MD09G1060700.v1.1

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000138
Physical Location & Seq
Forward (+)
4137489 .. 4138178
690 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1060700.v1.1.491

Sequence Viewer

Length: 690 bp
ATGGCGTTTCAAATCACCATCTTTCCCAACAGCGGGGGCTTTTCCGTTGGAATATCCATGCACCATGCAGTTGTTGACGGCAAGACTCTCTTTATGTTTTTGAAATCTTGGACCCACATGTGCAAACACGTTCATCAATCCGATGACATTTTTTTCCCTGACCAGCTCAAATCGTTTTACGACCGAAGGGGTGTCAAAGACCCCTTCTGTCTCCAACTGGAAGATATTTACTCGAACCAGTTTCTGAACATGGACAGACGTCAAAATAATCGAAGTATGATGGTTGCAGCTCGCTATAAATCGCTAGTGATATCAGATTCAACTCGAGGCAACTTCGAATTCACGAGCGCAAAGATACAAGCTTTACGGAAATGGGTCATGACTAGAATGGAAGAGACCACCGGGAAACAAGAAGAGGGACATGATCGATCTGTTCATTTGTCAACGTTTTCTCTAACGTGCGCCTGGGTTTGCTTACCAAAAGCAGAGCAGGAAGAAGTAAAAGGGGGCATAATATCTATGTCATTTAGCGTGGACTGCCGGTCGCGCTTAACTCCTCCTTTACCTGCAAACTATTTTGGAAACTGCGTAACGGGCTGTCTAGCACCTGCAGAAAGAAAAGGACTTCTGGGAGAAGACGGATGGGTTGTAGCGGTAAATGCGATCACCGAAAACATTAAAGGGTTGTAA

Protein Analysis

230

Amino Acids

25.88

Weight (kDa)

8.15

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 1 - 213 2.9e-19 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 616
AatII GACGTC 1 cut(s) 262
Acc36I ACCTGC 2 cut(s) 574, 616
AccII CGCG 1 cut(s) 547
AciI CCGC 2 cut(s) 33, 653
AclI AACGTT 1 cut(s) 446
AcsI RAATTY 1 cut(s) 338
AcyI GRCGYC 1 cut(s) 259
AfiI CCNNNNNNNGG 2 cut(s) 32, 33
AflIII ACRYGT 2 cut(s) 117, 127
AgsI TTSAA 3 cut(s) 11, 103, 321
AhdI GACNNNNNGTC 1 cut(s) 541
AjnI CCWGG 1 cut(s) 464
AluBI AGCT 3 cut(s) 166, 290, 362
AluI AGCT 3 cut(s) 166, 290, 362
Alw26I GTCTC 2 cut(s) 215, 389
AlwNI CAGNNNCTG 1 cut(s) 244
Ama87I CYCGRG 1 cut(s) 324
ApeKI GCWGC 1 cut(s) 287
ApoI RAATTY 1 cut(s) 338
AspLEI GCGC 3 cut(s) 350, 464, 549
AspS9I GGNCC 1 cut(s) 111
AsuC2I CCSGG 1 cut(s) 403
AsuHPI GGTGA 2 cut(s) 7, 658
AsuII TTCGAA 1 cut(s) 336
AvaI CYCGRG 1 cut(s) 324
AvaII GGWCC 1 cut(s) 111
BauI CACGAG 1 cut(s) 343
BbsI GAAGAC 1 cut(s) 642
BbvI GCAGC 1 cut(s) 299
BccI CCATC 3 cut(s) 26, 274, 636
BceAI ACGGC 1 cut(s) 94
BciT130I CCWGG 1 cut(s) 466
BcnI CCSGG 1 cut(s) 403
BcoDI GTCTC 2 cut(s) 215, 389
BfaI CTAG 3 cut(s) 305, 384, 602
BfmI CTRYAG 1 cut(s) 609
BfuAI ACCTGC 2 cut(s) 574, 616
BisI GCNGC 1 cut(s) 288
BlsI GCNGC 1 cut(s) 289
Bme1390I CCNGG 2 cut(s) 403, 466
Bme18I GGWCC 1 cut(s) 111
BmeRI GACNNNNNGTC 1 cut(s) 541
BmeT110I CYCGRG 1 cut(s) 324
BmgT120I GGNCC 1 cut(s) 111
BmiI GGNNCC 1 cut(s) 113
BmrFI CCNGG 2 cut(s) 403, 466
BoxI GACNNNNGTC 1 cut(s) 258
BpiI GAAGAC 1 cut(s) 642
Bpu14I TTCGAA 1 cut(s) 336
BpuMI CCSGG 1 cut(s) 403
Bsa29I ATCGAT 1 cut(s) 427
BsaHI GRCGYC 1 cut(s) 259
BsaI GGTCTC 1 cut(s) 389
BsaJI CCNNGG 1 cut(s) 465
Bsc4I CCNNNNNNNGG 2 cut(s) 32, 33
Bse118I RCCGGY 1 cut(s) 540
Bse1I ACTGG 2 cut(s) 222, 238
BseBI CCWGG 1 cut(s) 466
BseCI ATCGAT 1 cut(s) 427
BseDI CCNNGG 1 cut(s) 465
BseGI GGATG 1 cut(s) 647
BseLI CCNNNNNNNGG 2 cut(s) 32, 33
BseNI ACTGG 2 cut(s) 222, 238
BseRI GAGGAG 1 cut(s) 546
BseXI GCAGC 1 cut(s) 299
Bsh1236I CGCG 1 cut(s) 547
Bsh1285I CGRYCG 2 cut(s) 184, 545
BshVI ATCGAT 1 cut(s) 427
BsiEI CGRYCG 2 cut(s) 184, 545
BsiHKCI CYCGRG 1 cut(s) 324
BsiSI CCGG 2 cut(s) 402, 541
BslFI GGGAC 1 cut(s) 432
BslI CCNNNNNNNGG 2 cut(s) 32, 33
BsmAI GTCTC 2 cut(s) 215, 389
BsmFI GGGAC 1 cut(s) 432
Bso31I GGTCTC 1 cut(s) 389
BsoBI CYCGRG 1 cut(s) 324
Bsp119I TTCGAA 1 cut(s) 336
Bsp143I GATC 3 cut(s) 424, 428, 663
BspACI CCGC 2 cut(s) 33, 653
BspDI ATCGAT 1 cut(s) 427
BspFNI CGCG 1 cut(s) 547
BspHI TCATGA 1 cut(s) 378
BspLI GGNNCC 1 cut(s) 113
BspMAI CTGCAG 1 cut(s) 613
BspMI ACCTGC 2 cut(s) 574, 616
BspT104I TTCGAA 1 cut(s) 336
BspTNI GGTCTC 1 cut(s) 389
BsrFI RCCGGY 1 cut(s) 540
BsrI ACTGG 2 cut(s) 222, 238
BssAI RCCGGY 1 cut(s) 540
BssECI CCNNGG 1 cut(s) 465
BssMI GATC 3 cut(s) 424, 428, 663
BssNI GRCGYC 1 cut(s) 259
BssSI CACGAG 1 cut(s) 343
Bst2BI CACGAG 1 cut(s) 343
Bst2UI CCWGG 1 cut(s) 466
Bst6I CTCTTC 2 cut(s) 387, 408
BstACI GRCGYC 1 cut(s) 259
BstBI TTCGAA 1 cut(s) 336
BstC8I GCNNGC 1 cut(s) 292
BstF5I GGATG 1 cut(s) 647
BstFNI CGCG 1 cut(s) 547
BstHHI GCGC 3 cut(s) 350, 464, 549
BstKTI GATC 3 cut(s) 427, 431, 666
BstMAI GTCTC 2 cut(s) 215, 389
BstMBI GATC 3 cut(s) 424, 428, 663
BstMCI CGRYCG 2 cut(s) 184, 545
BstMWI GCNNNNNNNGC 4 cut(s) 537, 546, 594, 659
BstNI CCWGG 1 cut(s) 466
BstNSI RCATGY 1 cut(s) 121
BstPAI GACNNNNGTC 1 cut(s) 258
BstSCI CCNGG 2 cut(s) 401, 464
BstSFI CTRYAG 1 cut(s) 609
BstUI CGCG 1 cut(s) 547
BstV1I GCAGC 1 cut(s) 299
BstV2I GAAGAC 1 cut(s) 642
Bsu15I ATCGAT 1 cut(s) 427
BsuTUI ATCGAT 1 cut(s) 427
BtsCI GGATG 1 cut(s) 647
BveI ACCTGC 2 cut(s) 574, 616
Cac8I GCNNGC 1 cut(s) 292
CaiI CAGNNNCTG 1 cut(s) 244
CciI TCATGA 1 cut(s) 378
CfoI GCGC 3 cut(s) 350, 464, 549
Cfr10I RCCGGY 1 cut(s) 540
Cfr13I GGNCC 1 cut(s) 111
ClaI ATCGAT 1 cut(s) 427
CviAII CATG 6 cut(s) 58, 65, 118, 250, 379, 422
CviJI RGCY 5 cut(s) 39, 166, 290, 362, 597
CviKI_1 RGCY 5 cut(s) 39, 166, 290, 362, 597
DpnI GATC 3 cut(s) 426, 430, 665
DpnII GATC 3 cut(s) 424, 428, 663
DriI GACNNNNNGTC 1 cut(s) 541
Eam1104I CTCTTC 2 cut(s) 387, 408
Eam1105I GACNNNNNGTC 1 cut(s) 541
EarI CTCTTC 2 cut(s) 387, 408
Eco31I GGTCTC 1 cut(s) 389
Eco32I GATATC 1 cut(s) 312
Eco47I GGWCC 1 cut(s) 111
Eco88I CYCGRG 1 cut(s) 324
EcoRI GAATTC 1 cut(s) 338
EcoRII CCWGG 1 cut(s) 464
EcoRV GATATC 1 cut(s) 312
FaeI CATG 6 cut(s) 61, 68, 121, 253, 382, 425
FalI AAGNNNNNCTT 2 cut(s) 74, 106
FaqI GGGAC 1 cut(s) 432
FatI CATG 6 cut(s) 57, 64, 117, 249, 378, 421
FauI CCCGC 1 cut(s) 26
Fnu4HI GCNGC 1 cut(s) 288
FokI GGATG 1 cut(s) 654
Fsp4HI GCNGC 1 cut(s) 288
FspBI CTAG 3 cut(s) 305, 384, 602
GlaI GCGC 3 cut(s) 349, 463, 548
GluI GCNGC 1 cut(s) 288
HapII CCGG 2 cut(s) 402, 541
HhaI GCGC 3 cut(s) 350, 464, 549
Hin1I GRCGYC 1 cut(s) 259
Hin1II CATG 6 cut(s) 61, 68, 121, 253, 382, 425
Hin6I GCGC 3 cut(s) 348, 462, 547
HinP1I GCGC 3 cut(s) 348, 462, 547
HincII GTYRAC 2 cut(s) 76, 444
HindII GTYRAC 2 cut(s) 76, 444
HindIII AAGCTT 1 cut(s) 360
HinfI GANTC 2 cut(s) 85, 317
HpaII CCGG 2 cut(s) 402, 541
HphI GGTGA 2 cut(s) 7, 658
Hpy166II GTNNAC 3 cut(s) 76, 444, 535
Hpy188I TCNGA 3 cut(s) 142, 246, 316
Hpy188III TCNNGA 2 cut(s) 343, 379
Hpy8I GTNNAC 3 cut(s) 76, 444, 535
HpyAV CCTTC 2 cut(s) 180, 214
HpyCH4IV ACGT 4 cut(s) 129, 259, 446, 458
HpyCH4V TGCA 6 cut(s) 61, 68, 123, 287, 569, 611
HpyF10VI GCNNNNNNNGC 4 cut(s) 537, 546, 594, 659
HpySE526I ACGT 4 cut(s) 129, 259, 446, 458
Hsp92I GRCGYC 1 cut(s) 259
Hsp92II CATG 6 cut(s) 61, 68, 121, 253, 382, 425
HspAI GCGC 3 cut(s) 348, 462, 547
Kzo9I GATC 3 cut(s) 424, 428, 663
Lsp1109I GCAGC 1 cut(s) 299
MaeI CTAG 3 cut(s) 305, 384, 602
MaeII ACGT 4 cut(s) 129, 259, 446, 458
MaeIII GTNAC 1 cut(s) 589
MalI GATC 3 cut(s) 426, 430, 665
MboI GATC 3 cut(s) 424, 428, 663
MboII GAAGA 5 cut(s) 233, 404, 425, 506, 647
MluCI AATT 1 cut(s) 338
MlyI GAGTC 1 cut(s) 79
MmeI TCCRAC 2 cut(s) 28, 238
MnlI CCTC 3 cut(s) 320, 409, 567
MseI TTAA 2 cut(s) 551, 678
MspA1I CMGCKG 1 cut(s) 33
MspI CCGG 2 cut(s) 402, 541
MspR9I CCNGG 2 cut(s) 403, 466
MvaI CCWGG 1 cut(s) 466
MvnI CGCG 1 cut(s) 547
MwoI GCNNNNNNNGC 4 cut(s) 537, 546, 594, 659
NciI CCSGG 1 cut(s) 403
NdeII GATC 3 cut(s) 424, 428, 663
NlaIII CATG 6 cut(s) 61, 68, 121, 253, 382, 425
NlaIV GGNNCC 1 cut(s) 113
NspI RCATGY 1 cut(s) 121
NspV TTCGAA 1 cut(s) 336
PaeR7I CTCGAG 1 cut(s) 324
PagI TCATGA 1 cut(s) 378
PaqCI CACCTGC 1 cut(s) 616
PciI ACATGT 1 cut(s) 117
PfeI GAWTC 1 cut(s) 317
PkrI GCNGC 1 cut(s) 289
PleI GAGTC 1 cut(s) 79
PpsI GAGTC 1 cut(s) 79
PscI ACATGT 1 cut(s) 117
PshAI GACNNNNGTC 1 cut(s) 258
Psp1406I AACGTT 1 cut(s) 446
Psp6I CCWGG 1 cut(s) 464
PspGI CCWGG 1 cut(s) 464
PspN4I GGNNCC 1 cut(s) 113
PspPI GGNCC 1 cut(s) 111
PspXI VCTCGAGB 1 cut(s) 324
PstI CTGCAG 1 cut(s) 613
PstNI CAGNNNCTG 1 cut(s) 244
SaqAI TTAA 2 cut(s) 551, 678
SatI GCNGC 1 cut(s) 288
Sau3AI GATC 3 cut(s) 424, 428, 663
Sau96I GGNCC 1 cut(s) 111
SchI GAGTC 1 cut(s) 79
ScrFI CCNGG 2 cut(s) 403, 466
SetI ASST 9 cut(s) 132, 168, 262, 292, 364, 449, 461, 568, 610
SfcI CTRYAG 1 cut(s) 609
Sfr274I CTCGAG 1 cut(s) 324
SfuI TTCGAA 1 cut(s) 336
SinI GGWCC 1 cut(s) 111
SlaI CTCGAG 1 cut(s) 324
SmlI CTYRAG 1 cut(s) 324
SmoI CTYRAG 1 cut(s) 324
Sse9I AATT 1 cut(s) 338
SsiI CCGC 2 cut(s) 33, 653
SspMI CTAG 3 cut(s) 305, 384, 602
StyD4I CCNGG 2 cut(s) 401, 464
TaiI ACGT 4 cut(s) 132, 262, 449, 461
TaqI TCGA 5 cut(s) 233, 271, 325, 336, 427
TaqII GACCGA 1 cut(s) 198
TasI AATT 1 cut(s) 338
TfiI GAWTC 1 cut(s) 317
Tru1I TTAA 2 cut(s) 551, 678
Tru9I TTAA 2 cut(s) 551, 678
TseI GCWGC 1 cut(s) 287
TspDTI ATGAA 2 cut(s) 122, 425
TspGWI ACGGA 3 cut(s) 34, 382, 654
VpaK11BI GGWCC 1 cut(s) 111
XapI RAATTY 1 cut(s) 338
XceI RCATGY 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 324
XspI CTAG 3 cut(s) 305, 384, 602
ZraI GACGTC 1 cut(s) 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.