MD17G1056100.v1.1

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000138
Physical Location & Seq
Forward (+)
4433867 .. 4435408
1542 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1056100.v1.1.491

Sequence Viewer

Length: 1542 bp
ATGGCAGTGAAAGTCATTCAAGTTTGCAGGGTAGCTCCACAACCTGGCTCGTCGGCGGCCTCGGCCATCCCAACTCAAGGAGGGAAACAAACTTACGATGGAGATACCGCTGTGTCAGAAGCAATATTCCAAGTCAATCACGCACTGCCGGCTCAAGATTACTCGTCTCTTCCTCTAACCTTCATTGACCTCCTATGGCTAAGGTATCCACCCTTCCATCGCCTTTTCTTCTATAACATATTGCCTTTCTCTTCCCCTGCAGATACCCTACTCTTTTTTCATTCAATAATTATTCCAAAACTCAAAACCTCTCTCTCTCTCACCCTCCAACATTTTCTGCCTCTAGCCGGAAACATCACTTGGCCCGAAAACTCCCCCAAACCCACCCTCAATTATGTCAAGGGCGACACCGTTTCCCTCACAGTAGCCGAATCTGATGCCGATTTCCACCATCTCTCAAGCAATGACTTTAACATTGATGCCAAAGAATACCACCCTCTTGTACCCCAACTGGAGAACTCTCACGAAAAAGCCGCCGTGATGGCGTTCCAAATCACCGTATTTCCCAACAGCGGCGGCTTTTCCATTGGAATATCCATGCACCATGCAGTTGTTGACGGCAAGACTCTCTTCATGTTTCTGAAATCATGGACCCACATATGCAGACATGTTCATCAATCTGATGACGTTGTTTTGCCTGATCAGCTCAAACCATTTTACGACAGAAGGGGTATGAAAGACCCCATCTTTCTCCAACTGGAAGAGATTTACTTGAACCAGTTTCTGAACATGGACAGACAACAAAATAATCGAAGCTTGATGGTTGCAGCCCGCTATAAATCTCTAGTGATATCAAATTCAACTCGAGGCAACTTCGAATTCACGAGCGCAAAGATACAAGCTTTACGGAAATGGATCATGGCCAGGAAACAACAGGAAGGACATGATCGATCTGTTCATTTGTCAACATTTTCTCTAACGTGCGCCTACTCATGGATTTGCTTGCTAAAAGCAGAGCAAGAAGAGCAAGATGAAGTAAAAGGGGACAAAATAATACCTATGGTAATTAACGTGGACTGCCGGTCGCGCTTAACCCCTCCTTTGCCTGCAAACTATTTTGGAAACTGCGTAACGGCCCGTCTAGCACTTGCAGAAAGAAAAGGACTTCTGGGAGAAGACGGGTTGATTGTAGCGGTAAATGCGATTAGTGAAGCCATTAAGGGTTTGGATGACGGGAGTTTGATGAATGGCGCGGAGAATCTCGTTTCCAGTTTGTACCCTTCTGATGAACAGACTAGTAGTGGTGCTGGTCATCGGAGATTTTTTACAACCGCTGGATCGCATCGGTTTGACATGTATGATACTGATTTTGGATGGGGAAGGCCAAGGAGCACCGAAGTGGTTCGGATGCATACAGTCGGGACGATCACTTTTGCAGATGGTAAGAACGGCGGCGGAGCTGTTGACATCGGGTTGGTTTTGAAAAAACATCATATGGAGGCTTTTGCTTCTCTATTTGCAAAAGGTCTTGAAACCCTTTGA

Protein Analysis

514

Amino Acids

57.09

Weight (kDa)

6.57

Isoelectric Point (pI)

40.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 56 - 504 2.4e-53 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 44
AccII CGCG 2 cut(s) 1087, 1253
AclWI GGATC 2 cut(s) 923, 1345
AcoI YGGCCR 2 cut(s) 63, 921
AcsI RAATTY 2 cut(s) 856, 878
AfaI GTAC 2 cut(s) 504, 1277
AfiI CCNNNNNNNGG 5 cut(s) 44, 77, 347, 572, 993
AflIII ACRYGT 2 cut(s) 667, 1353
AgsI TTSAA 6 cut(s) 20, 285, 775, 861, 1483, 1532
AhdI GACNNNNNGTC 1 cut(s) 1081
AhlI ACTAGT 1 cut(s) 1295
AjnI CCWGG 2 cut(s) 43, 923
AjuI GAANNNNNNNTTGG 2 cut(s) 343, 375
AleI CACNNNNGTG 1 cut(s) 1397
AluBI AGCT 5 cut(s) 35, 706, 816, 902, 1460
AluI AGCT 5 cut(s) 35, 706, 816, 902, 1460
Alw21I GWGCWC 1 cut(s) 1394
Alw26I GTCTC 1 cut(s) 171
AlwI GGATC 2 cut(s) 923, 1345
AlwNI CAGNNNCTG 1 cut(s) 784
Ama87I CYCGRG 1 cut(s) 864
AoxI GGCC 6 cut(s) 57, 63, 362, 921, 1134, 1382
ApeKI GCWGC 1 cut(s) 827
ApoI RAATTY 2 cut(s) 856, 878
Asp700I GAANNNNTTC 1 cut(s) 1401
AspLEI GCGC 4 cut(s) 890, 986, 1089, 1253
AspS9I GGNCC 3 cut(s) 363, 651, 1135
AsuHPI GGTGA 2 cut(s) 313, 547
AsuII TTCGAA 1 cut(s) 876
AvaI CYCGRG 1 cut(s) 864
AvaII GGWCC 1 cut(s) 651
BaeI ACNNNNGTAYC 2 cut(s) 96, 129
BalI TGGCCA 1 cut(s) 923
BarI GAAGNNNNNNTAC 2 cut(s) 197, 229
BauI CACGAG 1 cut(s) 883
BbsI GAAGAC 1 cut(s) 1182
Bbv12I GWGCWC 1 cut(s) 1394
BbvI GCAGC 1 cut(s) 839
BccI CCATC 9 cut(s) 74, 92, 225, 459, 535, 752, 814, 1368, 1433
BceAI ACGGC 4 cut(s) 521, 634, 1149, 1465
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 2 cut(s) 45, 925
BciVI GTATCC 1 cut(s) 216
BclI TGATCA 1 cut(s) 700
BcoDI GTCTC 1 cut(s) 171
BcuI ACTAGT 1 cut(s) 1295
BfaI CTAG 4 cut(s) 344, 845, 1142, 1296
BfmI CTRYAG 1 cut(s) 258
BfuI GTATCC 1 cut(s) 216
BglI GCCNNNNNGGC 1 cut(s) 542
BisI GCNGC 6 cut(s) 57, 534, 574, 577, 828, 1453
BlsI GCNGC 6 cut(s) 58, 535, 575, 578, 829, 1454
Bme1390I CCNGG 2 cut(s) 45, 925
Bme18I GGWCC 1 cut(s) 651
BmeRI GACNNNNNGTC 1 cut(s) 1081
BmeT110I CYCGRG 1 cut(s) 864
BmgT120I GGNCC 3 cut(s) 363, 651, 1135
BmiI GGNNCC 1 cut(s) 653
BmrFI CCNGG 2 cut(s) 45, 925
BmsI GCATC 4 cut(s) 427, 469, 1351, 1398
BpiI GAAGAC 1 cut(s) 1182
BpmI CTGGAG 1 cut(s) 533
Bpu10I CCTNAGC 1 cut(s) 200
Bpu14I TTCGAA 1 cut(s) 876
BpuEI CTTGAG 3 cut(s) 60, 138, 442
Bsa29I ATCGAT 1 cut(s) 949
BsaJI CCNNGG 2 cut(s) 60, 1385
Bsc4I CCNNNNNNNGG 5 cut(s) 44, 77, 347, 572, 993
Bse118I RCCGGY 2 cut(s) 148, 1080
Bse1I ACTGG 4 cut(s) 516, 762, 778, 1269
Bse3DI GCAATG 1 cut(s) 469
BseBI CCWGG 2 cut(s) 45, 925
BseCI ATCGAT 1 cut(s) 949
BseDI CCNNGG 2 cut(s) 60, 1385
BseGI GGATG 4 cut(s) 66, 1234, 1379, 1413
BseLI CCNNNNNNNGG 5 cut(s) 44, 77, 347, 572, 993
BseMI GCAATG 1 cut(s) 469
BseNI ACTGG 4 cut(s) 516, 762, 778, 1269
BseXI GCAGC 1 cut(s) 839
Bsh1236I CGCG 2 cut(s) 1087, 1253
Bsh1285I CGRYCG 1 cut(s) 1085
BshFI GGCC 6 cut(s) 59, 65, 364, 923, 1136, 1384
BshVI ATCGAT 1 cut(s) 949
BsiEI CGRYCG 1 cut(s) 1085
BsiHKAI GWGCWC 1 cut(s) 1394
BsiHKCI CYCGRG 1 cut(s) 864
BsiSI CCGG 3 cut(s) 149, 348, 1081
BslFI GGGAC 2 cut(s) 1058, 1435
BslI CCNNNNNNNGG 5 cut(s) 44, 77, 347, 572, 993
BsmAI GTCTC 1 cut(s) 171
BsmBI CGTCTC 1 cut(s) 171
BsmFI GGGAC 2 cut(s) 1058, 1435
BsnI GGCC 6 cut(s) 59, 65, 364, 923, 1136, 1384
BsoBI CYCGRG 1 cut(s) 864
Bsp119I TTCGAA 1 cut(s) 876
Bsp1286I GDGCHC 1 cut(s) 1394
Bsp143I GATC 6 cut(s) 700, 915, 946, 950, 1337, 1425
BspANI GGCC 6 cut(s) 59, 65, 364, 923, 1136, 1384
BspDI ATCGAT 1 cut(s) 949
BspFNI CGCG 2 cut(s) 1087, 1253
BspLI GGNNCC 1 cut(s) 653
BspMAI CTGCAG 1 cut(s) 262
BspPI GGATC 2 cut(s) 923, 1345
BspQI GCTCTTC 1 cut(s) 1017
BspT104I TTCGAA 1 cut(s) 876
BsrDI GCAATG 1 cut(s) 469
BsrFI RCCGGY 2 cut(s) 148, 1080
BsrI ACTGG 4 cut(s) 516, 762, 778, 1269
BssAI RCCGGY 2 cut(s) 148, 1080
BssECI CCNNGG 2 cut(s) 60, 1385
BssMI GATC 6 cut(s) 700, 915, 946, 950, 1337, 1425
BssSI CACGAG 1 cut(s) 883
BssT1I CCWWGG 1 cut(s) 1385
Bst2BI CACGAG 1 cut(s) 883
Bst2UI CCWGG 2 cut(s) 45, 925
Bst4CI ACNGT 4 cut(s) 412, 424, 559, 1417
Bst6I CTCTTC 5 cut(s) 174, 256, 635, 756, 1017
BstBI TTCGAA 1 cut(s) 876
BstC8I GCNNGC 4 cut(s) 150, 832, 1004, 1107
BstDEI CTNAG 1 cut(s) 200
BstF5I GGATG 4 cut(s) 66, 1234, 1379, 1413
BstFNI CGCG 2 cut(s) 1087, 1253
BstHHI GCGC 4 cut(s) 890, 986, 1089, 1253
BstKTI GATC 6 cut(s) 703, 918, 949, 953, 1340, 1428
BstMAI GTCTC 1 cut(s) 171
BstMBI GATC 6 cut(s) 700, 915, 946, 950, 1337, 1425
BstMCI CGRYCG 1 cut(s) 1085
BstMWI GCNNNNNNNGC 8 cut(s) 62, 149, 542, 703, 1024, 1086, 1142, 1199
BstNI CCWGG 2 cut(s) 45, 925
BstNSI RCATGY 2 cut(s) 671, 1357
BstSCI CCNGG 2 cut(s) 43, 923
BstSFI CTRYAG 1 cut(s) 258
BstUI CGCG 2 cut(s) 1087, 1253
BstV1I GCAGC 1 cut(s) 839
BstV2I GAAGAC 1 cut(s) 1182
Bsu15I ATCGAT 1 cut(s) 949
BsuI GTATCC 1 cut(s) 216
BsuRI GGCC 6 cut(s) 59, 65, 364, 923, 1136, 1384
BsuTUI ATCGAT 1 cut(s) 949
BtgZI GCGATG 1 cut(s) 203
BtsCI GGATG 4 cut(s) 66, 1234, 1379, 1413
BtsI GCAGTG 2 cut(s) 12, 143
BtsIMutI CAGTG 2 cut(s) 12, 143
Cac8I GCNNGC 4 cut(s) 150, 832, 1004, 1107
CaiI CAGNNNCTG 1 cut(s) 784
CfoI GCGC 4 cut(s) 890, 986, 1089, 1253
Cfr10I RCCGGY 2 cut(s) 148, 1080
Cfr13I GGNCC 3 cut(s) 363, 651, 1135
ClaI ATCGAT 1 cut(s) 949
Csp6I GTAC 2 cut(s) 503, 1276
CviQI GTAC 2 cut(s) 503, 1276
DdeI CTNAG 1 cut(s) 200
DpnI GATC 6 cut(s) 702, 917, 948, 952, 1339, 1427
DpnII GATC 6 cut(s) 700, 915, 946, 950, 1337, 1425
DriI GACNNNNNGTC 1 cut(s) 1081
EaeI YGGCCR 2 cut(s) 63, 921
Eam1104I CTCTTC 5 cut(s) 174, 256, 635, 756, 1017
Eam1105I GACNNNNNGTC 1 cut(s) 1081
EarI CTCTTC 5 cut(s) 174, 256, 635, 756, 1017
EciI GGCGGA 1 cut(s) 1470
Eco130I CCWWGG 1 cut(s) 1385
Eco32I GATATC 1 cut(s) 852
Eco47I GGWCC 1 cut(s) 651
Eco88I CYCGRG 1 cut(s) 864
EcoRI GAATTC 1 cut(s) 878
EcoRII CCWGG 2 cut(s) 43, 923
EcoRV GATATC 1 cut(s) 852
EcoT14I CCWWGG 1 cut(s) 1385
EcoT22I ATGCAT 1 cut(s) 1413
ErhI CCWWGG 1 cut(s) 1385
Esp3I CGTCTC 1 cut(s) 171
FalI AAGNNNNNCTT 2 cut(s) 614, 646
FaqI GGGAC 2 cut(s) 1058, 1435
FauI CCCGC 1 cut(s) 839
FauNDI CATATG 2 cut(s) 659, 1494
FbaI TGATCA 1 cut(s) 700
Fnu4HI GCNGC 6 cut(s) 57, 534, 574, 577, 828, 1453
FokI GGATG 4 cut(s) 53, 1241, 1386, 1420
Fsp4HI GCNGC 6 cut(s) 57, 534, 574, 577, 828, 1453
FspBI CTAG 4 cut(s) 344, 845, 1142, 1296
GlaI GCGC 4 cut(s) 889, 985, 1088, 1252
GluI GCNGC 6 cut(s) 57, 534, 574, 577, 828, 1453
GsuI CTGGAG 1 cut(s) 533
HaeIII GGCC 6 cut(s) 59, 65, 364, 923, 1136, 1384
HapII CCGG 3 cut(s) 149, 348, 1081
HhaI GCGC 4 cut(s) 890, 986, 1089, 1253
Hin6I GCGC 4 cut(s) 888, 984, 1087, 1251
HinP1I GCGC 4 cut(s) 888, 984, 1087, 1251
HincII GTYRAC 3 cut(s) 616, 966, 1465
HindII GTYRAC 3 cut(s) 616, 966, 1465
HindIII AAGCTT 2 cut(s) 814, 900
HinfI GANTC 3 cut(s) 431, 625, 1258
HpaII CCGG 3 cut(s) 149, 348, 1081
HphI GGTGA 2 cut(s) 313, 547
Hpy166II GTNNAC 4 cut(s) 616, 966, 1075, 1465
Hpy188I TCNGA 8 cut(s) 118, 436, 642, 682, 786, 1285, 1317, 1407
Hpy188III TCNNGA 5 cut(s) 155, 524, 883, 1420, 1529
Hpy8I GTNNAC 4 cut(s) 616, 966, 1075, 1465
Hpy99I CGWCG 1 cut(s) 55
HpyAV CCTTC 6 cut(s) 190, 223, 720, 932, 1290, 1374
HpyCH4III ACNGT 4 cut(s) 412, 424, 559, 1417
HpyCH4IV ACGT 3 cut(s) 687, 980, 1071
HpyF10VI GCNNNNNNNGC 8 cut(s) 62, 149, 542, 703, 1024, 1086, 1142, 1199
HpyF3I CTNAG 1 cut(s) 200
HpySE526I ACGT 3 cut(s) 687, 980, 1071
HspAI GCGC 4 cut(s) 888, 984, 1087, 1251
KroI GCCGGC 1 cut(s) 148
KroNI GCCGGC 1 cut(s) 150
Ksp22I TGATCA 1 cut(s) 700
Kzo9I GATC 6 cut(s) 700, 915, 946, 950, 1337, 1425
LguI GCTCTTC 1 cut(s) 1017
LmnI GCTCC 3 cut(s) 40, 1389, 1457
Lsp1109I GCAGC 1 cut(s) 839
LweI GCATC 4 cut(s) 427, 469, 1351, 1398
MaeI CTAG 4 cut(s) 344, 845, 1142, 1296
MaeII ACGT 3 cut(s) 687, 980, 1071
MaeIII GTNAC 1 cut(s) 1129
MalI GATC 6 cut(s) 702, 917, 948, 952, 1339, 1427
MboI GATC 6 cut(s) 700, 915, 946, 950, 1337, 1425
MboII GAAGA 7 cut(s) 161, 220, 243, 622, 773, 1034, 1187
MhlI GDGCHC 1 cut(s) 1394
MlsI TGGCCA 1 cut(s) 923
MluCI AATT 5 cut(s) 288, 391, 856, 878, 1065
MluNI TGGCCA 1 cut(s) 923
MlyI GAGTC 1 cut(s) 619
MmeI TCCRAC 2 cut(s) 352, 778
Mox20I TGGCCA 1 cut(s) 923
Mph1103I ATGCAT 1 cut(s) 1413
MroNI GCCGGC 1 cut(s) 148
MroXI GAANNNNTTC 1 cut(s) 1401
MscI TGGCCA 1 cut(s) 923
MseI TTAA 4 cut(s) 471, 1068, 1091, 1218
MslI CAYNNNNRTG 1 cut(s) 1397
Msp20I TGGCCA 1 cut(s) 923
MspA1I CMGCKG 3 cut(s) 110, 573, 1334
MspI CCGG 3 cut(s) 149, 348, 1081
MspR9I CCNGG 2 cut(s) 45, 925
MvaI CCWGG 2 cut(s) 45, 925
MvnI CGCG 2 cut(s) 1087, 1253
MwoI GCNNNNNNNGC 8 cut(s) 62, 149, 542, 703, 1024, 1086, 1142, 1199
NaeI GCCGGC 1 cut(s) 150
NdeI CATATG 2 cut(s) 659, 1494
NdeII GATC 6 cut(s) 700, 915, 946, 950, 1337, 1425
NgoMIV GCCGGC 1 cut(s) 148
NlaIV GGNNCC 1 cut(s) 653
NmeAIII GCCGAG 1 cut(s) 41
NsiI ATGCAT 1 cut(s) 1413
NspI RCATGY 2 cut(s) 671, 1357
NspV TTCGAA 1 cut(s) 876
OliI CACNNNNGTG 1 cut(s) 1397
PaeR7I CTCGAG 1 cut(s) 864
PciI ACATGT 2 cut(s) 667, 1353
PciSI GCTCTTC 1 cut(s) 1017
PdiI GCCGGC 1 cut(s) 150
PdmI GAANNNNTTC 1 cut(s) 1401
PfeI GAWTC 2 cut(s) 431, 1258
PflMI CCANNNNNTGG 1 cut(s) 44
PkrI GCNGC 6 cut(s) 58, 535, 575, 578, 829, 1454
PleI GAGTC 1 cut(s) 619
PpsI GAGTC 1 cut(s) 619
PscI ACATGT 2 cut(s) 667, 1353
Psp6I CCWGG 2 cut(s) 43, 923
PspGI CCWGG 2 cut(s) 43, 923
PspN4I GGNNCC 1 cut(s) 653
PspPI GGNCC 3 cut(s) 363, 651, 1135
PspXI VCTCGAGB 1 cut(s) 864
PstI CTGCAG 1 cut(s) 262
PstNI CAGNNNCTG 1 cut(s) 784
RsaI GTAC 2 cut(s) 504, 1277
RsaNI GTAC 2 cut(s) 503, 1276
RseI CAYNNNNRTG 1 cut(s) 1397
SapI GCTCTTC 1 cut(s) 1017
SaqAI TTAA 4 cut(s) 471, 1068, 1091, 1218
SatI GCNGC 6 cut(s) 57, 534, 574, 577, 828, 1453
Sau3AI GATC 6 cut(s) 700, 915, 946, 950, 1337, 1425
Sau96I GGNCC 3 cut(s) 363, 651, 1135
SchI GAGTC 1 cut(s) 619
ScrFI CCNGG 2 cut(s) 45, 925
SduI GDGCHC 1 cut(s) 1394
SfaNI GCATC 4 cut(s) 427, 469, 1351, 1398
SfcI CTRYAG 1 cut(s) 258
Sfr274I CTCGAG 1 cut(s) 864
SfuI TTCGAA 1 cut(s) 876
SinI GGWCC 1 cut(s) 651
SlaI CTCGAG 1 cut(s) 864
SmiMI CAYNNNNRTG 1 cut(s) 1397
SmlI CTYRAG 4 cut(s) 75, 153, 457, 864
SmoI CTYRAG 4 cut(s) 75, 153, 457, 864
SpeI ACTAGT 1 cut(s) 1295
Sse9I AATT 5 cut(s) 288, 391, 856, 878, 1065
SspI AATATT 1 cut(s) 126
SspMI CTAG 4 cut(s) 344, 845, 1142, 1296
StyD4I CCNGG 2 cut(s) 43, 923
StyI CCWWGG 1 cut(s) 1385
TaaI ACNGT 4 cut(s) 412, 424, 559, 1417
TaiI ACGT 3 cut(s) 690, 983, 1074
TaqI TCGA 4 cut(s) 811, 865, 876, 949
TasI AATT 5 cut(s) 288, 391, 856, 878, 1065
TauI GCSGC 5 cut(s) 59, 536, 576, 579, 1455
TfiI GAWTC 2 cut(s) 431, 1258
Tru1I TTAA 4 cut(s) 471, 1068, 1091, 1218
Tru9I TTAA 4 cut(s) 471, 1068, 1091, 1218
TscAI CASTG 2 cut(s) 12, 150
TseI GCWGC 1 cut(s) 827
TspDTI ATGAA 9 cut(s) 172, 269, 622, 662, 749, 947, 1047, 1259, 1302
TspGWI ACGGA 1 cut(s) 922
TspRI CASTG 2 cut(s) 12, 150
Van91I CCANNNNNTGG 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 651
XapI RAATTY 2 cut(s) 856, 878
XceI RCATGY 2 cut(s) 671, 1357
XcmI CCANNNNNNNNNTGG 1 cut(s) 1222
XhoI CTCGAG 1 cut(s) 864
XmnI GAANNNNTTC 1 cut(s) 1401
XspI CTAG 4 cut(s) 344, 845, 1142, 1296
Zsp2I ATGCAT 1 cut(s) 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.