MD17G1060500.v1.1

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000138
Physical Location & Seq
Reverse (-)
4914791 .. 4916350
1560 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1060500.v1.1.491

Sequence Viewer

Length: 1560 bp
ATGACAGACCCAAATAACTCTCTGAAAGTCGTTGAAGTTTGTAGGGTAGCTCCACAAACAAAACCTGGCTCATCAGACTCAGCATTCTCATCAGGAGTAGAGAATCTTACCTACAACAAAGATGGTCCCGTTTCAGCAGTATTCCAAATCAATCACACACTGGTGCCTCACGAGTTGTCTCTTCCGCTAACCCTCTTCGACCTCCTATGGATAAGGTTTCCGCCCTTCCATCGCCTTTTGTTCTATGAAATATTGCCATGCTCTTCACCTGCAGACACTTTACTCTTTTTTCATTCAACAATTATTCCAAAACTCAAAACGTCGCTCTCTATCACCCTCCAACATTTTCTACCTCTAGCCGGAAACATCACGTGGCCCGAGAACTCCCACAAACCCACCCTCGATTACGTCCAAGGTGACACCCTTTCGCTCACGGTATCCGAATCTGATGCCGATTTCCACCACCTCTCAAGCAATGACTTTAAAATCGAATCCAAAGAATACTATCCCCTCGTACCCCAACTGGCAGTATCTCATGAAAAAGCGGCCGTGATGGCGTTGCAAATCACCATCTTTCCCAGCGGCGGTTTTTCCATTGGCATATCGATGCACCATGCAGCTATTGACGGCAAGACTCTCTTCTTGTTTCTGAAATCATGGGCTCACATATGCAAACATGTTCATCAATCTGATGATATTTTGTTACCTGATCAGCTCAAACCATTTTATGACAGAAGCGTAATCCAACACCCGATCGGTCTCCAACTCGAAGCGATCTACTTGAACCAGTTTCTAAACATGGACGGAAGACAAAACAATCGAAGCTTGATGGTTGCAGCTCAATATAAATCTCTAGTGGTACCGAATTCCTTTCGAGGCATCTTCGAATTCACAAGCGCGAACATACAAGCTTTACGGAAAAGGGTCACGACCAGAATGAAAGAGATCACCACCAACCAACAACAAGAACGTGATCCATCGGTTCATATGTCAACTTTTTCGCTAACGTGCGCTTACACATGGGTTTGCTTAGTAAAAGCAGAACAAGGGGAGGAAGAAGAAATAAAAGGGGACAAGATACCTTTGTTTATTAGCGTGGACTGCCGGTCACGCTTAGCCCCTCCTTTACCTGCAAACTTTTTCGGAAACATAGTCACGGCCTACCTAACAGTTGCAGAAAGAAAAGGACTTTTGGGAGAAGACGGGTTGGTTATGGCGATAATTGCGATCAGTGAAGCCATTAAAGGTTTGGACAACGGGGTTTTGAATGGCGTGGAAGATTTGGTTTCACGATTGTACCTCTCTGATGAACAGAAGAGTACATCTGATCCTCGCACAGTATTCACGACCGCTGGATCGCATCGGTTTGACATGTATGGCACTGATTTTGGATGGGGAAGGCCGAGGAGTACCGAAGTGGTTCGGAAAAATAGTACCGGAGCGATCACTTTTGCAGATGGCAAGAACGGTGGTGGCGCTGTTGACATTGGGGTGGTTTTGGAAAAACATCATATGGAGGCATTTGCTTCTCTATTTGCCAAGGGTCTTGAAACCCTTTGA

Protein Analysis

520

Amino Acids

57.6

Weight (kDa)

6.09

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 96 - 510 2.2e-50 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 277
Acc36I ACCTGC 2 cut(s) 277, 1138
Acc65I GGTACC 1 cut(s) 859
AccB1I GGYRCC 2 cut(s) 163, 859
AccII CGCG 1 cut(s) 899
AciI CCGC 6 cut(s) 185, 221, 545, 582, 585, 1350
AclWI GGATC 3 cut(s) 968, 1322, 1363
AcoI YGGCCR 1 cut(s) 546
AcsI RAATTY 2 cut(s) 865, 887
AcvI CACGTG 1 cut(s) 372
AfaI GTAC 6 cut(s) 516, 861, 1298, 1321, 1411, 1435
AfiI CCNNNNNNNGG 2 cut(s) 359, 584
AflIII ACRYGT 2 cut(s) 676, 1371
AgsI TTSAA 5 cut(s) 35, 297, 784, 1267, 1550
AhdI GACNNNNNGTC 1 cut(s) 1105
AjnI CCWGG 1 cut(s) 64
AleI CACNNNNGTG 1 cut(s) 161
AluBI AGCT 6 cut(s) 50, 620, 715, 825, 839, 911
AluI AGCT 6 cut(s) 50, 620, 715, 825, 839, 911
Alw26I GTCTC 2 cut(s) 183, 764
AlwI GGATC 3 cut(s) 968, 1322, 1363
Ama87I CYCGRG 1 cut(s) 377
AoxI GGCC 4 cut(s) 374, 546, 1158, 1400
ApeKI GCWGC 2 cut(s) 617, 836
ApoI RAATTY 2 cut(s) 865, 887
Asp700I GAANNNNTTC 1 cut(s) 1419
Asp718I GGTACC 1 cut(s) 859
AspLEI GCGC 3 cut(s) 899, 1013, 1478
AspS9I GGNCC 2 cut(s) 125, 375
AsuHPI GGTGA 5 cut(s) 258, 325, 428, 559, 940
AsuII TTCGAA 1 cut(s) 885
AvaI CYCGRG 1 cut(s) 377
AvaII GGWCC 1 cut(s) 125
BaeI ACNNNNGTAYC 4 cut(s) 1070, 1103, 1280, 1313
BanI GGYRCC 2 cut(s) 163, 859
BanII GRGCYC 1 cut(s) 664
BauI CACGAG 1 cut(s) 170
BbrPI CACGTG 1 cut(s) 372
BbsI GAAGAC 2 cut(s) 814, 1206
BbvI GCAGC 2 cut(s) 629, 848
BccI CCATC 8 cut(s) 116, 237, 547, 578, 823, 985, 1386, 1451
BceAI ACGGC 3 cut(s) 533, 643, 1173
BcgI CGANNNNNNTGC 2 cut(s) 431, 465
BciT130I CCWGG 1 cut(s) 66
BciVI GTATCC 1 cut(s) 448
BclI TGATCA 1 cut(s) 709
BcoDI GTCTC 2 cut(s) 183, 764
BfaI CTAG 2 cut(s) 356, 854
BfmI CTRYAG 1 cut(s) 270
BfoI RGCGCY 1 cut(s) 1479
BfuAI ACCTGC 2 cut(s) 277, 1138
BfuI GTATCC 1 cut(s) 448
BglI GCCNNNNNGGC 1 cut(s) 554
BisI GCNGC 4 cut(s) 546, 583, 618, 837
BlpI GCTNAGC 1 cut(s) 1114
BlsI GCNGC 4 cut(s) 547, 584, 619, 838
Bme1390I CCNGG 1 cut(s) 66
Bme18I GGWCC 1 cut(s) 125
BmeRI GACNNNNNGTC 1 cut(s) 1105
BmeT110I CYCGRG 1 cut(s) 377
BmgT120I GGNCC 2 cut(s) 125, 375
BmiI GGNNCC 3 cut(s) 127, 165, 861
BmrFI CCNGG 1 cut(s) 66
BmsI GCATC 4 cut(s) 439, 597, 888, 1369
BpiI GAAGAC 2 cut(s) 814, 1206
Bpu1102I GCTNAGC 1 cut(s) 1114
Bpu14I TTCGAA 1 cut(s) 885
BpuEI CTTGAG 1 cut(s) 454
Bsa29I ATCGAT 1 cut(s) 605
BsaAI YACGTR 1 cut(s) 372
BsaI GGTCTC 1 cut(s) 764
BsaJI CCNNGG 3 cut(s) 412, 1403, 1539
BsaWI WCCGGW 1 cut(s) 1436
Bsc4I CCNNNNNNNGG 2 cut(s) 359, 584
Bse118I RCCGGY 1 cut(s) 1104
Bse1I ACTGG 3 cut(s) 165, 528, 787
Bse3DI GCAATG 1 cut(s) 481
BseBI CCWGG 1 cut(s) 66
BseCI ATCGAT 1 cut(s) 605
BseDI CCNNGG 3 cut(s) 412, 1403, 1539
BseGI GGATG 1 cut(s) 1397
BseLI CCNNNNNNNGG 2 cut(s) 359, 584
BseMI GCAATG 1 cut(s) 481
BseMII CTCAG 1 cut(s) 93
BseNI ACTGG 3 cut(s) 165, 528, 787
BseRI GAGGAG 1 cut(s) 1420
BseX3I CGGCCG 1 cut(s) 546
BseXI GCAGC 2 cut(s) 629, 848
BseYI CCCAGC 1 cut(s) 578
Bsh1236I CGCG 1 cut(s) 899
Bsh1285I CGRYCG 3 cut(s) 549, 756, 1350
BshFI GGCC 4 cut(s) 376, 548, 1160, 1402
BshNI GGYRCC 2 cut(s) 163, 859
BshVI ATCGAT 1 cut(s) 605
BsiEI CGRYCG 3 cut(s) 549, 756, 1350
BsiHKCI CYCGRG 1 cut(s) 377
BsiSI CCGG 3 cut(s) 360, 1105, 1437
BslFI GGGAC 2 cut(s) 111, 1085
BslI CCNNNNNNNGG 2 cut(s) 359, 584
BsmAI GTCTC 2 cut(s) 183, 764
BsmFI GGGAC 2 cut(s) 111, 1085
BsmI GAATGC 1 cut(s) 83
BsnI GGCC 4 cut(s) 376, 548, 1160, 1402
Bso31I GGTCTC 1 cut(s) 764
BsoBI CYCGRG 1 cut(s) 377
Bsp119I TTCGAA 1 cut(s) 885
Bsp1286I GDGCHC 1 cut(s) 664
Bsp143I GATC 9 cut(s) 709, 753, 774, 945, 973, 1227, 1327, 1355, 1443
Bsp1720I GCTNAGC 1 cut(s) 1114
BspACI CCGC 6 cut(s) 185, 221, 545, 582, 585, 1350
BspANI GGCC 4 cut(s) 376, 548, 1160, 1402
BspCNI CTCAG 1 cut(s) 92
BspDI ATCGAT 1 cut(s) 605
BspFNI CGCG 1 cut(s) 899
BspHI TCATGA 1 cut(s) 535
BspLI GGNNCC 3 cut(s) 127, 165, 861
BspMAI CTGCAG 1 cut(s) 274
BspMI ACCTGC 2 cut(s) 277, 1138
BspPI GGATC 3 cut(s) 968, 1322, 1363
BspQI GCTCTTC 1 cut(s) 268
BspT104I TTCGAA 1 cut(s) 885
BspT107I GGYRCC 2 cut(s) 163, 859
BspTNI GGTCTC 1 cut(s) 764
BsrDI GCAATG 1 cut(s) 481
BsrFI RCCGGY 1 cut(s) 1104
BsrI ACTGG 3 cut(s) 165, 528, 787
BssAI RCCGGY 1 cut(s) 1104
BssECI CCNNGG 3 cut(s) 412, 1403, 1539
BssMI GATC 9 cut(s) 709, 753, 774, 945, 973, 1227, 1327, 1355, 1443
BssSI CACGAG 1 cut(s) 170
BssT1I CCWWGG 2 cut(s) 412, 1539
Bst2BI CACGAG 1 cut(s) 170
Bst2UI CCWGG 1 cut(s) 66
Bst4CI ACNGT 4 cut(s) 436, 1171, 1339, 1469
Bst6I CTCTTC 5 cut(s) 186, 200, 268, 644, 1310
BstBAI YACGTR 1 cut(s) 372
BstBI TTCGAA 1 cut(s) 885
BstDEI CTNAG 3 cut(s) 79, 1030, 1114
BstF5I GGATG 1 cut(s) 1397
BstFNI CGCG 1 cut(s) 899
BstH2I RGCGCY 1 cut(s) 1479
BstHHI GCGC 3 cut(s) 899, 1013, 1478
BstKTI GATC 9 cut(s) 712, 756, 777, 948, 976, 1230, 1330, 1358, 1446
BstMAI GTCTC 2 cut(s) 183, 764
BstMBI GATC 9 cut(s) 709, 753, 774, 945, 973, 1227, 1327, 1355, 1443
BstMCI CGRYCG 3 cut(s) 549, 756, 1350
BstMWI GCNNNNNNNGC 4 cut(s) 554, 1101, 1110, 1223
BstNI CCWGG 1 cut(s) 66
BstNSI RCATGY 2 cut(s) 680, 1375
BstSCI CCNGG 1 cut(s) 64
BstSFI CTRYAG 1 cut(s) 270
BstUI CGCG 1 cut(s) 899
BstV1I GCAGC 2 cut(s) 629, 848
BstV2I GAAGAC 2 cut(s) 814, 1206
BstZI CGGCCG 1 cut(s) 546
Bsu15I ATCGAT 1 cut(s) 605
BsuI GTATCC 1 cut(s) 448
BsuRI GGCC 4 cut(s) 376, 548, 1160, 1402
BsuTUI ATCGAT 1 cut(s) 605
BtgZI GCGATG 1 cut(s) 215
BtsCI GGATG 1 cut(s) 1397
BtsIMutI CAGTG 3 cut(s) 158, 1237, 1380
BveI ACCTGC 2 cut(s) 277, 1138
CciI TCATGA 1 cut(s) 535
CfoI GCGC 3 cut(s) 899, 1013, 1478
Cfr10I RCCGGY 1 cut(s) 1104
Cfr13I GGNCC 2 cut(s) 125, 375
ClaI ATCGAT 1 cut(s) 605
Csp6I GTAC 6 cut(s) 515, 860, 1297, 1320, 1410, 1434
CspCI CAANNNNNGTGG 2 cut(s) 1450, 1485
CviAII CATG 8 cut(s) 258, 536, 614, 657, 677, 799, 1020, 1372
CviQI GTAC 6 cut(s) 515, 860, 1297, 1320, 1410, 1434
DdeI CTNAG 3 cut(s) 79, 1030, 1114
DpnI GATC 9 cut(s) 711, 755, 776, 947, 975, 1229, 1329, 1357, 1445
DpnII GATC 9 cut(s) 709, 753, 774, 945, 973, 1227, 1327, 1355, 1443
DraI TTTAAA 1 cut(s) 484
DriI GACNNNNNGTC 1 cut(s) 1105
EaeI YGGCCR 1 cut(s) 546
EagI CGGCCG 1 cut(s) 546
Eam1104I CTCTTC 5 cut(s) 186, 200, 268, 644, 1310
Eam1105I GACNNNNNGTC 1 cut(s) 1105
EarI CTCTTC 5 cut(s) 186, 200, 268, 644, 1310
EciI GGCGGA 1 cut(s) 210
EclXI CGGCCG 1 cut(s) 546
Eco130I CCWWGG 2 cut(s) 412, 1539
Eco24I GRGCYC 1 cut(s) 664
Eco31I GGTCTC 1 cut(s) 764
Eco47I GGWCC 1 cut(s) 125
Eco52I CGGCCG 1 cut(s) 546
Eco72I CACGTG 1 cut(s) 372
Eco88I CYCGRG 1 cut(s) 377
EcoRI GAATTC 2 cut(s) 865, 887
EcoRII CCWGG 1 cut(s) 64
EcoT14I CCWWGG 2 cut(s) 412, 1539
EcoT38I GRGCYC 1 cut(s) 664
ErhI CCWWGG 2 cut(s) 412, 1539
FaeI CATG 8 cut(s) 261, 539, 617, 660, 680, 802, 1023, 1375
FalI AAGNNNNNCTT 2 cut(s) 623, 655
FaqI GGGAC 2 cut(s) 111, 1085
FatI CATG 8 cut(s) 257, 535, 613, 656, 676, 798, 1019, 1371
FauNDI CATATG 3 cut(s) 668, 987, 1512
FbaI TGATCA 1 cut(s) 709
Fnu4HI GCNGC 4 cut(s) 546, 583, 618, 837
FokI GGATG 1 cut(s) 1404
FriOI GRGCYC 1 cut(s) 664
Fsp4HI GCNGC 4 cut(s) 546, 583, 618, 837
FspBI CTAG 2 cut(s) 356, 854
GlaI GCGC 3 cut(s) 898, 1012, 1477
GluI GCNGC 4 cut(s) 546, 583, 618, 837
GsaI CCCAGC 1 cut(s) 582
HaeII RGCGCY 1 cut(s) 1479
HaeIII GGCC 4 cut(s) 376, 548, 1160, 1402
HapII CCGG 3 cut(s) 360, 1105, 1437
HhaI GCGC 3 cut(s) 899, 1013, 1478
Hin1II CATG 8 cut(s) 261, 539, 617, 660, 680, 802, 1023, 1375
Hin6I GCGC 3 cut(s) 897, 1011, 1476
HinP1I GCGC 3 cut(s) 897, 1011, 1476
HincII GTYRAC 2 cut(s) 993, 1483
HindII GTYRAC 2 cut(s) 993, 1483
HindIII AAGCTT 2 cut(s) 823, 909
HinfI GANTC 5 cut(s) 77, 103, 443, 491, 634
HpaII CCGG 3 cut(s) 360, 1105, 1437
HphI GGTGA 5 cut(s) 258, 325, 428, 559, 940
Hpy166II GTNNAC 3 cut(s) 993, 1099, 1483
Hpy188III TCNNGA 7 cut(s) 93, 170, 536, 928, 1290, 1345, 1547
Hpy8I GTNNAC 3 cut(s) 993, 1099, 1483
Hpy99I CGWCG 1 cut(s) 325
HpyAV CCTTC 2 cut(s) 235, 1392
HpyCH4III ACNGT 4 cut(s) 436, 1171, 1339, 1469
HpyCH4IV ACGT 5 cut(s) 320, 371, 408, 970, 1007
HpyCH4V TGCA 9 cut(s) 272, 562, 610, 617, 672, 836, 1133, 1175, 1454
HpyF10VI GCNNNNNNNGC 4 cut(s) 554, 1101, 1110, 1223
HpyF3I CTNAG 3 cut(s) 79, 1030, 1114
HpySE526I ACGT 5 cut(s) 320, 371, 408, 970, 1007
Hsp92II CATG 8 cut(s) 261, 539, 617, 660, 680, 802, 1023, 1375
HspAI GCGC 3 cut(s) 897, 1011, 1476
KpnI GGTACC 1 cut(s) 863
Ksp22I TGATCA 1 cut(s) 709
Kzo9I GATC 9 cut(s) 709, 753, 774, 945, 973, 1227, 1327, 1355, 1443
LguI GCTCTTC 1 cut(s) 268
LmnI GCTCC 2 cut(s) 55, 1439
Lsp1109I GCAGC 2 cut(s) 629, 848
LweI GCATC 4 cut(s) 439, 597, 888, 1369
MaeI CTAG 2 cut(s) 356, 854
MaeII ACGT 5 cut(s) 320, 371, 408, 970, 1007
MaeIII GTNAC 5 cut(s) 416, 702, 925, 1107, 1153
MalI GATC 9 cut(s) 711, 755, 776, 947, 975, 1229, 1329, 1357, 1445
MboI GATC 9 cut(s) 709, 753, 774, 945, 973, 1227, 1327, 1355, 1443
MhlI GDGCHC 1 cut(s) 664
MluCI AATT 4 cut(s) 300, 865, 887, 1221
MlyI GAGTC 2 cut(s) 71, 628
MmeI TCCRAC 3 cut(s) 364, 769, 787
MroXI GAANNNNTTC 1 cut(s) 1419
MseI TTAA 2 cut(s) 483, 1242
MslI CAYNNNNRTG 3 cut(s) 161, 605, 1490
MspA1I CMGCKG 2 cut(s) 582, 1352
MspI CCGG 3 cut(s) 360, 1105, 1437
MspR9I CCNGG 1 cut(s) 66
Mva1269I GAATGC 1 cut(s) 83
MvaI CCWGG 1 cut(s) 66
MvnI CGCG 1 cut(s) 899
MwoI GCNNNNNNNGC 4 cut(s) 554, 1101, 1110, 1223
NdeI CATATG 3 cut(s) 668, 987, 1512
NdeII GATC 9 cut(s) 709, 753, 774, 945, 973, 1227, 1327, 1355, 1443
NlaIII CATG 8 cut(s) 261, 539, 617, 660, 680, 802, 1023, 1375
NlaIV GGNNCC 3 cut(s) 127, 165, 861
NmeAIII GCCGAG 1 cut(s) 1428
NmuCI GTSAC 4 cut(s) 416, 925, 1107, 1153
NspI RCATGY 2 cut(s) 680, 1375
NspV TTCGAA 1 cut(s) 885
OliI CACNNNNGTG 1 cut(s) 161
PagI TCATGA 1 cut(s) 535
PaqCI CACCTGC 1 cut(s) 277
PciI ACATGT 2 cut(s) 676, 1371
PciSI GCTCTTC 1 cut(s) 268
PctI GAATGC 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 1419
PfeI GAWTC 3 cut(s) 103, 443, 491
PkrI GCNGC 4 cut(s) 547, 584, 619, 838
Ple19I CGATCG 1 cut(s) 756
PleI GAGTC 2 cut(s) 71, 628
PmaCI CACGTG 1 cut(s) 372
PmlI CACGTG 1 cut(s) 372
PpsI GAGTC 2 cut(s) 71, 628
Ppu21I YACGTR 1 cut(s) 372
PscI ACATGT 2 cut(s) 676, 1371
Psp6I CCWGG 1 cut(s) 64
PspCI CACGTG 1 cut(s) 372
PspFI CCCAGC 1 cut(s) 578
PspGI CCWGG 1 cut(s) 64
PspN4I GGNNCC 3 cut(s) 127, 165, 861
PspPI GGNCC 2 cut(s) 125, 375
PstI CTGCAG 1 cut(s) 274
PvuI CGATCG 1 cut(s) 756
RsaI GTAC 6 cut(s) 516, 861, 1298, 1321, 1411, 1435
RsaNI GTAC 6 cut(s) 515, 860, 1297, 1320, 1410, 1434
RseI CAYNNNNRTG 3 cut(s) 161, 605, 1490
SapI GCTCTTC 1 cut(s) 268
SaqAI TTAA 2 cut(s) 483, 1242
SatI GCNGC 4 cut(s) 546, 583, 618, 837
Sau3AI GATC 9 cut(s) 709, 753, 774, 945, 973, 1227, 1327, 1355, 1443
Sau96I GGNCC 2 cut(s) 125, 375
SchI GAGTC 2 cut(s) 71, 628
ScrFI CCNGG 1 cut(s) 66
SduI GDGCHC 1 cut(s) 664
SfaNI GCATC 4 cut(s) 439, 597, 888, 1369
SfcI CTRYAG 1 cut(s) 270
SfuI TTCGAA 1 cut(s) 885
SinI GGWCC 1 cut(s) 125
SmiMI CAYNNNNRTG 3 cut(s) 161, 605, 1490
SmlI CTYRAG 1 cut(s) 469
SmoI CTYRAG 1 cut(s) 469
Sse9I AATT 4 cut(s) 300, 865, 887, 1221
SsiI CCGC 6 cut(s) 185, 221, 545, 582, 585, 1350
SspI AATATT 1 cut(s) 252
SspMI CTAG 2 cut(s) 356, 854
StyD4I CCNGG 1 cut(s) 64
StyI CCWWGG 2 cut(s) 412, 1539
TaaI ACNGT 4 cut(s) 436, 1171, 1339, 1469
TaiI ACGT 5 cut(s) 323, 374, 411, 973, 1010
TaqI TCGA 8 cut(s) 198, 402, 489, 605, 768, 820, 874, 885
TaqII GACCGA 1 cut(s) 746
TasI AATT 4 cut(s) 300, 865, 887, 1221
TatI WGTACW 1 cut(s) 1319
TauI GCSGC 2 cut(s) 548, 585
TfiI GAWTC 3 cut(s) 103, 443, 491
Tru1I TTAA 2 cut(s) 483, 1242
Tru9I TTAA 2 cut(s) 483, 1242
TscAI CASTG 3 cut(s) 165, 1237, 1387
TseFI GTSAC 4 cut(s) 416, 925, 1107, 1153
TseI GCWGC 2 cut(s) 617, 836
Tsp45I GTSAC 4 cut(s) 416, 925, 1107, 1153
TspDTI ATGAA 7 cut(s) 261, 281, 552, 671, 953, 974, 1323
TspGWI ACGGA 2 cut(s) 819, 931
TspRI CASTG 3 cut(s) 165, 1237, 1387
VpaK11BI GGWCC 1 cut(s) 125
XapI RAATTY 2 cut(s) 865, 887
XceI RCATGY 2 cut(s) 680, 1375
XcmI CCANNNNNNNNNTGG 1 cut(s) 1246
XmnI GAANNNNTTC 1 cut(s) 1419
XspI CTAG 2 cut(s) 356, 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.