Rroxscaffold_4G00330570

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
64288699 .. 64289629
931 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00330570.1

Sequence Viewer

Length: 507 bp
ATGCACCATGCGATCCTCGATGGCAAAACATCAATCTCTTTCGTTAAGTCATGGGCTCATGTATGCAGCGAACATATTGAAAGTGACTTGTCCATTGGATCAGATATTTCATTACCAGAGCTGCTCAAGCCATTATATGATATTATGATAGAACGGTCTCGCTTGGACCCTCCGGTACCTGAAAACTATTTTGGGAACTGCATGATGCCTGTGATGGTGTTTGCGGAAGCAAAGGAATTATTGGGTGAAGATGGGTTGGTTGTGGCGGTCACAGCAATTAGCGAAACTATAAAGGGTTTGGACAAGAATGGGGTTTTGAAAAGAGCCCACACGAGGCCGAAAAAAGTTGAGGTGGTTTCTATAGATAGGACCGGAGCGATTTTAGTCTCGGATTCCAAGAATGGTGGTGGAGGTATAGAGATTGGGGTGGTTTTGAAAAAAGATTGTATGGAAGCATTTGCTTCTCTAATTGCTGTTGGTTTTGGAAAGCACCGAATCAGGGGTTGA

Protein Analysis

168

Amino Acids

18.18

Weight (kDa)

6.3

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 51 - 104 2.7e-06 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 175
AccB1I GGYRCC 1 cut(s) 175
AciI CCGC 2 cut(s) 224, 266
AclWI GGATC 2 cut(s) 7, 106
AfaI GTAC 1 cut(s) 177
AfiI CCNNNNNNNGG 2 cut(s) 333, 499
AgsI TTSAA 3 cut(s) 80, 319, 436
AjuI GAANNNNNNNTTGG 2 cut(s) 174, 206
AluBI AGCT 1 cut(s) 121
AluI AGCT 1 cut(s) 121
Alw26I GTCTC 2 cut(s) 162, 391
AlwI GGATC 2 cut(s) 7, 106
AoxI GGCC 1 cut(s) 335
ApeKI GCWGC 2 cut(s) 66, 121
Asp718I GGTACC 1 cut(s) 175
AspS9I GGNCC 2 cut(s) 166, 369
AsuHPI GGTGA 1 cut(s) 257
AvaII GGWCC 2 cut(s) 166, 369
BanI GGYRCC 1 cut(s) 175
BanII GRGCYC 2 cut(s) 58, 328
BauI CACGAG 1 cut(s) 331
BbvI GCAGC 2 cut(s) 78, 108
BccI CCATC 3 cut(s) 14, 208, 245
BcoDI GTCTC 2 cut(s) 162, 391
BfmI CTRYAG 1 cut(s) 360
BisI GCNGC 2 cut(s) 67, 122
BlsI GCNGC 2 cut(s) 68, 123
Bme18I GGWCC 2 cut(s) 166, 369
BmgT120I GGNCC 2 cut(s) 166, 369
BmiI GGNNCC 2 cut(s) 168, 177
BmsI GCATC 1 cut(s) 195
BpuEI CTTGAG 1 cut(s) 110
BsaI GGTCTC 1 cut(s) 162
BsaWI WCCGGW 2 cut(s) 172, 371
Bsc4I CCNNNNNNNGG 2 cut(s) 333, 499
BseLI CCNNNNNNNGG 2 cut(s) 333, 499
BseXI GCAGC 2 cut(s) 78, 108
BshFI GGCC 1 cut(s) 337
BshNI GGYRCC 1 cut(s) 175
BsiSI CCGG 2 cut(s) 173, 372
BslI CCNNNNNNNGG 2 cut(s) 333, 499
BsmAI GTCTC 2 cut(s) 162, 391
BsnI GGCC 1 cut(s) 337
Bso31I GGTCTC 1 cut(s) 162
Bsp1286I GDGCHC 2 cut(s) 58, 328
Bsp143I GATC 2 cut(s) 12, 98
BspACI CCGC 2 cut(s) 224, 266
BspANI GGCC 1 cut(s) 337
BspLI GGNNCC 2 cut(s) 168, 177
BspPI GGATC 2 cut(s) 7, 106
BspT107I GGYRCC 1 cut(s) 175
BspTNI GGTCTC 1 cut(s) 162
BssMI GATC 2 cut(s) 12, 98
BssSI CACGAG 1 cut(s) 331
Bst2BI CACGAG 1 cut(s) 331
Bst4CI ACNGT 1 cut(s) 156
BstKTI GATC 2 cut(s) 15, 101
BstMAI GTCTC 2 cut(s) 162, 391
BstMBI GATC 2 cut(s) 12, 98
BstMWI GCNNNNNNNGC 2 cut(s) 127, 272
BstSFI CTRYAG 1 cut(s) 360
BstV1I GCAGC 2 cut(s) 78, 108
BsuRI GGCC 1 cut(s) 337
Cfr13I GGNCC 2 cut(s) 166, 369
Csp6I GTAC 1 cut(s) 176
CspCI CAANNNNNGTGG 2 cut(s) 385, 420
CviAII CATG 4 cut(s) 8, 51, 59, 202
CviJI RGCY 5 cut(s) 56, 121, 130, 326, 337
CviKI_1 RGCY 5 cut(s) 56, 121, 130, 326, 337
CviQI GTAC 1 cut(s) 176
DpnI GATC 2 cut(s) 14, 100
DpnII GATC 2 cut(s) 12, 98
Eco24I GRGCYC 2 cut(s) 58, 328
Eco31I GGTCTC 1 cut(s) 162
Eco47I GGWCC 2 cut(s) 166, 369
EcoT38I GRGCYC 2 cut(s) 58, 328
FaeI CATG 4 cut(s) 11, 54, 62, 205
FatI CATG 4 cut(s) 7, 50, 58, 201
Fnu4HI GCNGC 2 cut(s) 67, 122
FriOI GRGCYC 2 cut(s) 58, 328
Fsp4HI GCNGC 2 cut(s) 67, 122
GluI GCNGC 2 cut(s) 67, 122
HaeIII GGCC 1 cut(s) 337
HapII CCGG 2 cut(s) 173, 372
Hin1II CATG 4 cut(s) 11, 54, 62, 205
HinfI GANTC 2 cut(s) 392, 495
HpaII CCGG 2 cut(s) 173, 372
HphI GGTGA 1 cut(s) 257
Hpy188I TCNGA 2 cut(s) 103, 391
HpyCH4III ACNGT 1 cut(s) 156
HpyCH4V TGCA 3 cut(s) 4, 66, 201
HpyF10VI GCNNNNNNNGC 2 cut(s) 127, 272
Hsp92II CATG 4 cut(s) 11, 54, 62, 205
KpnI GGTACC 1 cut(s) 179
Kzo9I GATC 2 cut(s) 12, 98
LmnI GCTCC 1 cut(s) 374
LpnPI CCDG 6 cut(s) 129, 186, 192, 222, 385, 484
Lsp1109I GCAGC 2 cut(s) 78, 108
LweI GCATC 1 cut(s) 195
MaeIII GTNAC 2 cut(s) 83, 268
MalI GATC 2 cut(s) 14, 100
MboI GATC 2 cut(s) 12, 98
MboII GAAGA 1 cut(s) 260
MhlI GDGCHC 2 cut(s) 58, 328
MluCI AATT 3 cut(s) 236, 276, 468
MnlI CCTC 5 cut(s) 26, 180, 327, 343, 404
MseI TTAA 1 cut(s) 45
MspI CCGG 2 cut(s) 173, 372
MwoI GCNNNNNNNGC 2 cut(s) 127, 272
NdeII GATC 2 cut(s) 12, 98
NlaIII CATG 4 cut(s) 11, 54, 62, 205
NlaIV GGNNCC 2 cut(s) 168, 177
NmuCI GTSAC 2 cut(s) 83, 268
PfeI GAWTC 2 cut(s) 392, 495
PkrI GCNGC 2 cut(s) 68, 123
PspN4I GGNNCC 2 cut(s) 168, 177
PspPI GGNCC 2 cut(s) 166, 369
RsaI GTAC 1 cut(s) 177
RsaNI GTAC 1 cut(s) 176
SaqAI TTAA 1 cut(s) 45
SatI GCNGC 2 cut(s) 67, 122
Sau3AI GATC 2 cut(s) 12, 98
Sau96I GGNCC 2 cut(s) 166, 369
SduI GDGCHC 2 cut(s) 58, 328
SetI ASST 4 cut(s) 123, 181, 354, 415
SfaNI GCATC 1 cut(s) 195
SfcI CTRYAG 1 cut(s) 360
SinI GGWCC 2 cut(s) 166, 369
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
Sse9I AATT 3 cut(s) 236, 276, 468
SsiI CCGC 2 cut(s) 224, 266
TaaI ACNGT 1 cut(s) 156
TaqI TCGA 1 cut(s) 18
TasI AATT 3 cut(s) 236, 276, 468
TfiI GAWTC 2 cut(s) 392, 495
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TseFI GTSAC 2 cut(s) 83, 268
TseI GCWGC 2 cut(s) 66, 121
Tsp45I GTSAC 2 cut(s) 83, 268
TspDTI ATGAA 1 cut(s) 99
VpaK11BI GGWCC 2 cut(s) 166, 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.