RLG00000029433

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
38736202 .. 38736549
348 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029433

Sequence Viewer

Length: 348 bp
ATGTTGGGTGAAGATGGACTGGTTGTAGCTGTGAGTGCAATTACAGAAGCTGTAAGAAGCTTGGAGAAAGGGCTTTTGGATGGGGCAGAGAATTGGGTTTCGAAATTTCTGGATTTTTCGCTGTATGGTAGGACATATTCGATTGCAGGGTCACATAGGTTTGAGGTTTATGATACCGACTTTGGATGGCGAAGGCCGAACAGGGTTGAGGTCATCTCCACTAATAAGACGGGAGCCATTTCTCTTTCGGATAGTAAGAATGGTGGTGGAGGTGTTGAGGTTGGATTGGTTTTGAAGAAAAAGTATGCGGAGGCTTTTGATGCTCTGTTTGCTAGCCTAGTGCATTAG

Protein Analysis

116

Amino Acids

12.47

Weight (kDa)

5.64

Isoelectric Point (pI)

23.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 32 - 107 1.1e-07 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 308
AcsI RAATTY 1 cut(s) 104
AgsI TTSAA 1 cut(s) 295
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AluBI AGCT 3 cut(s) 29, 50, 60
AluI AGCT 3 cut(s) 29, 50, 60
AlwNI CAGNNNCTG 1 cut(s) 50
AoxI GGCC 1 cut(s) 194
ApoI RAATTY 1 cut(s) 104
AsuHPI GGTGA 1 cut(s) 20
AsuII TTCGAA 1 cut(s) 101
AsuNHI GCTAGC 1 cut(s) 332
BccI CCATC 3 cut(s) 8, 74, 180
BfaI CTAG 2 cut(s) 333, 338
BmiI GGNNCC 1 cut(s) 235
BmsI GCATC 1 cut(s) 310
BmtI GCTAGC 1 cut(s) 336
BplI GAGNNNNNCTC 2 cut(s) 200, 232
Bpu14I TTCGAA 1 cut(s) 101
Bse1I ACTGG 1 cut(s) 24
BseGI GGATG 2 cut(s) 85, 191
BseNI ACTGG 1 cut(s) 24
BshFI GGCC 1 cut(s) 196
BsnI GGCC 1 cut(s) 196
Bsp119I TTCGAA 1 cut(s) 101
BspACI CCGC 1 cut(s) 308
BspANI GGCC 1 cut(s) 196
BspLI GGNNCC 1 cut(s) 235
BspOI GCTAGC 1 cut(s) 336
BspT104I TTCGAA 1 cut(s) 101
BsrI ACTGG 1 cut(s) 24
BstBI TTCGAA 1 cut(s) 101
BstC8I GCNNGC 1 cut(s) 334
BstF5I GGATG 2 cut(s) 85, 191
BstMWI GCNNNNNNNGC 3 cut(s) 35, 320, 329
BsuRI GGCC 1 cut(s) 196
BtsCI GGATG 2 cut(s) 85, 191
Cac8I GCNNGC 1 cut(s) 334
CaiI CAGNNNCTG 1 cut(s) 50
CviJI RGCY 8 cut(s) 29, 50, 60, 73, 196, 236, 314, 336
CviKI_1 RGCY 8 cut(s) 29, 50, 60, 73, 196, 236, 314, 336
FaiI YATR 5 cut(s) 126, 136, 156, 171, 306
FokI GGATG 2 cut(s) 92, 198
FspBI CTAG 2 cut(s) 333, 338
HaeIII GGCC 1 cut(s) 196
HindIII AAGCTT 1 cut(s) 58
HphI GGTGA 1 cut(s) 20
Hpy188I TCNGA 1 cut(s) 250
Hpy188III TCNNGA 1 cut(s) 110
HpyAV CCTTC 1 cut(s) 186
HpyCH4V TGCA 3 cut(s) 38, 146, 343
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 320, 329
LmnI GCTCC 1 cut(s) 233
LpnPI CCDG 4 cut(s) 5, 95, 132, 187
LweI GCATC 1 cut(s) 310
MaeI CTAG 2 cut(s) 333, 338
MaeIII GTNAC 1 cut(s) 150
MboII GAAGA 2 cut(s) 23, 307
MluCI AATT 3 cut(s) 39, 91, 104
MmeI TCCRAC 1 cut(s) 262
MnlI CCTC 5 cut(s) 157, 202, 263, 271, 304
MwoI GCNNNNNNNGC 3 cut(s) 35, 320, 329
NheI GCTAGC 1 cut(s) 332
NlaIV GGNNCC 1 cut(s) 235
NmuCI GTSAC 1 cut(s) 150
NspV TTCGAA 1 cut(s) 101
PspN4I GGNNCC 1 cut(s) 235
PstNI CAGNNNCTG 1 cut(s) 50
SetI ASST 8 cut(s) 31, 52, 62, 161, 168, 213, 274, 282
SfaNI GCATC 1 cut(s) 310
SfuI TTCGAA 1 cut(s) 101
SgeI CNNG 6 cut(s) 32, 73, 122, 159, 214, 243
Sse9I AATT 3 cut(s) 39, 91, 104
SsiI CCGC 1 cut(s) 308
SspMI CTAG 2 cut(s) 333, 338
TaqI TCGA 2 cut(s) 101, 140
TasI AATT 3 cut(s) 39, 91, 104
TseFI GTSAC 1 cut(s) 150
Tsp45I GTSAC 1 cut(s) 150
XapI RAATTY 1 cut(s) 104
XspI CTAG 2 cut(s) 333, 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.