Rroxscaffold_2G00085660

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
7922493 .. 7923202
710 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00085660.1

Sequence Viewer

Length: 612 bp
ATGCTTCTTTTACCGCCTAGCAAAGCTCTTCCACAAGACTTGGTTCGAGGCACCTTCGAGCTCACGAAAACAAATGTACAAACCCTAAGAGAGCGTGTGATGAATACCTTGGCGAAGAAGAAACAAAATGATGAGGAGGGTTCAGTACTACTTCATTTGTCGACATTTTCTCTAGCTTGTGCCCATACATGGGTTTGCTTAGCCAAGGCAGAGGAAATCAAAGGCCGTGTAGCGGTTGCAGAAACAGAAGGGCTATTGGGTGAAGATGGGTTTTTTGTGGCCGTAAATGCGATAACTGAGGCTTTGAGAAGTTTGGATGATGGGATTTTCAATGGAGCAGAGAATTGGGTTTCGAAATTCCTCGACTTTTCCCTCTATAAGAGAATATATTCGATTGCCGGTTCACAATGGTTTGGGGTTTATGACACTGATTTCGGATGGGGTAAACAGAAGAAGGTCGAGCTTGTTTCTATAGATAAGACTGAAGCGGTCTCTCTTTCAGATAGCAAGAATGGTGGTGGAGCTGTTGAGGTTGGATTGGCTTTGAAGAAACAATATATGGAGACTTTTGTTTCTCTATTTCCTAGTCAATCCAAGGTGTTTGAACTTTGA

Protein Analysis

203

Amino Acids

22.42

Weight (kDa)

5.53

Isoelectric Point (pI)

35.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 94 - 192 5.5e-08 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 50
AccI GTMKAC 1 cut(s) 161
AciI CCGC 3 cut(s) 14, 233, 488
AcoI YGGCCR 1 cut(s) 279
AcsI RAATTY 1 cut(s) 356
AcuI CTGAAG 1 cut(s) 504
AfaI GTAC 2 cut(s) 78, 147
AfiI CCNNNNNNNGG 3 cut(s) 189, 190, 232
AgsI TTSAA 3 cut(s) 331, 547, 605
AluBI AGCT 5 cut(s) 26, 61, 176, 463, 524
AluI AGCT 5 cut(s) 26, 61, 176, 463, 524
Alw21I GWGCWC 1 cut(s) 63
Alw26I GTCTC 2 cut(s) 496, 557
AoxI GGCC 2 cut(s) 223, 279
ApoI RAATTY 1 cut(s) 356
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
Asp700I GAANNNNTTC 1 cut(s) 388
AsuHPI GGTGA 1 cut(s) 272
AsuII TTCGAA 1 cut(s) 353
BaeGI GKGCMC 1 cut(s) 184
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 1 cut(s) 63
Bbv12I GWGCWC 1 cut(s) 63
BccI CCATC 3 cut(s) 260, 314, 432
BceAI ACGGC 2 cut(s) 210, 266
BcoDI GTCTC 2 cut(s) 496, 557
BfaI CTAG 3 cut(s) 18, 173, 585
BfmI CTRYAG 1 cut(s) 471
BlpI GCTNAGC 1 cut(s) 199
BmcAI AGTACT 1 cut(s) 147
BmiI GGNNCC 1 cut(s) 52
Bpu1102I GCTNAGC 1 cut(s) 199
Bpu14I TTCGAA 1 cut(s) 353
BsaI GGTCTC 1 cut(s) 496
BsaJI CCNNGG 3 cut(s) 108, 204, 594
Bsc4I CCNNNNNNNGG 3 cut(s) 189, 190, 232
Bse118I RCCGGY 1 cut(s) 398
BseDI CCNNGG 3 cut(s) 108, 204, 594
BseGI GGATG 2 cut(s) 322, 443
BseLI CCNNNNNNNGG 3 cut(s) 189, 190, 232
BseMII CTCAG 1 cut(s) 288
BseRI GAGGAG 1 cut(s) 149
BseSI GKGCMC 1 cut(s) 184
BshFI GGCC 2 cut(s) 225, 281
BshNI GGYRCC 1 cut(s) 50
BsiHKAI GWGCWC 1 cut(s) 63
BsiSI CCGG 1 cut(s) 399
BslI CCNNNNNNNGG 3 cut(s) 189, 190, 232
BsmAI GTCTC 2 cut(s) 496, 557
BsnI GGCC 2 cut(s) 225, 281
Bso31I GGTCTC 1 cut(s) 496
Bsp119I TTCGAA 1 cut(s) 353
Bsp1286I GDGCHC 2 cut(s) 63, 184
Bsp1407I TGTACA 1 cut(s) 76
Bsp1720I GCTNAGC 1 cut(s) 199
BspACI CCGC 3 cut(s) 14, 233, 488
BspANI GGCC 2 cut(s) 225, 281
BspCNI CTCAG 1 cut(s) 289
BspLI GGNNCC 1 cut(s) 52
BspQI GCTCTTC 1 cut(s) 33
BspT104I TTCGAA 1 cut(s) 353
BspT107I GGYRCC 1 cut(s) 50
BspTNI GGTCTC 1 cut(s) 496
BsrFI RCCGGY 1 cut(s) 398
BsrGI TGTACA 1 cut(s) 76
BssAI RCCGGY 1 cut(s) 398
BssECI CCNNGG 3 cut(s) 108, 204, 594
BssT1I CCWWGG 3 cut(s) 108, 204, 594
Bst6I CTCTTC 1 cut(s) 33
BstAUI TGTACA 1 cut(s) 76
BstBI TTCGAA 1 cut(s) 353
BstDEI CTNAG 3 cut(s) 86, 199, 297
BstF5I GGATG 2 cut(s) 322, 443
BstMAI GTCTC 2 cut(s) 496, 557
BstMWI GCNNNNNNNGC 1 cut(s) 287
BstSFI CTRYAG 1 cut(s) 471
BstSLI GKGCMC 1 cut(s) 184
BsuRI GGCC 2 cut(s) 225, 281
BtsCI GGATG 2 cut(s) 322, 443
BtsIMutI CAGTG 1 cut(s) 426
Cfr10I RCCGGY 1 cut(s) 398
Csp6I GTAC 2 cut(s) 77, 146
CspCI CAANNNNNGTGG 4 cut(s) 21, 56, 496, 531
CviAII CATG 1 cut(s) 189
CviQI GTAC 2 cut(s) 77, 146
DdeI CTNAG 3 cut(s) 86, 199, 297
EaeI YGGCCR 1 cut(s) 279
Eam1104I CTCTTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 33
Ecl136II GAGCTC 1 cut(s) 61
Eco130I CCWWGG 3 cut(s) 108, 204, 594
Eco24I GRGCYC 1 cut(s) 63
Eco31I GGTCTC 1 cut(s) 496
Eco53kI GAGCTC 1 cut(s) 61
Eco57I CTGAAG 1 cut(s) 504
EcoICRI GAGCTC 1 cut(s) 61
EcoT14I CCWWGG 3 cut(s) 108, 204, 594
EcoT38I GRGCYC 1 cut(s) 63
ErhI CCWWGG 3 cut(s) 108, 204, 594
FaeI CATG 1 cut(s) 192
FaiI YATR 8 cut(s) 186, 190, 378, 388, 423, 473, 558, 560
FatI CATG 1 cut(s) 188
FblI GTMKAC 1 cut(s) 161
FokI GGATG 2 cut(s) 329, 450
FriOI GRGCYC 1 cut(s) 63
FspBI CTAG 3 cut(s) 18, 173, 585
HaeIII GGCC 2 cut(s) 225, 281
HapII CCGG 1 cut(s) 399
Hin1II CATG 1 cut(s) 192
HincII GTYRAC 1 cut(s) 162
HindII GTYRAC 1 cut(s) 162
HpaII CCGG 1 cut(s) 399
HphI GGTGA 1 cut(s) 272
Hpy166II GTNNAC 3 cut(s) 162, 404, 446
Hpy188I TCNGA 2 cut(s) 437, 502
Hpy188III TCNNGA 1 cut(s) 64
Hpy8I GTNNAC 3 cut(s) 162, 404, 446
HpyAV CCTTC 3 cut(s) 64, 242, 448
HpyCH4V TGCA 1 cut(s) 239
HpyF10VI GCNNNNNNNGC 1 cut(s) 287
HpyF3I CTNAG 3 cut(s) 86, 199, 297
Hsp92II CATG 1 cut(s) 192
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 2 cut(s) 335, 521
LpnPI CCDG 1 cut(s) 412
MaeI CTAG 3 cut(s) 18, 173, 585
MboII GAAGA 6 cut(s) 20, 127, 130, 275, 463, 559
MhlI GDGCHC 2 cut(s) 63, 184
MluCI AATT 2 cut(s) 343, 356
MmeI TCCRAC 1 cut(s) 514
MnlI CCTC 8 cut(s) 41, 127, 130, 205, 292, 371, 383, 523
MroXI GAANNNNTTC 1 cut(s) 388
MspI CCGG 1 cut(s) 399
MwoI GCNNNNNNNGC 1 cut(s) 287
NlaIII CATG 1 cut(s) 192
NlaIV GGNNCC 1 cut(s) 52
NspV TTCGAA 1 cut(s) 353
PciSI GCTCTTC 1 cut(s) 33
PdmI GAANNNNTTC 1 cut(s) 388
Psp124BI GAGCTC 1 cut(s) 63
PspN4I GGNNCC 1 cut(s) 52
RsaI GTAC 2 cut(s) 78, 147
RsaNI GTAC 2 cut(s) 77, 146
SacI GAGCTC 1 cut(s) 63
SalI GTCGAC 1 cut(s) 160
SapI GCTCTTC 1 cut(s) 33
ScaI AGTACT 1 cut(s) 147
SduI GDGCHC 2 cut(s) 63, 184
SfcI CTRYAG 1 cut(s) 471
SfuI TTCGAA 1 cut(s) 353
Sse9I AATT 2 cut(s) 343, 356
SsiI CCGC 3 cut(s) 14, 233, 488
SspMI CTAG 3 cut(s) 18, 173, 585
SstI GAGCTC 1 cut(s) 63
StyI CCWWGG 3 cut(s) 108, 204, 594
TaqI TCGA 7 cut(s) 46, 57, 161, 353, 363, 392, 459
TasI AATT 2 cut(s) 343, 356
TatI WGTACW 2 cut(s) 76, 145
TscAI CASTG 1 cut(s) 433
TspDTI ATGAA 2 cut(s) 116, 143
TspRI CASTG 1 cut(s) 433
XapI RAATTY 1 cut(s) 356
XmiI GTMKAC 1 cut(s) 161
XmnI GAANNNNTTC 1 cut(s) 388
XspI CTAG 3 cut(s) 18, 173, 585
ZrmI AGTACT 1 cut(s) 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.