY 3 cut(s) 313, 596, 976
Psp5II RGGWCCY 3 cut(s) 313, 596, 976
Psp6I CCWGG 4 cut(s) 655, 679, 1356, 1402
PspEI GGTNACC 1 cut(s) 840
PspFI CCCAGC 1 cut(s) 432
PspGI CCWGG 4 cut(s) 655, 679, 1356, 1402
PspN4I GGNNCC 6 cut(s) 216, 314, 665, 966, 978, 1155
PspPI GGNCC 6 cut(s) 215, 313, 596, 663, 976, 1313
PspPPI RGGWCCY 3 cut(s) 313, 596, 976
PspXI VCTCGAGB 1 cut(s) 870
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 1 cut(s) 1370
RsaI GTAC 2 cut(s) 464, 1487
RsaNI GTAC 2 cut(s) 463, 1486
RseI CAYNNNNRTG 4 cut(s) 487, 529, 658, 889
SaqAI TTAA 4 cut(s) 1302, 1443, 1500, 1504
SatI GCNGC 5 cut(s) 196, 387, 390, 580, 1475
Sau3AI GATC 5 cut(s) 99, 512, 949, 1370, 1375
Sau96I GGNCC 6 cut(s) 215, 313, 596, 663, 976, 1313
SchI GAGTC 2 cut(s) 784, 1400
ScrFI CCNGG 4 cut(s) 657, 681, 1358, 1404
SduI GDGCHC 1 cut(s) 191
SfaNI GCATC 1 cut(s) 813
SfcI CTRYAG 1 cut(s) 387
Sfr274I CTCGAG 1 cut(s) 870
SinI GGWCC 5 cut(s) 215, 313, 596, 663, 976
SlaI CTCGAG 1 cut(s) 870
SmiMI CAYNNNNRTG 4 cut(s) 487, 529, 658, 889
SmlI CTYRAG 2 cut(s) 870, 1070
SmoI CTYRAG 2 cut(s) 870, 1070
Sse9I AATT 6 cut(s) 414, 504, 1106, 1276, 1341, 1501
SseBI AGGCCT 1 cut(s) 114
SsiI CCGC 5 cut(s) 195, 579, 696, 838, 1368
SspI AATATT 1 cut(s) 1018
SspMI CTAG 5 cut(s) 317, 485, 528, 1143, 1196
StuI AGGCCT 1 cut(s) 114
StyD4I CCNGG 4 cut(s) 655, 679, 1356, 1402
StyI CCWWGG 1 cut(s) 754
TaaI ACNGT 3 cut(s) 501, 564, 831
TaiI ACGT 4 cut(s) 240, 468, 703, 907
TaqI TCGA 2 cut(s) 16, 871
TasI AATT 6 cut(s) 414, 504, 1106, 1276, 1341, 1501
TatI WGTACW 1 cut(s) 1485
TauI GCSGC 2 cut(s) 198, 582
TfiI GAWTC 1 cut(s) 1091
Tru1I TTAA 4 cut(s) 1302, 1443, 1500, 1504
Tru9I TTAA 4 cut(s) 1302, 1443, 1500, 1504
TscAI CASTG 8 cut(s) 67, 76, 196, 205, 522, 836, 891, 1274
TseFI GTSAC 5 cut(s) 65, 302, 359, 1262, 1352
TseI GCWGC 3 cut(s) 386, 389, 1474
Tsp45I GTSAC 5 cut(s) 65, 302, 359, 1262, 1352
TspDTI ATGAA 4 cut(s) 256, 663, 870, 1282
TspRI CASTG 8 cut(s) 67, 76, 196, 205, 522, 836, 891, 1274
VneI GTGCAC 1 cut(s) 187
VpaK11BI GGWCC 5 cut(s) 215, 313, 596, 663, 976
XapI RAATTY 1 cut(s) 1276
XceI RCATGY 1 cut(s) 894
XcmI CCANNNNNNNNNTGG 2 cut(s) 59, 761
XhoI CTCGAG 1 cut(s) 870
XspI CTAG 5 cut(s) 317, 485, 528, 1143, 1196
Zsp2I ATGCAT 2 cut(s) 6, 896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.