RchiOBHm_Chr2g0165681

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
80561684 .. 80562199
516 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53362

Sequence Viewer

Length: 516 bp
ATGGGTTTTCTTAGCCAAGGCAGAGGAAATCAAAGGTGGAAAACGGTGTTGATCTTTAGTGTGGACTGTAGATCTCGCTTGGACCCTCCCATACCTGAAACCTATTTCAGGAATCGCATAGAAGGCCGTGTAGCGGTTGCAGAAACAGAAGGGCTATTGGGTGAAGATGGGTTATTTGTGGCCGTAAATGCAATCACTGAGGCTTTGAGAAGTTTGGATGATGGGATTTTCAATGGGGCAGAGAATTGGGTTTCGAAATTCCTCGACTTTTCCCTCTATAAGAGAATATATTCGATTGCCGGTTCACAATGGTTTGGGGTTTATAACACTGATTTCAGATGGGGTAAACCTAAGAAGGTTGAGCTTGTTTCCATAGACAAGACTGAAGCGGTCTCTCTTTCAGATAGCAAAAATGGTGGTGGAGCTGTTGAGGTTGGATTGGCTTTGAAGAAACAATATATGGAGACTTTTGTTTCTCTATTTCGTAGTCAATCCAAGGTGTTTGAACAACTCTGA

Protein Analysis

171

Amino Acids

19.22

Weight (kDa)

7.77

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 13 - 159 4.1e-17 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 324
AciI CCGC 2 cut(s) 134, 389
AcoI YGGCCR 1 cut(s) 180
AcsI RAATTY 1 cut(s) 257
AcuI CTGAAG 1 cut(s) 405
AfiI CCNNNNNNNGG 2 cut(s) 108, 133
AgsI TTSAA 3 cut(s) 232, 448, 506
AluBI AGCT 2 cut(s) 364, 425
AluI AGCT 2 cut(s) 364, 425
Alw26I GTCTC 2 cut(s) 397, 458
AoxI GGCC 2 cut(s) 124, 180
ApoI RAATTY 1 cut(s) 257
Asp700I GAANNNNTTC 1 cut(s) 289
AspS9I GGNCC 1 cut(s) 82
AsuHPI GGTGA 1 cut(s) 173
AsuII TTCGAA 1 cut(s) 254
AvaII GGWCC 1 cut(s) 82
BccI CCATC 3 cut(s) 161, 215, 333
BceAI ACGGC 2 cut(s) 111, 167
BcoDI GTCTC 2 cut(s) 397, 458
BfmI CTRYAG 1 cut(s) 67
BglII AGATCT 1 cut(s) 71
Bme18I GGWCC 1 cut(s) 82
BmgT120I GGNCC 1 cut(s) 82
BmiI GGNNCC 1 cut(s) 84
Bpu14I TTCGAA 1 cut(s) 254
BsaI GGTCTC 1 cut(s) 397
BsaJI CCNNGG 2 cut(s) 16, 495
Bsc4I CCNNNNNNNGG 2 cut(s) 108, 133
Bse118I RCCGGY 1 cut(s) 299
BseDI CCNNGG 2 cut(s) 16, 495
BseGI GGATG 1 cut(s) 223
BseLI CCNNNNNNNGG 2 cut(s) 108, 133
BseMII CTCAG 1 cut(s) 189
BshFI GGCC 2 cut(s) 126, 182
BsiSI CCGG 1 cut(s) 300
BslI CCNNNNNNNGG 2 cut(s) 108, 133
BsmAI GTCTC 2 cut(s) 397, 458
BsnI GGCC 2 cut(s) 126, 182
Bso31I GGTCTC 1 cut(s) 397
Bsp119I TTCGAA 1 cut(s) 254
Bsp143I GATC 2 cut(s) 51, 71
BspACI CCGC 2 cut(s) 134, 389
BspANI GGCC 2 cut(s) 126, 182
BspCNI CTCAG 1 cut(s) 190
BspLI GGNNCC 1 cut(s) 84
BspT104I TTCGAA 1 cut(s) 254
BspTNI GGTCTC 1 cut(s) 397
BsrFI RCCGGY 1 cut(s) 299
BssAI RCCGGY 1 cut(s) 299
BssECI CCNNGG 2 cut(s) 16, 495
BssMI GATC 2 cut(s) 51, 71
BssT1I CCWWGG 2 cut(s) 16, 495
Bst4CI ACNGT 2 cut(s) 46, 68
BstBI TTCGAA 1 cut(s) 254
BstDEI CTNAG 3 cut(s) 11, 198, 351
BstENI CCTNNNNNAGG 1 cut(s) 106
BstF5I GGATG 1 cut(s) 223
BstKTI GATC 2 cut(s) 54, 74
BstMAI GTCTC 2 cut(s) 397, 458
BstMBI GATC 2 cut(s) 51, 71
BstMWI GCNNNNNNNGC 2 cut(s) 123, 188
BstSFI CTRYAG 1 cut(s) 67
BstX2I RGATCY 1 cut(s) 71
BstYI RGATCY 1 cut(s) 71
BsuRI GGCC 2 cut(s) 126, 182
BtsCI GGATG 1 cut(s) 223
BtsIMutI CAGTG 2 cut(s) 195, 327
Cfr10I RCCGGY 1 cut(s) 299
Cfr13I GGNCC 1 cut(s) 82
CspCI CAANNNNNGTGG 2 cut(s) 397, 432
CviJI RGCY 8 cut(s) 15, 126, 154, 182, 203, 364, 425, 443
CviKI_1 RGCY 8 cut(s) 15, 126, 154, 182, 203, 364, 425, 443
DdeI CTNAG 3 cut(s) 11, 198, 351
DpnI GATC 2 cut(s) 53, 73
DpnII GATC 2 cut(s) 51, 71
EaeI YGGCCR 1 cut(s) 180
Eco130I CCWWGG 2 cut(s) 16, 495
Eco31I GGTCTC 1 cut(s) 397
Eco47I GGWCC 1 cut(s) 82
Eco57I CTGAAG 1 cut(s) 405
EcoNI CCTNNNNNAGG 1 cut(s) 106
EcoT14I CCWWGG 2 cut(s) 16, 495
ErhI CCWWGG 2 cut(s) 16, 495
FaiI YATR 8 cut(s) 92, 119, 279, 289, 324, 374, 459, 461
FokI GGATG 1 cut(s) 230
HaeIII GGCC 2 cut(s) 126, 182
HapII CCGG 1 cut(s) 300
HinfI GANTC 1 cut(s) 112
HpaII CCGG 1 cut(s) 300
HphI GGTGA 1 cut(s) 173
Hpy166II GTNNAC 3 cut(s) 64, 305, 347
Hpy188I TCNGA 3 cut(s) 338, 403, 515
Hpy188III TCNNGA 1 cut(s) 109
Hpy8I GTNNAC 3 cut(s) 64, 305, 347
HpyAV CCTTC 3 cut(s) 116, 143, 349
HpyCH4III ACNGT 2 cut(s) 46, 68
HpyCH4V TGCA 2 cut(s) 140, 191
HpyF10VI GCNNNNNNNGC 2 cut(s) 123, 188
HpyF3I CTNAG 3 cut(s) 11, 198, 351
Kzo9I GATC 2 cut(s) 51, 71
LmnI GCTCC 1 cut(s) 422
LpnPI CCDG 3 cut(s) 94, 108, 313
MalI GATC 2 cut(s) 53, 73
MboI GATC 2 cut(s) 51, 71
MboII GAAGA 2 cut(s) 176, 460
MflI RGATCY 1 cut(s) 71
MluCI AATT 2 cut(s) 244, 257
MmeI TCCRAC 1 cut(s) 415
MnlI CCTC 6 cut(s) 17, 96, 193, 272, 284, 424
MroXI GAANNNNTTC 1 cut(s) 289
MspI CCGG 1 cut(s) 300
MwoI GCNNNNNNNGC 2 cut(s) 123, 188
NdeII GATC 2 cut(s) 51, 71
NlaIV GGNNCC 1 cut(s) 84
NspV TTCGAA 1 cut(s) 254
PdmI GAANNNNTTC 1 cut(s) 289
PfeI GAWTC 1 cut(s) 112
PsiI TTATAA 1 cut(s) 324
PspN4I GGNNCC 1 cut(s) 84
PspPI GGNCC 1 cut(s) 82
PsuI RGATCY 1 cut(s) 71
Sau3AI GATC 2 cut(s) 51, 71
Sau96I GGNCC 1 cut(s) 82
SetI ASST 9 cut(s) 38, 97, 104, 352, 360, 366, 427, 435, 501
SfcI CTRYAG 1 cut(s) 67
SfuI TTCGAA 1 cut(s) 254
SinI GGWCC 1 cut(s) 82
Sse9I AATT 2 cut(s) 244, 257
SsiI CCGC 2 cut(s) 134, 389
StyI CCWWGG 2 cut(s) 16, 495
TaaI ACNGT 2 cut(s) 46, 68
TaqI TCGA 3 cut(s) 254, 264, 293
TasI AATT 2 cut(s) 244, 257
TfiI GAWTC 1 cut(s) 112
TscAI CASTG 2 cut(s) 202, 334
TspRI CASTG 2 cut(s) 202, 334
VpaK11BI GGWCC 1 cut(s) 82
XagI CCTNNNNNAGG 1 cut(s) 106
XapI RAATTY 1 cut(s) 257
XmnI GAANNNNTTC 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.