MD09G1080400.v1.1

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000138
Physical Location & Seq
Reverse (-)
5637533 .. 5638957
1425 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1080400.v1.1.491

Sequence Viewer

Length: 1425 bp
ATGGCAAAACCAGGCTCAGTCAAAGTTATTGAGGCTCGTAGAGTAGCTCCCAAACCAAGCTCGCTGCCGGACTCCGCCCACCCGGATGATGTGTCTCTTCCTCTAACATTCTTTGACCTCCGCTGGCTAAGGTTCCCACCGCCTCAATTCCTTTCCTTCTACAACTTGCCTTCTTTCGACCCATCACACTTCTTCGATTCCATACTTCCGAAACTTAAAACCTCGCTTTCTGCCACCCTCCAACACTTTGTACCTCTAGCAGGAAACCTCACCTGGCCTCTAGACTCCCCCATGCCCCTTCTCAATTATGTCAAAGGCGACGCAATTTTGGTCACAATCGCCGAGTCTGATACTGATTTCCACCGTCTAATTTCAACCAACAACTTTGACATTGAAGCCAAAGAATACCATCCTCTTGTACCCCAATTGGCAGTGTCTCATGACAAAGCTGCTGTGCTGGCATTGCAAATAACCGTCTTTCCCAATGGCGGTTTTTCGATTGGATCAGCCATGCACAAGGCCGTCTTTGATGGCTTATCTGCTTTCTCGTTTTTCAAATTTTGGGGTCACTTATGCAAACATGGAGGAAGAGAAGGAGGAGGACCGCCACCCTTGCCAACTTACAACAGAAAGGTCATTAAGGACCCTGCCGGGCTCCAAGCAATCTTCTCAAACGAGTGGTTAAGACTTGGTGGTCCAAACAATAGAAGCTTAATGCTTTTGGAGGTTGGAGGTCCAGGAGACGGAATTCGAGGCACCTTCGAGTTCACACGAGCGAAAATCGAAATGTTAAGGCGGTCAGTGATGAGGACTATGATGGCAAAGAAGAAGGAACAAGCTGATCACTCAAAACTATTGCATTTGTCGACATATATGCTAACATGCGCCTATACATGGGTTTGCTTAGTCAGGGCTGAAGAGATCAAGACAGAGAAAGTAGTATTCATCCTTCACGTGGACTGCCGGTCGCGCTTAGACCCTCCTCTACCACCAACCTATTTCGGGAATTGCATCGCAGGACATGGAGTAGTTGCGAAAACAAAAGACCTACAGGGAGAAGATGGACTGTTAGTGGCCTTGAATGCAATTAGTGAAGTTATAAAAAGTTTGGACAAGACCCTTTTCGAGGGTGCAGAGACTTGGGTCTCAAGAATCTTGAATACACTACTGCAGCCTAGTACTGATAGAACAATTACCACCGCCGGTTCACCCCGGTTTGATTTTTACGATGCGGCGGATTTCGGATGGGGGAGACCGACGAAGCACGAGATAGTTTCGATAGATGGAACAGGGGCGATATCTTATCAAAAGAGCAAGAATGGCGATGGTGCAGTTGAGGTTGGGTTGGTTTTGGAAAAACGTTACATGGAGGCTTTTGCTTATCTATTTGCTGAAGGTCTTGAAGAAAAGTTAAGCCGTATGTAG

Protein Analysis

475

Amino Acids

52.51

Weight (kDa)

7.7

Isoelectric Point (pI)

44.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 23 - 460 9.2e-44 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1100
AasI GACNNNNNNGTC 1 cut(s) 693
AccB1I GGYRCC 1 cut(s) 755
AccI GTMKAC 1 cut(s) 866
AccII CGCG 1 cut(s) 970
AciI CCGC 9 cut(s) 75, 121, 140, 489, 605, 796, 1200, 1232, 1235
AclI AACGTT 1 cut(s) 1360
AclWI GGATC 1 cut(s) 511
AcsI RAATTY 2 cut(s) 557, 747
AcuI CTGAAG 2 cut(s) 936, 1413
AcvI CACGTG 1 cut(s) 955
AfaI GTAC 3 cut(s) 252, 420, 1180
AfiI CCNNNNNNNGG 7 cut(s) 260, 488, 743, 894, 955, 1002, 1126
AgsI TTSAA 6 cut(s) 375, 395, 556, 1081, 1159, 1403
AhdI GACNNNNNGTC 1 cut(s) 964
AjnI CCWGG 3 cut(s) 10, 272, 736
AluBI AGCT 5 cut(s) 47, 60, 449, 711, 839
AluI AGCT 5 cut(s) 47, 60, 449, 711, 839
Alw26I GTCTC 6 cut(s) 99, 441, 735, 1130, 1150, 1246
AlwI GGATC 1 cut(s) 511
AoxI GGCC 3 cut(s) 275, 519, 1074
ApeKI GCWGC 3 cut(s) 64, 449, 1171
ApoI RAATTY 2 cut(s) 557, 747
AspLEI GCGC 2 cut(s) 887, 972
AspS9I GGNCC 4 cut(s) 602, 643, 695, 734
AsuC2I CCSGG 3 cut(s) 83, 652, 1213
AsuHPI GGTGA 2 cut(s) 262, 1200
AvaII GGWCC 4 cut(s) 602, 643, 695, 734
BanI GGYRCC 1 cut(s) 755
BanII GRGCYC 1 cut(s) 657
BarI GAAGNNNNNNTAC 2 cut(s) 933, 965
BauI CACGAG 2 cut(s) 771, 1265
BbrPI CACGTG 1 cut(s) 955
BbvI GCAGC 3 cut(s) 51, 436, 1183
BccI CCATC 8 cut(s) 190, 417, 524, 811, 1055, 1239, 1277, 1319
BceAI ACGGC 2 cut(s) 506, 1401
BcgI CGANNNNNNTGC 2 cut(s) 856, 890
BciT130I CCWGG 3 cut(s) 12, 274, 738
BclI TGATCA 1 cut(s) 841
BcnI CCSGG 3 cut(s) 83, 652, 1213
BcoDI GTCTC 6 cut(s) 99, 441, 735, 1130, 1150, 1246
BfaI CTAG 3 cut(s) 257, 281, 1176
BfmI CTRYAG 2 cut(s) 1049, 1169
BisI GCNGC 4 cut(s) 65, 450, 1172, 1233
BlsI GCNGC 4 cut(s) 66, 451, 1173, 1234
BmcAI AGTACT 1 cut(s) 1180
Bme1390I CCNGG 6 cut(s) 12, 83, 274, 652, 738, 1213
Bme18I GGWCC 4 cut(s) 602, 643, 695, 734
BmeRI GACNNNNNGTC 1 cut(s) 964
BmgT120I GGNCC 4 cut(s) 602, 643, 695, 734
BmiI GGNNCC 4 cut(s) 134, 645, 656, 757
BmrFI CCNGG 6 cut(s) 12, 83, 274, 652, 738, 1213
BmsI GCATC 2 cut(s) 1020, 1219
BoxI GACNNNNGTC 1 cut(s) 1142
Bpu10I CCTNAGC 1 cut(s) 128
BpuEI CTTGAG 1 cut(s) 1132
BpuMI CCSGG 3 cut(s) 83, 652, 1213
BsaAI YACGTR 1 cut(s) 955
BsaI GGTCTC 2 cut(s) 1150, 1246
BsaJI CCNNGG 1 cut(s) 1211
Bsc4I CCNNNNNNNGG 7 cut(s) 260, 488, 743, 894, 955, 1002, 1126
Bse118I RCCGGY 2 cut(s) 963, 1202
Bse3DI GCAATG 1 cut(s) 461
BseBI CCWGG 3 cut(s) 12, 274, 738
BseDI CCNNGG 1 cut(s) 1211
BseGI GGATG 4 cut(s) 91, 409, 945, 1250
BseLI CCNNNNNNNGG 7 cut(s) 260, 488, 743, 894, 955, 1002, 1126
BseMI GCAATG 1 cut(s) 461
BseMII CTCAG 1 cut(s) 30
BseRI GAGGAG 2 cut(s) 612, 972
BseXI GCAGC 3 cut(s) 51, 436, 1183
BsgI GTGCAG 2 cut(s) 1152, 1350
Bsh1236I CGCG 1 cut(s) 970
Bsh1285I CGRYCG 1 cut(s) 968
BshFI GGCC 3 cut(s) 277, 521, 1076
BshNI GGYRCC 1 cut(s) 755
BsiEI CGRYCG 1 cut(s) 968
BsiSI CCGG 6 cut(s) 68, 83, 651, 964, 1203, 1213
BslI CCNNNNNNNGG 7 cut(s) 260, 488, 743, 894, 955, 1002, 1126
BsmAI GTCTC 6 cut(s) 99, 441, 735, 1130, 1150, 1246
BsmBI CGTCTC 1 cut(s) 735
BsmI GAATGC 1 cut(s) 1087
BsnI GGCC 3 cut(s) 277, 521, 1076
Bso31I GGTCTC 2 cut(s) 1150, 1246
Bsp1286I GDGCHC 1 cut(s) 657
Bsp143I GATC 3 cut(s) 503, 841, 921
BspACI CCGC 9 cut(s) 75, 121, 140, 489, 605, 796, 1200, 1232, 1235
BspANI GGCC 3 cut(s) 277, 521, 1076
BspCNI CTCAG 1 cut(s) 29
BspFNI CGCG 1 cut(s) 970
BspHI TCATGA 1 cut(s) 439
BspLI GGNNCC 4 cut(s) 134, 645, 656, 757
BspMAI CTGCAG 1 cut(s) 1173
BspPI GGATC 1 cut(s) 511
BspT107I GGYRCC 1 cut(s) 755
BspTNI GGTCTC 2 cut(s) 1150, 1246
BsrDI GCAATG 1 cut(s) 461
BsrFI RCCGGY 2 cut(s) 963, 1202
BssAI RCCGGY 2 cut(s) 963, 1202
BssECI CCNNGG 1 cut(s) 1211
BssMI GATC 3 cut(s) 503, 841, 921
BssSI CACGAG 2 cut(s) 771, 1265
Bst2BI CACGAG 2 cut(s) 771, 1265
Bst2UI CCWGG 3 cut(s) 12, 274, 738
Bst4CI ACNGT 3 cut(s) 365, 475, 1068
Bst6I CTCTTC 3 cut(s) 102, 583, 912
BstBAI YACGTR 1 cut(s) 955
BstC8I GCNNGC 3 cut(s) 62, 125, 459
BstDEI CTNAG 4 cut(s) 16, 128, 904, 973
BstENI CCTNNNNNAGG 2 cut(s) 258, 1124
BstF5I GGATG 4 cut(s) 91, 409, 945, 1250
BstFNI CGCG 1 cut(s) 970
BstHHI GCGC 2 cut(s) 887, 972
BstKTI GATC 3 cut(s) 506, 844, 924
BstMAI GTCTC 6 cut(s) 99, 441, 735, 1130, 1150, 1246
BstMBI GATC 3 cut(s) 503, 841, 921
BstMCI CGRYCG 1 cut(s) 968
BstMWI GCNNNNNNNGC 6 cut(s) 458, 463, 613, 969, 1082, 1320
BstNI CCWGG 3 cut(s) 12, 274, 738
BstNSI RCATGY 1 cut(s) 885
BstPAI GACNNNNGTC 1 cut(s) 1142
BstSCI CCNGG 6 cut(s) 10, 81, 272, 650, 736, 1211
BstSFI CTRYAG 2 cut(s) 1049, 1169
BstUI CGCG 1 cut(s) 970
BstV1I GCAGC 3 cut(s) 51, 436, 1183
BsuRI GGCC 3 cut(s) 277, 521, 1076
BtgZI GCGATG 2 cut(s) 997, 1338
BtsCI GGATG 4 cut(s) 91, 409, 945, 1250
BtsI GCAGTG 1 cut(s) 438
BtsIMutI CAGTG 2 cut(s) 438, 807
Cac8I GCNNGC 3 cut(s) 62, 125, 459
CciI TCATGA 1 cut(s) 439
CfoI GCGC 2 cut(s) 887, 972
Cfr10I RCCGGY 2 cut(s) 963, 1202
Cfr13I GGNCC 4 cut(s) 602, 643, 695, 734
CseI GACGC 1 cut(s) 329
Csp6I GTAC 3 cut(s) 251, 419, 1179
CviAII CATG 8 cut(s) 292, 440, 511, 581, 882, 894, 1022, 1366
CviQI GTAC 3 cut(s) 251, 419, 1179
DdeI CTNAG 4 cut(s) 16, 128, 904, 973
DpnI GATC 3 cut(s) 505, 843, 923
DpnII GATC 3 cut(s) 503, 841, 921
DrdI GACNNNNNNGTC 1 cut(s) 693
DriI GACNNNNNGTC 1 cut(s) 964
DseDI GACNNNNNNGTC 1 cut(s) 693
Eam1104I CTCTTC 3 cut(s) 102, 583, 912
Eam1105I GACNNNNNGTC 1 cut(s) 964
EarI CTCTTC 3 cut(s) 102, 583, 912
EciI GGCGGA 2 cut(s) 64, 1250
Eco24I GRGCYC 1 cut(s) 657
Eco31I GGTCTC 2 cut(s) 1150, 1246
Eco32I GATATC 1 cut(s) 1299
Eco47I GGWCC 4 cut(s) 602, 643, 695, 734
Eco57I CTGAAG 2 cut(s) 936, 1413
Eco72I CACGTG 1 cut(s) 955
EcoNI CCTNNNNNAGG 2 cut(s) 258, 1124
EcoO109I RGGNCCY 1 cut(s) 643
EcoRI GAATTC 1 cut(s) 747
EcoRII CCWGG 3 cut(s) 10, 272, 736
EcoRV GATATC 1 cut(s) 1299
EcoT38I GRGCYC 1 cut(s) 657
Esp3I CGTCTC 1 cut(s) 735
FaeI CATG 8 cut(s) 295, 443, 514, 584, 885, 897, 1025, 1369
FalI AAGNNNNNCTT 2 cut(s) 509, 541
FatI CATG 8 cut(s) 291, 439, 510, 580, 881, 893, 1021, 1365
FbaI TGATCA 1 cut(s) 841
FblI GTMKAC 1 cut(s) 866
Fnu4HI GCNGC 4 cut(s) 65, 450, 1172, 1233
FokI GGATG 4 cut(s) 98, 396, 932, 1257
FriOI GRGCYC 1 cut(s) 657
Fsp4HI GCNGC 4 cut(s) 65, 450, 1172, 1233
FspBI CTAG 3 cut(s) 257, 281, 1176
GlaI GCGC 2 cut(s) 886, 971
GluI GCNGC 4 cut(s) 65, 450, 1172, 1233
HaeIII GGCC 3 cut(s) 277, 521, 1076
HapII CCGG 6 cut(s) 68, 83, 651, 964, 1203, 1213
HgaI GACGC 1 cut(s) 329
HhaI GCGC 2 cut(s) 887, 972
Hin1II CATG 8 cut(s) 295, 443, 514, 584, 885, 897, 1025, 1369
Hin6I GCGC 2 cut(s) 885, 970
HinP1I GCGC 2 cut(s) 885, 970
HincII GTYRAC 1 cut(s) 867
HindII GTYRAC 1 cut(s) 867
HindIII AAGCTT 1 cut(s) 709
HinfI GANTC 5 cut(s) 71, 197, 284, 344, 1152
HpaII CCGG 6 cut(s) 68, 83, 651, 964, 1203, 1213
HphI GGTGA 2 cut(s) 262, 1200
Hpy166II GTNNAC 4 cut(s) 768, 867, 958, 1208
Hpy188I TCNGA 3 cut(s) 210, 349, 1244
Hpy188III TCNNGA 7 cut(s) 281, 440, 925, 1003, 1149, 1156, 1400
Hpy8I GTNNAC 4 cut(s) 768, 867, 958, 1208
Hpy99I CGWCG 2 cut(s) 323, 1261
HpyAV CCTTC 8 cut(s) 166, 180, 308, 587, 769, 823, 959, 1388
HpyCH4III ACNGT 3 cut(s) 365, 475, 1068
HpyCH4IV ACGT 2 cut(s) 954, 1360
HpyCH4V TGCA 9 cut(s) 466, 514, 576, 859, 1011, 1085, 1133, 1171, 1331
HpyF10VI GCNNNNNNNGC 6 cut(s) 458, 463, 613, 969, 1082, 1320
HpyF3I CTNAG 4 cut(s) 16, 128, 904, 973
HpySE526I ACGT 2 cut(s) 954, 1360
Hsp92II CATG 8 cut(s) 295, 443, 514, 584, 885, 897, 1025, 1369
HspAI GCGC 2 cut(s) 885, 970
Ksp22I TGATCA 1 cut(s) 841
Kzo9I GATC 3 cut(s) 503, 841, 921
LmnI GCTCC 2 cut(s) 52, 660
Lsp1109I GCAGC 3 cut(s) 51, 436, 1183
LweI GCATC 2 cut(s) 1020, 1219
MaeI CTAG 3 cut(s) 257, 281, 1176
MaeII ACGT 2 cut(s) 954, 1360
MaeIII GTNAC 3 cut(s) 331, 566, 1361
MalI GATC 3 cut(s) 505, 843, 923
MboI GATC 3 cut(s) 503, 841, 921
MboII GAAGA 8 cut(s) 89, 184, 600, 658, 838, 929, 1070, 1415
MfeI CAATTG 1 cut(s) 425
MhlI GDGCHC 1 cut(s) 657
MlyI GAGTC 3 cut(s) 65, 278, 353
MmeI TCCRAC 2 cut(s) 265, 709
MseI TTAA 6 cut(s) 216, 639, 683, 713, 791, 1412
MslI CAYNNNNRTG 1 cut(s) 84
MspA1I CMGCKG 1 cut(s) 123
MspI CCGG 6 cut(s) 68, 83, 651, 964, 1203, 1213
MspR9I CCNGG 6 cut(s) 12, 83, 274, 652, 738, 1213
MunI CAATTG 1 cut(s) 425
Mva1269I GAATGC 1 cut(s) 1087
MvaI CCWGG 3 cut(s) 12, 274, 738
MvnI CGCG 1 cut(s) 970
MwoI GCNNNNNNNGC 6 cut(s) 458, 463, 613, 969, 1082, 1320
NciI CCSGG 3 cut(s) 83, 652, 1213
NdeII GATC 3 cut(s) 503, 841, 921
NlaIII CATG 8 cut(s) 295, 443, 514, 584, 885, 897, 1025, 1369
NlaIV GGNNCC 4 cut(s) 134, 645, 656, 757
NmeAIII GCCGAG 1 cut(s) 367
NmuCI GTSAC 2 cut(s) 331, 566
NspI RCATGY 1 cut(s) 885
PagI TCATGA 1 cut(s) 439
PctI GAATGC 1 cut(s) 1087
PfeI GAWTC 2 cut(s) 197, 1152
PfoI TCCNGGA 1 cut(s) 736
PkrI GCNGC 4 cut(s) 66, 451, 1173, 1234
PleI GAGTC 3 cut(s) 65, 278, 352
PmaCI CACGTG 1 cut(s) 955
PmlI CACGTG 1 cut(s) 955
PpsI GAGTC 3 cut(s) 65, 278, 352
Ppu21I YACGTR 1 cut(s) 955
PpuMI RGGWCCY 1 cut(s) 643
PshAI GACNNNNGTC 1 cut(s) 1142
PsiI TTATAA 1 cut(s) 1100
Psp1406I AACGTT 1 cut(s) 1360
Psp5II RGGWCCY 1 cut(s) 643
Psp6I CCWGG 3 cut(s) 10, 272, 736
PspCI CACGTG 1 cut(s) 955
PspGI CCWGG 3 cut(s) 10, 272, 736
PspN4I GGNNCC 4 cut(s) 134, 645, 656, 757
PspPI GGNCC 4 cut(s) 602, 643, 695, 734
PspPPI RGGWCCY 1 cut(s) 643
PstI CTGCAG 1 cut(s) 1173
RsaI GTAC 3 cut(s) 252, 420, 1180
RsaNI GTAC 3 cut(s) 251, 419, 1179
RseI CAYNNNNRTG 1 cut(s) 84
SalI GTCGAC 1 cut(s) 865
SaqAI TTAA 6 cut(s) 216, 639, 683, 713, 791, 1412
SatI GCNGC 4 cut(s) 65, 450, 1172, 1233
Sau3AI GATC 3 cut(s) 503, 841, 921
Sau96I GGNCC 4 cut(s) 602, 643, 695, 734
ScaI AGTACT 1 cut(s) 1180
SchI GAGTC 3 cut(s) 65, 278, 353
ScrFI CCNGG 6 cut(s) 12, 83, 274, 652, 738, 1213
SduI GDGCHC 1 cut(s) 657
SfaNI GCATC 2 cut(s) 1020, 1219
SfcI CTRYAG 2 cut(s) 1049, 1169
SinI GGWCC 4 cut(s) 602, 643, 695, 734
SmiMI CAYNNNNRTG 1 cut(s) 84
SmlI CTYRAG 1 cut(s) 1147
SmoI CTYRAG 1 cut(s) 1147
SsiI CCGC 9 cut(s) 75, 121, 140, 489, 605, 796, 1200, 1232, 1235
SspMI CTAG 3 cut(s) 257, 281, 1176
StyD4I CCNGG 6 cut(s) 10, 81, 272, 650, 736, 1211
TaaI ACNGT 3 cut(s) 365, 475, 1068
TaiI ACGT 2 cut(s) 957, 1363
TaqI TCGA 9 cut(s) 177, 195, 497, 751, 762, 783, 866, 1125, 1277
TaqII GACCGA 1 cut(s) 1270
TatI WGTACW 1 cut(s) 1178
TauI GCSGC 1 cut(s) 1235
TfiI GAWTC 2 cut(s) 197, 1152
Tru1I TTAA 6 cut(s) 216, 639, 683, 713, 791, 1412
Tru9I TTAA 6 cut(s) 216, 639, 683, 713, 791, 1412
TscAI CASTG 2 cut(s) 438, 807
TseFI GTSAC 2 cut(s) 331, 566
TseI GCWGC 3 cut(s) 64, 449, 1171
Tsp45I GTSAC 2 cut(s) 331, 566
TspDTI ATGAA 1 cut(s) 934
TspGWI ACGGA 1 cut(s) 759
TspRI CASTG 2 cut(s) 438, 807
VpaK11BI GGWCC 4 cut(s) 602, 643, 695, 734
XagI CCTNNNNNAGG 2 cut(s) 258, 1124
XapI RAATTY 2 cut(s) 557, 747
XbaI TCTAGA 1 cut(s) 280
XceI RCATGY 1 cut(s) 885
XmiI GTMKAC 1 cut(s) 866
XspI CTAG 3 cut(s) 257, 281, 1176
ZrmI AGTACT 1 cut(s) 1180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.