Prupe.3G254400_v2.0.a1

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000138
Physical Location & Seq
Forward (+)
24340664 .. 24342062
1399 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G254400.1

Sequence Viewer

Length: 1131 bp
ATGGCACAACCAAGCTCAATCAAAGTAGTTGAGGTTTGCTGGGTAGCTCCCAAACCAAACTCACCAGACTCAGCCTCCCCAGATGATCAGTCTCTTCCTCCAACTTTCTTTGACCTTCTCTGGCTAAGGTTTCCTCCCATCCAACGTGTTTTCTTCTACGAAATATCTTCATTCAACACACCCCTCTTCCTCGATTCCATACTTCCAAAACTCAAAGCCTCACTCTCTCTCACCCTCCAGCACTTTCTGCCTCTTGCAGGAAACCTCACTTGGCCCCAAGACTCCCAAAAACCCTTTCTCAGTTATGTCAAAGGTGACACCCTTTCGCTTACAATAGCTGAATCTGATGCTGATTTCTACCATCTAGTTTCAACCAACAACTTCAATATTGAAGCCTCTTATACCCCAATTGGCATGTCTCATGACCAAGCCGCAGTGATGGCATTGCAAATCACAATTTTCCCCAACTGTGGTTTTTCCATTGGATCAGCCGTGCACCATGCTGCCCTTGATGGCAAAACTTCAACATCTTTTTTGAAACTATGGGCTCACCTGTGCAAACATGGAGGACTGCCCTCATCTTTGTTTCCAGAGCCACCAAAACCATGTTATGACAGGAGGGCCGTCAAGGACCCTGCCGGCATTGAAGCAATCTACTTGAAGGAATGCGCAGACTGCAGGTCTCGCTTAGACCCTCCTCTGCCTGCAACCTATTTTGGGAATTGCATCGCAGGCCGTGGAGTAGTTGCAGAAACAAAGGGCCTATTGGGAGAAGATGGGTTGTTTGTGGCCTTAAATGCAATTAGTGAATCTATAAAAAGTTTGGACAAGACCTTTTTGGATGGGGCAGAGACTTGGGTTTCAAGAATGCTCAATGCACTGCAGACTACAGATAGAGTTCATTCCATTTCTGGGTCACATACTTTTGGGATTTATGAGGCAACTGCTTTTGGATGGGGAAGACCAACGAAGATCGACTTTGTTTCGATAGACAGGACAGGGGCTATCTCCTTTTCAGATAGCAAGAATGGTGCTGGTGGTGCTGGTGGTGTTGAGGTTGGGCTGGTTTTGAAAAAACATTATATGGAGGCTTTTGCTTCTCTATTTGCGAGAAGTCTTGAAGACCTTTGA

Protein Analysis

377

Amino Acids

40.89

Weight (kDa)

5.8

Isoelectric Point (pI)

43.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 670
Acc36I ACCTGC 1 cut(s) 669
AciI CCGC 1 cut(s) 432
AclWI GGATC 1 cut(s) 493
AfiI CCNNNNNNNGG 4 cut(s) 257, 470, 717, 912
AflIII ACRYGT 1 cut(s) 145
AhdI GACNNNNNGTC 1 cut(s) 679
AjuI GAANNNNNNNTTGG 4 cut(s) 253, 279, 285, 311
AluBI AGCT 3 cut(s) 15, 47, 338
AluI AGCT 3 cut(s) 15, 47, 338
Alw21I GWGCWC 1 cut(s) 498
Alw26I GTCTC 4 cut(s) 96, 423, 687, 845
Alw44I GTGCAC 1 cut(s) 494
AlwI GGATC 1 cut(s) 493
AoxI GGCC 5 cut(s) 272, 621, 733, 760, 789
ApaLI GTGCAC 1 cut(s) 494
ApeKI GCWGC 1 cut(s) 503
AspLEI GCGC 1 cut(s) 671
AspS9I GGNCC 4 cut(s) 273, 621, 631, 760
AsuHPI GGTGA 4 cut(s) 54, 223, 326, 542
AvaII GGWCC 1 cut(s) 631
BaeGI GKGCMC 1 cut(s) 498
BanII GRGCYC 1 cut(s) 550
BbsI GAAGAC 1 cut(s) 967
Bbv12I GWGCWC 1 cut(s) 498
BbvI GCAGC 1 cut(s) 490
BccI CCATC 7 cut(s) 146, 369, 433, 506, 770, 836, 948
BceAI ACGGC 3 cut(s) 476, 608, 720
BclI TGATCA 1 cut(s) 85
BcoDI GTCTC 4 cut(s) 96, 423, 687, 845
BfaI CTAG 1 cut(s) 365
BfmI CTRYAG 3 cut(s) 676, 881, 888
BfuAI ACCTGC 1 cut(s) 669
BisI GCNGC 2 cut(s) 432, 504
BlsI GCNGC 2 cut(s) 433, 505
Bme18I GGWCC 1 cut(s) 631
BmeRI GACNNNNNGTC 1 cut(s) 679
BmgT120I GGNCC 4 cut(s) 273, 621, 631, 760
BmiI GGNNCC 2 cut(s) 275, 633
BmsI GCATC 2 cut(s) 337, 735
BpiI GAAGAC 1 cut(s) 967
BpmI CTGGAG 1 cut(s) 221
Bpu10I CCTNAGC 1 cut(s) 125
BsaI GGTCTC 1 cut(s) 687
BsaJI CCNNGG 1 cut(s) 736
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 4 cut(s) 257, 470, 717, 912
Bse118I RCCGGY 1 cut(s) 638
Bse3DI GCAATG 1 cut(s) 443
BseDI CCNNGG 1 cut(s) 736
BseGI GGATG 3 cut(s) 138, 847, 959
BseLI CCNNNNNNNGG 4 cut(s) 257, 470, 717, 912
BseMI GCAATG 1 cut(s) 443
BseMII CTCAG 2 cut(s) 84, 313
BseRI GAGGAG 1 cut(s) 687
BseSI GKGCMC 1 cut(s) 498
BseXI GCAGC 1 cut(s) 490
BseYI CCCAGC 1 cut(s) 39
BshFI GGCC 5 cut(s) 274, 623, 735, 762, 791
BsiHKAI GWGCWC 1 cut(s) 498
BsiSI CCGG 1 cut(s) 639
BslI CCNNNNNNNGG 4 cut(s) 257, 470, 717, 912
BsmAI GTCTC 4 cut(s) 96, 423, 687, 845
BsmI GAATGC 2 cut(s) 671, 873
BsnI GGCC 5 cut(s) 274, 623, 735, 762, 791
Bso31I GGTCTC 1 cut(s) 687
Bsp1286I GDGCHC 2 cut(s) 498, 550
Bsp143I GATC 3 cut(s) 85, 485, 972
BspACI CCGC 1 cut(s) 432
BspANI GGCC 5 cut(s) 274, 623, 735, 762, 791
BspCNI CTCAG 2 cut(s) 83, 312
BspHI TCATGA 1 cut(s) 421
BspLI GGNNCC 2 cut(s) 275, 633
BspMAI CTGCAG 2 cut(s) 680, 885
BspMI ACCTGC 1 cut(s) 669
BspPI GGATC 1 cut(s) 493
BspTNI GGTCTC 1 cut(s) 687
BsrDI GCAATG 1 cut(s) 443
BsrFI RCCGGY 1 cut(s) 638
BssAI RCCGGY 1 cut(s) 638
BssECI CCNNGG 1 cut(s) 736
BssMI GATC 3 cut(s) 85, 485, 972
Bst4CI ACNGT 1 cut(s) 470
Bst6I CTCTTC 2 cut(s) 99, 191
BstAPI GCANNNNNTGC 1 cut(s) 247
BstC8I GCNNGC 3 cut(s) 640, 705, 733
BstDEI CTNAG 4 cut(s) 70, 125, 299, 688
BstDSI CCRYGG 1 cut(s) 736
BstENI CCTNNNNNAGG 1 cut(s) 255
BstF5I GGATG 3 cut(s) 138, 847, 959
BstHHI GCGC 1 cut(s) 671
BstKTI GATC 3 cut(s) 88, 488, 975
BstMAI GTCTC 4 cut(s) 96, 423, 687, 845
BstMBI GATC 3 cut(s) 85, 485, 972
BstMWI GCNNNNNNNGC 7 cut(s) 247, 440, 675, 684, 732, 797, 1040
BstNSI RCATGY 1 cut(s) 418
BstSFI CTRYAG 3 cut(s) 676, 881, 888
BstSLI GKGCMC 1 cut(s) 498
BstV1I GCAGC 1 cut(s) 490
BstV2I GAAGAC 1 cut(s) 967
BsuRI GGCC 5 cut(s) 274, 623, 735, 762, 791
BtgI CCRYGG 1 cut(s) 736
BtgZI GCGATG 1 cut(s) 712
BtsCI GGATG 3 cut(s) 138, 847, 959
BtsI GCAGTG 2 cut(s) 441, 878
BtsIMutI CAGTG 2 cut(s) 441, 878
BveI ACCTGC 1 cut(s) 669
Cac8I GCNNGC 3 cut(s) 640, 705, 733
CciI TCATGA 1 cut(s) 421
CfoI GCGC 1 cut(s) 671
Cfr10I RCCGGY 1 cut(s) 638
Cfr13I GGNCC 4 cut(s) 273, 621, 631, 760
CviAII CATG 5 cut(s) 415, 422, 500, 563, 606
DdeI CTNAG 4 cut(s) 70, 125, 299, 688
DpnI GATC 3 cut(s) 87, 487, 974
DpnII GATC 3 cut(s) 85, 485, 972
DriI GACNNNNNGTC 1 cut(s) 679
Eam1104I CTCTTC 2 cut(s) 99, 191
Eam1105I GACNNNNNGTC 1 cut(s) 679
EarI CTCTTC 2 cut(s) 99, 191
Eco24I GRGCYC 1 cut(s) 550
Eco31I GGTCTC 1 cut(s) 687
Eco47I GGWCC 1 cut(s) 631
EcoNI CCTNNNNNAGG 1 cut(s) 255
EcoO109I RGGNCCY 2 cut(s) 631, 760
EcoT38I GRGCYC 1 cut(s) 550
FaeI CATG 5 cut(s) 418, 425, 503, 566, 609
FalI AAGNNNNNCTT 2 cut(s) 962, 994
FatI CATG 5 cut(s) 414, 421, 499, 562, 605
FbaI TGATCA 1 cut(s) 85
Fnu4HI GCNGC 2 cut(s) 432, 504
FokI GGATG 3 cut(s) 125, 854, 966
FriOI GRGCYC 1 cut(s) 550
Fsp4HI GCNGC 2 cut(s) 432, 504
FspBI CTAG 1 cut(s) 365
FspI TGCGCA 1 cut(s) 670
GlaI GCGC 1 cut(s) 670
GluI GCNGC 2 cut(s) 432, 504
GsaI CCCAGC 1 cut(s) 43
GsuI CTGGAG 1 cut(s) 221
HaeIII GGCC 5 cut(s) 274, 623, 735, 762, 791
HapII CCGG 1 cut(s) 639
HhaI GCGC 1 cut(s) 671
Hin1II CATG 5 cut(s) 418, 425, 503, 566, 609
Hin6I GCGC 1 cut(s) 669
HinP1I GCGC 1 cut(s) 669
HinfI GANTC 5 cut(s) 68, 194, 281, 341, 809
HpaII CCGG 1 cut(s) 639
HphI GGTGA 4 cut(s) 54, 223, 326, 542
Hpy166II GTNNAC 1 cut(s) 496
Hpy188I TCNGA 2 cut(s) 346, 1018
Hpy188III TCNNGA 4 cut(s) 422, 590, 864, 1118
Hpy8I GTNNAC 1 cut(s) 496
HpyAV CCTTC 2 cut(s) 125, 655
HpyCH4III ACNGT 1 cut(s) 470
HpyCH4IV ACGT 1 cut(s) 145
HpyF10VI GCNNNNNNNGC 7 cut(s) 247, 440, 675, 684, 732, 797, 1040
HpyF3I CTNAG 4 cut(s) 70, 125, 299, 688
HpySE526I ACGT 1 cut(s) 145
Hsp92II CATG 5 cut(s) 418, 425, 503, 566, 609
HspAI GCGC 1 cut(s) 669
KroI GCCGGC 1 cut(s) 638
KroNI GCCGGC 1 cut(s) 640
Ksp22I TGATCA 1 cut(s) 85
Kzo9I GATC 3 cut(s) 85, 485, 972
LmnI GCTCC 1 cut(s) 52
Lsp1109I GCAGC 1 cut(s) 490
LweI GCATC 2 cut(s) 337, 735
MaeI CTAG 1 cut(s) 365
MaeII ACGT 1 cut(s) 145
MaeIII GTNAC 2 cut(s) 314, 915
MalI GATC 3 cut(s) 87, 487, 974
MboI GATC 3 cut(s) 85, 485, 972
MboII GAAGA 7 cut(s) 86, 145, 159, 178, 785, 972, 982
MfeI CAATTG 1 cut(s) 408
MhlI GDGCHC 2 cut(s) 498, 550
MluCI AATT 4 cut(s) 408, 456, 721, 801
MlyI GAGTC 2 cut(s) 62, 275
MmeI TCCRAC 2 cut(s) 125, 166
MroNI GCCGGC 1 cut(s) 638
MseI TTAA 1 cut(s) 794
MspI CCGG 1 cut(s) 639
MunI CAATTG 1 cut(s) 408
Mva1269I GAATGC 2 cut(s) 671, 873
MwoI GCNNNNNNNGC 7 cut(s) 247, 440, 675, 684, 732, 797, 1040
NaeI GCCGGC 1 cut(s) 640
NdeII GATC 3 cut(s) 85, 485, 972
NgoMIV GCCGGC 1 cut(s) 638
NlaIII CATG 5 cut(s) 418, 425, 503, 566, 609
NlaIV GGNNCC 2 cut(s) 275, 633
NmuCI GTSAC 2 cut(s) 314, 915
NsbI TGCGCA 1 cut(s) 670
NspI RCATGY 1 cut(s) 418
PagI TCATGA 1 cut(s) 421
PctI GAATGC 2 cut(s) 671, 873
PdiI GCCGGC 1 cut(s) 640
PfeI GAWTC 3 cut(s) 194, 341, 809
PkrI GCNGC 2 cut(s) 433, 505
PleI GAGTC 2 cut(s) 62, 275
PpsI GAGTC 2 cut(s) 62, 275
PpuMI RGGWCCY 1 cut(s) 631
Psp5II RGGWCCY 1 cut(s) 631
PspFI CCCAGC 1 cut(s) 39
PspN4I GGNNCC 2 cut(s) 275, 633
PspPI GGNCC 4 cut(s) 273, 621, 631, 760
PspPPI RGGWCCY 1 cut(s) 631
PstI CTGCAG 2 cut(s) 680, 885
SaqAI TTAA 1 cut(s) 794
SatI GCNGC 2 cut(s) 432, 504
Sau3AI GATC 3 cut(s) 85, 485, 972
Sau96I GGNCC 4 cut(s) 273, 621, 631, 760
SchI GAGTC 2 cut(s) 62, 275
SduI GDGCHC 2 cut(s) 498, 550
SfaNI GCATC 2 cut(s) 337, 735
SfcI CTRYAG 3 cut(s) 676, 881, 888
SinI GGWCC 1 cut(s) 631
Sse9I AATT 4 cut(s) 408, 456, 721, 801
SsiI CCGC 1 cut(s) 432
SspI AATATT 1 cut(s) 388
SspMI CTAG 1 cut(s) 365
TaaI ACNGT 1 cut(s) 470
TaiI ACGT 1 cut(s) 148
TaqI TCGA 3 cut(s) 192, 975, 986
TasI AATT 4 cut(s) 408, 456, 721, 801
TauI GCSGC 1 cut(s) 434
TfiI GAWTC 3 cut(s) 194, 341, 809
Tru1I TTAA 1 cut(s) 794
Tru9I TTAA 1 cut(s) 794
TscAI CASTG 2 cut(s) 441, 885
TseFI GTSAC 2 cut(s) 314, 915
TseI GCWGC 1 cut(s) 503
Tsp45I GTSAC 2 cut(s) 314, 915
TspDTI ATGAA 2 cut(s) 159, 890
TspRI CASTG 2 cut(s) 441, 885
VneI GTGCAC 1 cut(s) 494
VpaK11BI GGWCC 1 cut(s) 631
XagI CCTNNNNNAGG 1 cut(s) 255
XceI RCATGY 1 cut(s) 418
XspI CTAG 1 cut(s) 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.