pycom111g05710

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Reverse (-)
3636371 .. 3636922
552 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g05710.1

Sequence Viewer

Length: 552 bp
ATGCACCATGTAATCCTAGACGGCTCGACTTCAACCATGTTTGTAAAATTATGGGCTCACATATGCAAACACGAAAATTCCAATTTGTTACCTGACCAGCTCAAACCATTATACGACAGAAGCGTCGTCCAAGACACCGCCGGGCTCGAACCAATTTTCTTGAACCAATTGCTAAACATGGATTCAGACCGGCCCTTCAATAGAAGCTTGATGTTCTTCGATCATTTTAAAGCTCCAGCAGAAGACACAATTCGAGGAACGTTTGTATTCACTCGGGAAAAAATAGAAGCACTAAGGCAATCGGTGAAAGAGAAGAAACAACAACAACATGGTCATCAATCGGTTCAATATTTGTCCACGTTTTGTGTCACATGTGCGTATGTATGGATTTGCTTAATCAAGGCAAAAGAAATACAAGGCGATCATAAGGCTGCAGTTCTGATGGCCTTTACTGTGGACTGTAGGTCGCGTTTAGACCCATCTATACCCACCACTTATTTCGGCAACTGCTTATCATTCAGCGGAGCCGTTGCTGAAACAAAGATGGTCTGA

Protein Analysis

184

Amino Acids

20.87

Weight (kDa)

7.67

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 1 - 173 7.1e-17 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 122
AccII CGCG 1 cut(s) 469
AciI CCGC 2 cut(s) 138, 522
AclI AACGTT 1 cut(s) 260
AcsI RAATTY 1 cut(s) 76
AflIII ACRYGT 1 cut(s) 371
AgsI TTSAA 4 cut(s) 33, 163, 199, 347
AhdI GACNNNNNGTC 1 cut(s) 463
AluBI AGCT 3 cut(s) 100, 207, 233
AluI AGCT 3 cut(s) 100, 207, 233
Ama87I CYCGRG 1 cut(s) 273
AoxI GGCC 2 cut(s) 191, 444
ApeKI GCWGC 1 cut(s) 431
ApoI RAATTY 1 cut(s) 76
AspS9I GGNCC 1 cut(s) 192
AsuC2I CCSGG 1 cut(s) 142
AsuHPI GGTGA 1 cut(s) 316
AvaI CYCGRG 1 cut(s) 273
BanII GRGCYC 2 cut(s) 58, 147
BbsI GAAGAC 1 cut(s) 249
BbvI GCAGC 1 cut(s) 418
BccI CCATC 3 cut(s) 436, 487, 538
BceAI ACGGC 2 cut(s) 37, 512
BcnI CCSGG 1 cut(s) 142
BfaI CTAG 1 cut(s) 17
BfmI CTRYAG 2 cut(s) 432, 460
BisI GCNGC 1 cut(s) 432
BlsI GCNGC 1 cut(s) 433
Bme1390I CCNGG 1 cut(s) 142
BmeRI GACNNNNNGTC 1 cut(s) 463
BmeT110I CYCGRG 1 cut(s) 273
BmgT120I GGNCC 1 cut(s) 192
BmiI GGNNCC 1 cut(s) 526
BmrFI CCNGG 1 cut(s) 142
BpiI GAAGAC 1 cut(s) 249
BpmI CTGGAG 1 cut(s) 219
BpuMI CCSGG 1 cut(s) 142
Bse118I RCCGGY 1 cut(s) 189
BseXI GCAGC 1 cut(s) 418
Bsh1236I CGCG 1 cut(s) 469
BshFI GGCC 2 cut(s) 193, 446
BsiHKCI CYCGRG 1 cut(s) 273
BsiSI CCGG 2 cut(s) 141, 190
BsnI GGCC 2 cut(s) 193, 446
BsoBI CYCGRG 1 cut(s) 273
Bsp1286I GDGCHC 2 cut(s) 58, 147
Bsp143I GATC 2 cut(s) 220, 421
BspACI CCGC 2 cut(s) 138, 522
BspANI GGCC 2 cut(s) 193, 446
BspFNI CGCG 1 cut(s) 469
BspLI GGNNCC 1 cut(s) 526
BspMAI CTGCAG 1 cut(s) 436
BsrFI RCCGGY 1 cut(s) 189
BssAI RCCGGY 1 cut(s) 189
BssMI GATC 2 cut(s) 220, 421
Bst4CI ACNGT 2 cut(s) 454, 461
BstDEI CTNAG 1 cut(s) 293
BstFNI CGCG 1 cut(s) 469
BstKTI GATC 2 cut(s) 223, 424
BstMBI GATC 2 cut(s) 220, 421
BstNSI RCATGY 1 cut(s) 375
BstSCI CCNGG 1 cut(s) 140
BstSFI CTRYAG 2 cut(s) 432, 460
BstUI CGCG 1 cut(s) 469
BstV1I GCAGC 1 cut(s) 418
BstV2I GAAGAC 1 cut(s) 249
BsuRI GGCC 2 cut(s) 193, 446
Cfr10I RCCGGY 1 cut(s) 189
Cfr13I GGNCC 1 cut(s) 192
CseI GACGC 1 cut(s) 112
CviAII CATG 5 cut(s) 8, 37, 178, 329, 372
DdeI CTNAG 1 cut(s) 293
DpnI GATC 2 cut(s) 222, 423
DpnII GATC 2 cut(s) 220, 421
DraI TTTAAA 1 cut(s) 229
DrdI GACNNNNNNGTC 1 cut(s) 122
DriI GACNNNNNGTC 1 cut(s) 463
DseDI GACNNNNNNGTC 1 cut(s) 122
Eam1105I GACNNNNNGTC 1 cut(s) 463
Eco24I GRGCYC 2 cut(s) 58, 147
Eco88I CYCGRG 1 cut(s) 273
EcoT38I GRGCYC 2 cut(s) 58, 147
FaeI CATG 5 cut(s) 11, 40, 181, 332, 375
FatI CATG 5 cut(s) 7, 36, 177, 328, 371
FauNDI CATATG 1 cut(s) 62
Fnu4HI GCNGC 1 cut(s) 432
FriOI GRGCYC 2 cut(s) 58, 147
Fsp4HI GCNGC 1 cut(s) 432
FspBI CTAG 1 cut(s) 17
GluI GCNGC 1 cut(s) 432
GsuI CTGGAG 1 cut(s) 219
HaeIII GGCC 2 cut(s) 193, 446
HapII CCGG 2 cut(s) 141, 190
HgaI GACGC 1 cut(s) 112
Hin1II CATG 5 cut(s) 11, 40, 181, 332, 375
HindIII AAGCTT 1 cut(s) 205
HinfI GANTC 1 cut(s) 182
HpaII CCGG 2 cut(s) 141, 190
HphI GGTGA 1 cut(s) 316
Hpy166II GTNNAC 2 cut(s) 357, 457
Hpy188I TCNGA 3 cut(s) 187, 441, 551
Hpy188III TCNNGA 2 cut(s) 160, 275
Hpy8I GTNNAC 2 cut(s) 357, 457
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 1 cut(s) 205
HpyCH4III ACNGT 2 cut(s) 454, 461
HpyCH4IV ACGT 2 cut(s) 260, 359
HpyCH4V TGCA 3 cut(s) 4, 66, 434
HpyF3I CTNAG 1 cut(s) 293
HpySE526I ACGT 2 cut(s) 260, 359
Hsp92II CATG 5 cut(s) 11, 40, 181, 332, 375
Kzo9I GATC 2 cut(s) 220, 421
LmnI GCTCC 2 cut(s) 238, 524
LpnPI CCDG 5 cut(s) 105, 110, 154, 203, 249
Lsp1109I GCAGC 1 cut(s) 418
MaeI CTAG 1 cut(s) 17
MaeII ACGT 2 cut(s) 260, 359
MaeIII GTNAC 2 cut(s) 87, 367
MalI GATC 2 cut(s) 222, 423
MboI GATC 2 cut(s) 220, 421
MboII GAAGA 3 cut(s) 208, 254, 325
MfeI CAATTG 1 cut(s) 167
MhlI GDGCHC 2 cut(s) 58, 147
MluCI AATT 6 cut(s) 47, 76, 82, 153, 167, 249
MnlI CCTC 1 cut(s) 248
MseI TTAA 2 cut(s) 228, 395
MspA1I CMGCKG 1 cut(s) 522
MspI CCGG 2 cut(s) 141, 190
MspR9I CCNGG 1 cut(s) 142
MunI CAATTG 1 cut(s) 167
MvnI CGCG 1 cut(s) 469
NciI CCSGG 1 cut(s) 142
NdeI CATATG 1 cut(s) 62
NdeII GATC 2 cut(s) 220, 421
NlaIII CATG 5 cut(s) 11, 40, 181, 332, 375
NlaIV GGNNCC 1 cut(s) 526
NmuCI GTSAC 1 cut(s) 367
NspI RCATGY 1 cut(s) 375
PciI ACATGT 1 cut(s) 371
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PfeI GAWTC 1 cut(s) 182
PkrI GCNGC 1 cut(s) 433
PscI ACATGT 1 cut(s) 371
Psp1406I AACGTT 1 cut(s) 260
PspN4I GGNNCC 1 cut(s) 526
PspPI GGNCC 1 cut(s) 192
PstI CTGCAG 1 cut(s) 436
SaqAI TTAA 2 cut(s) 228, 395
SatI GCNGC 1 cut(s) 432
Sau3AI GATC 2 cut(s) 220, 421
Sau96I GGNCC 1 cut(s) 192
ScrFI CCNGG 1 cut(s) 142
SduI GDGCHC 2 cut(s) 58, 147
SetI ASST 7 cut(s) 94, 102, 209, 235, 263, 362, 467
SfcI CTRYAG 2 cut(s) 432, 460
Sse9I AATT 6 cut(s) 47, 76, 82, 153, 167, 249
SsiI CCGC 2 cut(s) 138, 522
SspI AATATT 1 cut(s) 350
SspMI CTAG 1 cut(s) 17
StyD4I CCNGG 1 cut(s) 140
TaaI ACNGT 2 cut(s) 454, 461
TaiI ACGT 2 cut(s) 263, 362
TaqI TCGA 4 cut(s) 26, 147, 219, 253
TasI AATT 6 cut(s) 47, 76, 82, 153, 167, 249
TfiI GAWTC 1 cut(s) 182
Tru1I TTAA 2 cut(s) 228, 395
Tru9I TTAA 2 cut(s) 228, 395
TseFI GTSAC 1 cut(s) 367
TseI GCWGC 1 cut(s) 431
Tsp45I GTSAC 1 cut(s) 367
XapI RAATTY 1 cut(s) 76
XceI RCATGY 1 cut(s) 375
XspI CTAG 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.