Rh1BG022500

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
2946209 .. 2946921
713 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG022500.1

Sequence Viewer

Length: 582 bp
ATGCACCATGCAATCCTCGATGGCAAAACATCAATCTCGATCGTTAAGTCGTGGGCTCATGTATGTAGCGAACAGATTGAAAGTGGCTTGTCCATTGGATCAGAGATTTCGTTACCAGAGAAGCTCAAGCCATTATATGATAGAACGGTCATCTATGATCCGACAGGGCACGGACTCGAATCCATCTACTTAAACGATTGGCAAAACTTGGATGGCCCCAACAACAGAAGCGTAAAGGTTTGGGAATTGAAAGCTCCACCAGATGACTCAGTTCGAAGCATCTTTGAGTTCACACGCGCACAGATACAAACCCTAAGGCAGATGGTACTAGAAAAGGTCCGCTTGGAACCTCCGGTACCTGAAAACTATTTTGGAAATTGCATGATGGGTGTCATGGGGTTTGCGGAAGCAAAGGAGTTATTGGGTGAAGATGGGTTGGTTGTGGCAGTCACAGCAATTAGTGAAACTATAAAGGGTTTAGACAAGAATGAGGTTTTGAAAGGGGCCCACGAGCTTTACTGTTCGAAAATCAAGGACTTGCTTCAGGCTGAGGGGATATATTCTACTGCTGGTTCGCACTGA

Protein Analysis

193

Amino Acids

21.4

Weight (kDa)

5.25

Isoelectric Point (pI)

33.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 98 - 168 4e-07 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 355
AccB1I GGYRCC 1 cut(s) 355
AccII CGCG 1 cut(s) 297
AciI CCGC 2 cut(s) 340, 404
AclWI GGATC 2 cut(s) 106, 152
AcuI CTGAAG 1 cut(s) 527
AfaI GTAC 2 cut(s) 327, 357
AgsI TTSAA 3 cut(s) 80, 250, 499
AjuI GAANNNNNNNTTGG 2 cut(s) 354, 386
AluBI AGCT 3 cut(s) 124, 254, 514
AluI AGCT 3 cut(s) 124, 254, 514
AlwI GGATC 2 cut(s) 106, 152
AoxI GGCC 2 cut(s) 214, 504
ApaI GGGCCC 1 cut(s) 508
Asp718I GGTACC 1 cut(s) 355
AspLEI GCGC 1 cut(s) 299
AspS9I GGNCC 4 cut(s) 215, 337, 504, 505
AsuHPI GGTGA 1 cut(s) 437
AsuII TTCGAA 2 cut(s) 274, 524
AvaII GGWCC 1 cut(s) 337
AxyI CCTNAGG 1 cut(s) 314
BaeGI GKGCMC 2 cut(s) 171, 508
BanI GGYRCC 1 cut(s) 355
BanII GRGCYC 2 cut(s) 58, 508
BauI CACGAG 1 cut(s) 509
BbvCI CCTCAGC 1 cut(s) 549
BccI CCATC 6 cut(s) 14, 191, 206, 316, 379, 425
BfaI CTAG 1 cut(s) 329
Bme18I GGWCC 1 cut(s) 337
BmgT120I GGNCC 4 cut(s) 215, 337, 504, 505
BmiI GGNNCC 5 cut(s) 217, 348, 357, 505, 506
BmsI GCATC 1 cut(s) 288
Bpu10I CCTNAGC 1 cut(s) 549
Bpu14I TTCGAA 2 cut(s) 274, 524
BpuEI CTTGAG 1 cut(s) 110
BsaWI WCCGGW 1 cut(s) 352
Bse21I CCTNAGG 1 cut(s) 314
BseGI GGATG 1 cut(s) 217
BseMII CTCAG 2 cut(s) 282, 540
BseSI GKGCMC 2 cut(s) 171, 508
Bsh1236I CGCG 1 cut(s) 297
Bsh1285I CGRYCG 1 cut(s) 42
BshFI GGCC 2 cut(s) 216, 506
BshNI GGYRCC 1 cut(s) 355
BsiEI CGRYCG 1 cut(s) 42
BsiSI CCGG 1 cut(s) 353
BsnI GGCC 2 cut(s) 216, 506
Bsp119I TTCGAA 2 cut(s) 274, 524
Bsp120I GGGCCC 1 cut(s) 504
Bsp1286I GDGCHC 3 cut(s) 58, 171, 508
Bsp143I GATC 3 cut(s) 39, 98, 157
BspACI CCGC 2 cut(s) 340, 404
BspANI GGCC 2 cut(s) 216, 506
BspCNI CTCAG 2 cut(s) 281, 541
BspFNI CGCG 1 cut(s) 297
BspLI GGNNCC 5 cut(s) 217, 348, 357, 505, 506
BspPI GGATC 2 cut(s) 106, 152
BspT104I TTCGAA 2 cut(s) 274, 524
BspT107I GGYRCC 1 cut(s) 355
BssMI GATC 3 cut(s) 39, 98, 157
BssSI CACGAG 1 cut(s) 509
Bst2BI CACGAG 1 cut(s) 509
Bst4CI ACNGT 2 cut(s) 148, 521
BstBI TTCGAA 2 cut(s) 274, 524
BstDEI CTNAG 3 cut(s) 268, 314, 549
BstF5I GGATG 1 cut(s) 217
BstFNI CGCG 1 cut(s) 297
BstHHI GCGC 1 cut(s) 299
BstKTI GATC 3 cut(s) 42, 101, 160
BstMBI GATC 3 cut(s) 39, 98, 157
BstMCI CGRYCG 1 cut(s) 42
BstMWI GCNNNNNNNGC 1 cut(s) 452
BstSLI GKGCMC 2 cut(s) 171, 508
BstUI CGCG 1 cut(s) 297
Bsu36I CCTNAGG 1 cut(s) 314
BsuRI GGCC 2 cut(s) 216, 506
BtsCI GGATG 1 cut(s) 217
BtsIMutI CAGTG 1 cut(s) 577
CfoI GCGC 1 cut(s) 299
Cfr13I GGNCC 4 cut(s) 215, 337, 504, 505
Csp6I GTAC 2 cut(s) 326, 356
CviAII CATG 4 cut(s) 8, 59, 382, 394
CviJI RGCY 9 cut(s) 56, 87, 124, 130, 216, 254, 506, 514, 548
CviKI_1 RGCY 9 cut(s) 56, 87, 124, 130, 216, 254, 506, 514, 548
CviQI GTAC 2 cut(s) 326, 356
DdeI CTNAG 3 cut(s) 268, 314, 549
DpnI GATC 3 cut(s) 41, 100, 159
DpnII GATC 3 cut(s) 39, 98, 157
Eco24I GRGCYC 2 cut(s) 58, 508
Eco47I GGWCC 1 cut(s) 337
Eco57I CTGAAG 1 cut(s) 527
Eco81I CCTNAGG 1 cut(s) 314
EcoO109I RGGNCCY 1 cut(s) 504
EcoT38I GRGCYC 2 cut(s) 58, 508
FaeI CATG 4 cut(s) 11, 62, 385, 397
FalI AAGNNNNNCTT 2 cut(s) 326, 358
FatI CATG 4 cut(s) 7, 58, 381, 393
FokI GGATG 1 cut(s) 224
FriOI GRGCYC 2 cut(s) 58, 508
FspBI CTAG 1 cut(s) 329
GlaI GCGC 1 cut(s) 298
HaeIII GGCC 2 cut(s) 216, 506
HapII CCGG 1 cut(s) 353
HhaI GCGC 1 cut(s) 299
Hin1II CATG 4 cut(s) 11, 62, 385, 397
Hin6I GCGC 1 cut(s) 297
HinP1I GCGC 1 cut(s) 297
HinfI GANTC 3 cut(s) 174, 179, 266
HpaII CCGG 1 cut(s) 353
HphI GGTGA 1 cut(s) 437
Hpy166II GTNNAC 1 cut(s) 291
Hpy188I TCNGA 2 cut(s) 103, 162
Hpy188III TCNNGA 1 cut(s) 37
Hpy8I GTNNAC 1 cut(s) 291
HpyCH4III ACNGT 2 cut(s) 148, 521
HpyCH4V TGCA 3 cut(s) 4, 11, 381
HpyF10VI GCNNNNNNNGC 1 cut(s) 452
HpyF3I CTNAG 3 cut(s) 268, 314, 549
Hsp92II CATG 4 cut(s) 11, 62, 385, 397
HspAI GCGC 1 cut(s) 297
KpnI GGTACC 1 cut(s) 359
Kzo9I GATC 3 cut(s) 39, 98, 157
LmnI GCTCC 1 cut(s) 259
LpnPI CCDG 7 cut(s) 129, 150, 273, 366, 372, 530, 555
LweI GCATC 1 cut(s) 288
MaeI CTAG 1 cut(s) 329
MaeIII GTNAC 2 cut(s) 111, 448
MalI GATC 3 cut(s) 41, 100, 159
MboI GATC 3 cut(s) 39, 98, 157
MboII GAAGA 1 cut(s) 440
MhlI GDGCHC 3 cut(s) 58, 171, 508
MluCI AATT 3 cut(s) 245, 376, 456
MlyI GAGTC 2 cut(s) 168, 260
MmeI TCCRAC 1 cut(s) 185
MnlI CCTC 4 cut(s) 26, 360, 484, 544
MseI TTAA 2 cut(s) 45, 191
MspI CCGG 1 cut(s) 353
MvnI CGCG 1 cut(s) 297
MwoI GCNNNNNNNGC 1 cut(s) 452
NdeII GATC 3 cut(s) 39, 98, 157
NlaIII CATG 4 cut(s) 11, 62, 385, 397
NlaIV GGNNCC 5 cut(s) 217, 348, 357, 505, 506
NmuCI GTSAC 1 cut(s) 448
NspV TTCGAA 2 cut(s) 274, 524
PfeI GAWTC 1 cut(s) 179
Ple19I CGATCG 1 cut(s) 42
PleI GAGTC 2 cut(s) 168, 260
PpsI GAGTC 2 cut(s) 168, 260
PspN4I GGNNCC 5 cut(s) 217, 348, 357, 505, 506
PspOMI GGGCCC 1 cut(s) 504
PspPI GGNCC 4 cut(s) 215, 337, 504, 505
PsrI GAACNNNNNNTAC 2 cut(s) 339, 371
PvuI CGATCG 1 cut(s) 42
RsaI GTAC 2 cut(s) 327, 357
RsaNI GTAC 2 cut(s) 326, 356
SaqAI TTAA 2 cut(s) 45, 191
Sau3AI GATC 3 cut(s) 39, 98, 157
Sau96I GGNCC 4 cut(s) 215, 337, 504, 505
SchI GAGTC 2 cut(s) 168, 260
SduI GDGCHC 3 cut(s) 58, 171, 508
SetI ASST 8 cut(s) 126, 240, 256, 339, 352, 361, 495, 516
SfaNI GCATC 1 cut(s) 288
SfuI TTCGAA 2 cut(s) 274, 524
SinI GGWCC 1 cut(s) 337
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
Sse9I AATT 3 cut(s) 245, 376, 456
SsiI CCGC 2 cut(s) 340, 404
SspMI CTAG 1 cut(s) 329
TaaI ACNGT 2 cut(s) 148, 521
TaqI TCGA 5 cut(s) 18, 38, 177, 274, 524
TasI AATT 3 cut(s) 245, 376, 456
TfiI GAWTC 1 cut(s) 179
Tru1I TTAA 2 cut(s) 45, 191
Tru9I TTAA 2 cut(s) 45, 191
TseFI GTSAC 1 cut(s) 448
Tsp45I GTSAC 1 cut(s) 448
TspGWI ACGGA 1 cut(s) 186
VpaK11BI GGWCC 1 cut(s) 337
XspI CTAG 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.