Rorug05G0113300

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
10090498 .. 10090743
246 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0113300.1

Sequence Viewer

Length: 246 bp
ATGATGACATTGGGGGCATTTCCTACCAAAAGGCTTGCGACTTGTCTAGTCACATTTGCAGTTTCACTCGGGTTATCAGTAAGCACCCAATCTTTTGGTCTACAGGCCCTACTTTTTCCGAGTCTCCGTTTGTCCCAAATGAAGGAAGAAAGTTTATATAATAGTCGCATACATATTCGACAAAATACTGTAGCAGATCACATTCACCAGCTCACAAGAATTGAAGTGGTCTCTCGGATTCTTTGA

Protein Analysis

81

Amino Acids

9.09

Weight (kDa)

10.26

Isoelectric Point (pI)

68.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 100
AfiI CCNNNNNNNGG 1 cut(s) 142
AgsI TTSAA 1 cut(s) 224
AluBI AGCT 1 cut(s) 211
AluI AGCT 1 cut(s) 211
Alw26I GTCTC 2 cut(s) 128, 235
Ama87I CYCGRG 1 cut(s) 68
AoxI GGCC 1 cut(s) 105
AspS9I GGNCC 1 cut(s) 106
AsuHPI GGTGA 1 cut(s) 197
AvaI CYCGRG 1 cut(s) 68
BcoDI GTCTC 2 cut(s) 128, 235
BfaI CTAG 1 cut(s) 47
BfmI CTRYAG 2 cut(s) 101, 189
BmeT110I CYCGRG 1 cut(s) 68
BmgT120I GGNCC 1 cut(s) 106
BsaI GGTCTC 1 cut(s) 235
Bsc4I CCNNNNNNNGG 1 cut(s) 142
BseLI CCNNNNNNNGG 1 cut(s) 142
BshFI GGCC 1 cut(s) 107
BsiHKCI CYCGRG 1 cut(s) 68
BslFI GGGAC 1 cut(s) 118
BslI CCNNNNNNNGG 1 cut(s) 142
BsmAI GTCTC 2 cut(s) 128, 235
BsmFI GGGAC 1 cut(s) 118
BsnI GGCC 1 cut(s) 107
Bso31I GGTCTC 1 cut(s) 235
BsoBI CYCGRG 1 cut(s) 68
Bsp143I GATC 1 cut(s) 196
BspANI GGCC 1 cut(s) 107
BspTNI GGTCTC 1 cut(s) 235
BssMI GATC 1 cut(s) 196
Bst4CI ACNGT 1 cut(s) 190
BstC8I GCNNGC 1 cut(s) 36
BstKTI GATC 1 cut(s) 199
BstMAI GTCTC 2 cut(s) 128, 235
BstMBI GATC 1 cut(s) 196
BstSFI CTRYAG 2 cut(s) 101, 189
BstXI CCANNNNNNTGG 1 cut(s) 95
BsuRI GGCC 1 cut(s) 107
Cac8I GCNNGC 1 cut(s) 36
Cfr13I GGNCC 1 cut(s) 106
CviJI RGCY 3 cut(s) 34, 107, 211
CviKI_1 RGCY 3 cut(s) 34, 107, 211
DpnI GATC 1 cut(s) 198
DpnII GATC 1 cut(s) 196
Eco31I GGTCTC 1 cut(s) 235
Eco88I CYCGRG 1 cut(s) 68
EcoO109I RGGNCCY 1 cut(s) 106
FaiI YATR 4 cut(s) 157, 159, 170, 174
FaqI GGGAC 1 cut(s) 118
FblI GTMKAC 1 cut(s) 100
FspBI CTAG 1 cut(s) 47
HaeIII GGCC 1 cut(s) 107
HinfI GANTC 2 cut(s) 121, 238
HphI GGTGA 1 cut(s) 197
Hpy166II GTNNAC 1 cut(s) 101
Hpy188I TCNGA 2 cut(s) 120, 237
Hpy8I GTNNAC 1 cut(s) 101
HpyAV CCTTC 1 cut(s) 136
HpyCH4III ACNGT 1 cut(s) 190
HpyCH4V TGCA 1 cut(s) 59
Kzo9I GATC 1 cut(s) 196
LpnPI CCDG 2 cut(s) 89, 221
MaeI CTAG 1 cut(s) 47
MaeIII GTNAC 1 cut(s) 49
MalI GATC 1 cut(s) 198
MboI GATC 1 cut(s) 196
MboII GAAGA 1 cut(s) 158
MluCI AATT 1 cut(s) 219
MlyI GAGTC 1 cut(s) 130
NdeII GATC 1 cut(s) 196
NmuCI GTSAC 1 cut(s) 49
PfeI GAWTC 1 cut(s) 238
PleI GAGTC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 129
PspPI GGNCC 1 cut(s) 106
Sau3AI GATC 1 cut(s) 196
Sau96I GGNCC 1 cut(s) 106
SchI GAGTC 1 cut(s) 130
SetI ASST 1 cut(s) 213
SfcI CTRYAG 2 cut(s) 101, 189
SgeI CNNG 9 cut(s) 47, 54, 59, 80, 82, 116, 132, 220, 228
Sse9I AATT 1 cut(s) 219
SspMI CTAG 1 cut(s) 47
TaaI ACNGT 1 cut(s) 190
TaqI TCGA 1 cut(s) 178
TasI AATT 1 cut(s) 219
TfiI GAWTC 1 cut(s) 238
TseFI GTSAC 1 cut(s) 49
Tsp45I GTSAC 1 cut(s) 49
TspDTI ATGAA 1 cut(s) 155
TspGWI ACGGA 1 cut(s) 116
XmiI GTMKAC 1 cut(s) 100
XspI CTAG 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.