FvH4_7g01410

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000138
Physical Location & Seq
Forward (+)
1810361 .. 1812343
1983 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g01410.t1

Sequence Viewer

Length: 903 bp
ATGCACCATGCCATCCTTGACGGCAAAACATCAATCTCGTTTGTTAAGTCGTGGGCTCATGCATGCAGCAAACAAGTCGAAAATGGCGTATCCGATATTGGATCAGATGTCTCGTTACCGGAGAAGTTGAAGCCGTTATATGACAGAACGGTCATCCATAACCCGACCGGGCTCGGACTCGAATCCATCTACTTGAAGGAATGGCAAAACATGGATGGCCCCAACAACAGAAGCCTAAAGATTTGGGAGTTGAAAGCTCCACCAGATGACTCAGTTCGAGGCATCTTTGAGTTCACTCGCGGACATATACAAACCCTAAGGCAGATGGTAGTTGAAAAAGTTTCTGATCTTCATTTGTCAACGTTTTCTTTAGTGTGTGCTTATACTTGGGTTTGTTTAGTCAAGGCACAAGAAGTAGACGCCGGAAAAACTTCATATCAGGTATTTAGTGTGGACTGTAGGTCTCGCTTGGACCCTCCGGTACCGGAAAACTATTTCGGGAACTGCACGAGGGGTGTGCCGGTGTTTGCAGAGGCAAATGAGTTATTGGGTGAAGATGGGTTGGTCGTGGCGGTCACAGCAATTAGTGAAGCTATAAAGGGTTTGGACAAGAATGGGGTTTTGAAGGGGGCCGACGAGGTTTACGTTTCGAAAGTCAAGGACTATTTTGGGGTTGAGGGATTCTATTCTACTGCTGGTTCTCACCGATTTCAGATATATGATACCGACTTCGGATGGGGTAGGCCGACGAAAGTTGAGGTGGTTTCTATAGATAGGACCGGAGCATTTTCAGTGTCGGATTCCAAGAATGGTGGTGGAGGTGTAGAGGTCGGGGTGGTTCTGAAGAAACATGTTATGGAGGCTTTTGCTTCTCTATTTGCTAAAGGTTTTGGAAAACACTGA

Protein Analysis

301

Amino Acids

32.9

Weight (kDa)

6.15

Isoelectric Point (pI)

22.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 1 - 291 2.1e-31 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 149
Acc65I GGTACC 1 cut(s) 481
AccB1I GGYRCC 1 cut(s) 481
AccI GTMKAC 1 cut(s) 417
AccII CGCG 1 cut(s) 300
AciI CCGC 2 cut(s) 300, 572
AclI AACGTT 1 cut(s) 362
AclWI GGATC 1 cut(s) 109
AcuI CTGAAG 1 cut(s) 863
AcyI GRCGYC 1 cut(s) 420
AfaI GTAC 1 cut(s) 483
AflIII ACRYGT 1 cut(s) 850
AgsI TTSAA 5 cut(s) 130, 196, 253, 335, 625
AhdI GACNNNNNGTC 1 cut(s) 460
AluBI AGCT 2 cut(s) 257, 593
AluI AGCT 2 cut(s) 257, 593
Alw26I GTCTC 2 cut(s) 115, 468
AlwI GGATC 1 cut(s) 109
AoxI GGCC 3 cut(s) 217, 630, 743
ApeKI GCWGC 1 cut(s) 66
Asp700I GAANNNNTTC 1 cut(s) 430
Asp718I GGTACC 1 cut(s) 481
AspS9I GGNCC 4 cut(s) 218, 472, 630, 777
AsuC2I CCSGG 1 cut(s) 169
AsuHPI GGTGA 2 cut(s) 563, 695
AsuII TTCGAA 1 cut(s) 650
AvaII GGWCC 2 cut(s) 472, 777
AxyI CCTNAGG 1 cut(s) 317
BanI GGYRCC 1 cut(s) 481
BanII GRGCYC 2 cut(s) 58, 174
BauI CACGAG 1 cut(s) 508
BbvI GCAGC 1 cut(s) 78
BccI CCATC 6 cut(s) 20, 194, 209, 319, 551, 729
BceAI ACGGC 2 cut(s) 37, 118
BcgI CGANNNNNNTGC 4 cut(s) 58, 92, 499, 533
BciVI GTATCC 1 cut(s) 100
BcnI CCSGG 1 cut(s) 169
BcoDI GTCTC 2 cut(s) 115, 468
BfmI CTRYAG 2 cut(s) 457, 768
BfuI GTATCC 1 cut(s) 100
BisI GCNGC 1 cut(s) 67
BlsI GCNGC 1 cut(s) 68
Bme1390I CCNGG 1 cut(s) 169
Bme18I GGWCC 2 cut(s) 472, 777
BmeRI GACNNNNNGTC 1 cut(s) 460
BmgT120I GGNCC 4 cut(s) 218, 472, 630, 777
BmiI GGNNCC 4 cut(s) 220, 474, 483, 631
BmrFI CCNGG 1 cut(s) 169
BmsI GCATC 1 cut(s) 291
Bpu14I TTCGAA 1 cut(s) 650
BpuMI CCSGG 1 cut(s) 169
BsaHI GRCGYC 1 cut(s) 420
BsaI GGTCTC 1 cut(s) 468
BsaWI WCCGGW 4 cut(s) 118, 478, 484, 779
Bse118I RCCGGY 1 cut(s) 520
Bse21I CCTNAGG 1 cut(s) 317
BseGI GGATG 4 cut(s) 12, 153, 220, 740
BseMII CTCAG 1 cut(s) 285
BseXI GCAGC 1 cut(s) 78
BsgI GTGCAG 1 cut(s) 490
Bsh1236I CGCG 1 cut(s) 300
Bsh1285I CGRYCG 1 cut(s) 168
BshFI GGCC 3 cut(s) 219, 632, 745
BshNI GGYRCC 1 cut(s) 481
BsiEI CGRYCG 1 cut(s) 168
BsiSI CCGG 7 cut(s) 119, 168, 423, 479, 485, 521, 780
BsmAI GTCTC 2 cut(s) 115, 468
BsnI GGCC 3 cut(s) 219, 632, 745
Bso31I GGTCTC 1 cut(s) 468
Bsp119I TTCGAA 1 cut(s) 650
Bsp1286I GDGCHC 2 cut(s) 58, 174
Bsp143I GATC 2 cut(s) 101, 346
BspACI CCGC 2 cut(s) 300, 572
BspANI GGCC 3 cut(s) 219, 632, 745
BspCNI CTCAG 1 cut(s) 284
BspFNI CGCG 1 cut(s) 300
BspLI GGNNCC 4 cut(s) 220, 474, 483, 631
BspPI GGATC 1 cut(s) 109
BspT104I TTCGAA 1 cut(s) 650
BspT107I GGYRCC 1 cut(s) 481
BspTNI GGTCTC 1 cut(s) 468
BsrFI RCCGGY 1 cut(s) 520
BssAI RCCGGY 1 cut(s) 520
BssMI GATC 2 cut(s) 101, 346
BssNI GRCGYC 1 cut(s) 420
BssSI CACGAG 1 cut(s) 508
Bst2BI CACGAG 1 cut(s) 508
Bst4CI ACNGT 2 cut(s) 151, 458
BstACI GRCGYC 1 cut(s) 420
BstBI TTCGAA 1 cut(s) 650
BstC8I GCNNGC 1 cut(s) 64
BstDEI CTNAG 2 cut(s) 271, 317
BstF5I GGATG 4 cut(s) 12, 153, 220, 740
BstFNI CGCG 1 cut(s) 300
BstKTI GATC 2 cut(s) 104, 349
BstMAI GTCTC 2 cut(s) 115, 468
BstMBI GATC 2 cut(s) 101, 346
BstMCI CGRYCG 1 cut(s) 168
BstMWI GCNNNNNNNGC 1 cut(s) 578
BstNSI RCATGY 2 cut(s) 66, 854
BstSCI CCNGG 1 cut(s) 167
BstSFI CTRYAG 2 cut(s) 457, 768
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 1 cut(s) 78
Bsu36I CCTNAGG 1 cut(s) 317
BsuI GTATCC 1 cut(s) 100
BsuRI GGCC 3 cut(s) 219, 632, 745
BtsCI GGATG 4 cut(s) 12, 153, 220, 740
BtsIMutI CAGTG 2 cut(s) 798, 898
Cac8I GCNNGC 1 cut(s) 64
Cfr10I RCCGGY 1 cut(s) 520
Cfr13I GGNCC 4 cut(s) 218, 472, 630, 777
CseI GACGC 1 cut(s) 428
Csp6I GTAC 1 cut(s) 482
CspCI CAANNNNNGTGG 2 cut(s) 793, 828
CviAII CATG 5 cut(s) 8, 59, 63, 211, 851
CviQI GTAC 1 cut(s) 482
DdeI CTNAG 2 cut(s) 271, 317
DpnI GATC 2 cut(s) 103, 348
DpnII GATC 2 cut(s) 101, 346
DrdI GACNNNNNNGTC 1 cut(s) 149
DriI GACNNNNNGTC 1 cut(s) 460
DseDI GACNNNNNNGTC 1 cut(s) 149
Eam1105I GACNNNNNGTC 1 cut(s) 460
Eco24I GRGCYC 2 cut(s) 58, 174
Eco31I GGTCTC 1 cut(s) 468
Eco47I GGWCC 2 cut(s) 472, 777
Eco57I CTGAAG 1 cut(s) 863
Eco81I CCTNAGG 1 cut(s) 317
EcoT22I ATGCAT 1 cut(s) 64
EcoT38I GRGCYC 2 cut(s) 58, 174
FaeI CATG 5 cut(s) 11, 62, 66, 214, 854
FatI CATG 5 cut(s) 7, 58, 62, 210, 850
FblI GTMKAC 1 cut(s) 417
Fnu4HI GCNGC 1 cut(s) 67
FokI GGATG 3 cut(s) 140, 227, 747
FriOI GRGCYC 2 cut(s) 58, 174
Fsp4HI GCNGC 1 cut(s) 67
GluI GCNGC 1 cut(s) 67
HaeIII GGCC 3 cut(s) 219, 632, 745
HapII CCGG 7 cut(s) 119, 168, 423, 479, 485, 521, 780
HgaI GACGC 1 cut(s) 428
Hin1I GRCGYC 1 cut(s) 420
Hin1II CATG 5 cut(s) 11, 62, 66, 214, 854
HincII GTYRAC 1 cut(s) 360
HindII GTYRAC 1 cut(s) 360
HinfI GANTC 5 cut(s) 177, 182, 269, 681, 800
HpaII CCGG 7 cut(s) 119, 168, 423, 479, 485, 521, 780
HphI GGTGA 2 cut(s) 563, 695
Hpy166II GTNNAC 5 cut(s) 294, 360, 418, 454, 643
Hpy188I TCNGA 8 cut(s) 94, 106, 176, 346, 714, 734, 799, 843
Hpy188III TCNNGA 1 cut(s) 499
Hpy8I GTNNAC 5 cut(s) 294, 360, 418, 454, 643
Hpy99I CGWCG 2 cut(s) 638, 751
HpyAV CCTTC 2 cut(s) 190, 619
HpyCH4III ACNGT 2 cut(s) 151, 458
HpyCH4IV ACGT 2 cut(s) 362, 645
HpyCH4V TGCA 5 cut(s) 4, 62, 66, 507, 530
HpyF10VI GCNNNNNNNGC 1 cut(s) 578
HpyF3I CTNAG 2 cut(s) 271, 317
HpySE526I ACGT 2 cut(s) 362, 645
Hsp92I GRCGYC 1 cut(s) 420
Hsp92II CATG 5 cut(s) 11, 62, 66, 214, 854
KpnI GGTACC 1 cut(s) 485
Kzo9I GATC 2 cut(s) 101, 346
LmnI GCTCC 2 cut(s) 262, 782
Lsp1109I GCAGC 1 cut(s) 78
LweI GCATC 1 cut(s) 291
MaeII ACGT 2 cut(s) 362, 645
MaeIII GTNAC 2 cut(s) 114, 574
MalI GATC 2 cut(s) 103, 348
MboI GATC 2 cut(s) 101, 346
MboII GAAGA 3 cut(s) 341, 566, 856
MhlI GDGCHC 2 cut(s) 58, 174
MluCI AATT 1 cut(s) 582
MlyI GAGTC 2 cut(s) 171, 263
MmeI TCCRAC 1 cut(s) 777
Mph1103I ATGCAT 1 cut(s) 64
MroXI GAANNNNTTC 1 cut(s) 430
MseI TTAA 1 cut(s) 45
MspI CCGG 7 cut(s) 119, 168, 423, 479, 485, 521, 780
MspR9I CCNGG 1 cut(s) 169
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 1 cut(s) 578
NciI CCSGG 1 cut(s) 169
NdeII GATC 2 cut(s) 101, 346
NlaIII CATG 5 cut(s) 11, 62, 66, 214, 854
NlaIV GGNNCC 4 cut(s) 220, 474, 483, 631
NmuCI GTSAC 1 cut(s) 574
NsiI ATGCAT 1 cut(s) 64
NspI RCATGY 2 cut(s) 66, 854
NspV TTCGAA 1 cut(s) 650
PaeI GCATGC 1 cut(s) 66
PciI ACATGT 1 cut(s) 850
PcsI WCGNNNNNNNCGW 2 cut(s) 84, 642
PdmI GAANNNNTTC 1 cut(s) 430
PfeI GAWTC 3 cut(s) 182, 681, 800
PkrI GCNGC 1 cut(s) 68
PleI GAGTC 2 cut(s) 171, 263
PpsI GAGTC 2 cut(s) 171, 263
PscI ACATGT 1 cut(s) 850
Psp1406I AACGTT 1 cut(s) 362
PspN4I GGNNCC 4 cut(s) 220, 474, 483, 631
PspPI GGNCC 4 cut(s) 218, 472, 630, 777
RsaI GTAC 1 cut(s) 483
RsaNI GTAC 1 cut(s) 482
SaqAI TTAA 1 cut(s) 45
SatI GCNGC 1 cut(s) 67
Sau3AI GATC 2 cut(s) 101, 346
Sau96I GGNCC 4 cut(s) 218, 472, 630, 777
SchI GAGTC 2 cut(s) 171, 263
ScrFI CCNGG 1 cut(s) 169
SduI GDGCHC 2 cut(s) 58, 174
SfaNI GCATC 1 cut(s) 291
SfcI CTRYAG 2 cut(s) 457, 768
SfuI TTCGAA 1 cut(s) 650
SinI GGWCC 2 cut(s) 472, 777
SphI GCATGC 1 cut(s) 66
Sse9I AATT 1 cut(s) 582
SsiI CCGC 2 cut(s) 300, 572
StyD4I CCNGG 1 cut(s) 167
TaaI ACNGT 2 cut(s) 151, 458
TaiI ACGT 2 cut(s) 365, 648
TaqI TCGA 4 cut(s) 78, 180, 277, 650
TasI AATT 1 cut(s) 582
TfiI GAWTC 3 cut(s) 182, 681, 800
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TscAI CASTG 1 cut(s) 798
TseFI GTSAC 1 cut(s) 574
TseI GCWGC 1 cut(s) 66
Tsp45I GTSAC 1 cut(s) 574
TspDTI ATGAA 2 cut(s) 341, 423
TspRI CASTG 1 cut(s) 798
VpaK11BI GGWCC 2 cut(s) 472, 777
XceI RCATGY 2 cut(s) 66, 854
XmiI GTMKAC 1 cut(s) 417
XmnI GAANNNNTTC 1 cut(s) 430
Zsp2I ATGCAT 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.