Rroxscaffold_4G00316720

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000138
Physical Location & Seq
Reverse (-)
41680202 .. 41682109
1908 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00316720.1

Sequence Viewer

Length: 1347 bp
ATGGCAAACTTATCAGTGAAGAAAGTTGAGGTCTGCAGGGTGGCACCAAAACCAGGATCACCAGAGAACCAGTCACTTCCTCTAACATTCTTCGACTTATTGTGGCTCCGTTTTCAACCCGTAGAACGCCTCATCTTTTACCAAACCTCTTCCACCGATTCCGTACTTTCCAAACTCAAAACCTCCCTATCTCTCACTCTCCAACACTTCCTACCTCTCGCCGGAAACCTCACCTGGCCCCAAGACTCCCTCAAACCCGTTCTAAGCTACGTTCAAGGCGACGCCGTTTCACTCACCGTAGCTGAGTCCGATGCAGATTTCGACCACCTCATTAGCAGTAACTTTCTTGCAGCCCAAGATTTCAGTCCTCTAGTTCCTCAGTTGGATGTGACTGATGAGCGAGCCGCCGCGATGGCATTGCAAATCACTGTCTATCCCAACCGCGGATTCTCCATCGGAACGACCATGCACCACGCAATCCTTGACGGCAAAACTTGGACCTCGTTTGTCAAAGCATGGGCTCATCTATGCAAATATGAAGAAGCACACGCTTTGCCTTCGTCTTTGGTACCTTTCTACGACAGAAAGGTCGTCAAGGACCCGGCCGGGCTCGGAGAACTTTACTCCAGCCAACACCAAAACAAGGACGGCCGGACCGACAACAGAAGCTTAAGTATTGCCTCCATCAGTAAAGCTCGCAAGGTCCCAGATCGAGAAGACTCGATTCGTGGCACATTCGAGTTCACTCGCGCATTTATACAAACCCTTAGAGCGCATGTCACATCTAAAATGGCTTCTGATTCATCGCTCCATTTGTCAACTTTTTCTCTGGTCTGTGCCTACACATGGGTTTGTATGGTGAAGGCCGAAGAAATCAAAGGGGAGAAGACGGCTCTCATCATCGGGGCAGACTCCAGATCCCGGTTGGACCCTCCAATACCTGCAATGTATTTTGGTAACTGCATAGTGGGTCGTGTAGCTGTTGCGGAAACAAAAGGGATGTTGGGTGAAGATGGACTGGTTGTAGCTGTGAGTGCAATTACAGAAGCTGTAAGAAGCTTGGAGAAAGGGCTTTTGGATGGGGCAGAGAATTGGGTTTCGAAATTTCTGGATTTTTCACTGTATGGTAGGACATATTCGATTGCAGGGTCACAGAGGTTTGAGGTTTATGATACCGACTTTGGATGGCGAAGGCCGAAAAGGGTTGAGGTCATCTCCATTGATAAGACGGGAGCCATTTCTCTTTCGGATAGTAAGAATGGTGGTGGAGGTGTTGAGGTTGGATTGGTTTTGAAGAAAAAGTATGCGGAGGCTTTTGATGCTCTGTTTGCTGGCCTTGTGCATTAG

Protein Analysis

448

Amino Acids

49.23

Weight (kDa)

6.81

Isoelectric Point (pI)

37.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 440 1.7e-49 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 587
Acc36I ACCTGC 1 cut(s) 949
Acc65I GGTACC 1 cut(s) 568
AccB1I GGYRCC 2 cut(s) 43, 568
AccII CGCG 3 cut(s) 410, 444, 750
AciI CCGC 6 cut(s) 405, 408, 442, 444, 986, 1307
AclWI GGATC 2 cut(s) 64, 912
AcoI YGGCCR 2 cut(s) 603, 649
AcsI RAATTY 1 cut(s) 1103
AcyI GRCGYC 1 cut(s) 282
AfaI GTAC 2 cut(s) 165, 570
AfiI CCNNNNNNNGG 6 cut(s) 53, 221, 443, 643, 846, 921
AflII CTTAAG 1 cut(s) 670
AgsI TTSAA 3 cut(s) 116, 275, 1294
AjnI CCWGG 2 cut(s) 52, 233
AjuI GAANNNNNNNTTGG 4 cut(s) 431, 463, 1058, 1090
AluBI AGCT 8 cut(s) 267, 302, 669, 695, 980, 1028, 1049, 1059
AluI AGCT 8 cut(s) 267, 302, 669, 695, 980, 1028, 1049, 1059
AlwI GGATC 2 cut(s) 64, 912
AlwNI CAGNNNCTG 1 cut(s) 1049
AoxI GGCC 6 cut(s) 236, 603, 649, 864, 1193, 1333
ApeKI GCWGC 1 cut(s) 350
ApoI RAATTY 1 cut(s) 1103
Asp718I GGTACC 1 cut(s) 568
AspLEI GCGC 2 cut(s) 752, 775
AspS9I GGNCC 6 cut(s) 237, 498, 598, 654, 703, 928
AsuC2I CCSGG 3 cut(s) 602, 607, 922
AsuHPI GGTGA 5 cut(s) 51, 223, 286, 871, 1019
AsuII TTCGAA 1 cut(s) 1100
AvaII GGWCC 5 cut(s) 498, 598, 654, 703, 928
BanI GGYRCC 2 cut(s) 43, 568
BanII GRGCYC 2 cut(s) 523, 612
BbsI GAAGAC 2 cut(s) 723, 893
BbvI GCAGC 1 cut(s) 362
BccI CCATC 6 cut(s) 406, 461, 692, 1007, 1073, 1179
BceAI ACGGC 4 cut(s) 269, 502, 664, 906
BcgI CGANNNNNNTGC 2 cut(s) 400, 434
BciT130I CCWGG 2 cut(s) 54, 235
BcnI CCSGG 3 cut(s) 602, 607, 922
BfaI CTAG 1 cut(s) 371
BfmI CTRYAG 1 cut(s) 34
BfrI CTTAAG 1 cut(s) 670
BfuAI ACCTGC 1 cut(s) 949
BglI GCCNNNNNGGC 1 cut(s) 413
BisI GCNGC 3 cut(s) 351, 405, 408
BlsI GCNGC 3 cut(s) 352, 406, 409
Bme1390I CCNGG 5 cut(s) 54, 235, 602, 607, 922
Bme18I GGWCC 5 cut(s) 498, 598, 654, 703, 928
BmgT120I GGNCC 6 cut(s) 237, 498, 598, 654, 703, 928
BmiI GGNNCC 8 cut(s) 45, 107, 239, 570, 600, 705, 930, 1234
BmrFI CCNGG 5 cut(s) 54, 235, 602, 607, 922
BmsI GCATC 2 cut(s) 301, 1309
BpiI GAAGAC 2 cut(s) 723, 893
BplI GAGNNNNNCTC 2 cut(s) 1199, 1231
BpmI CTGGAG 2 cut(s) 610, 898
Bpu14I TTCGAA 1 cut(s) 1100
BpuMI CCSGG 3 cut(s) 602, 607, 922
BsaHI GRCGYC 1 cut(s) 282
BsaJI CCNNGG 1 cut(s) 442
Bsc4I CCNNNNNNNGG 6 cut(s) 53, 221, 443, 643, 846, 921
Bse1I ACTGG 2 cut(s) 70, 1023
Bse3DI GCAATG 2 cut(s) 416, 951
BseBI CCWGG 2 cut(s) 54, 235
BseDI CCNNGG 1 cut(s) 442
BseGI GGATG 4 cut(s) 391, 1005, 1084, 1190
BseLI CCNNNNNNNGG 6 cut(s) 53, 221, 443, 643, 846, 921
BseMI GCAATG 2 cut(s) 416, 951
BseMII CTCAG 2 cut(s) 294, 392
BseNI ACTGG 2 cut(s) 70, 1023
BseX3I CGGCCG 2 cut(s) 603, 649
BseXI GCAGC 1 cut(s) 362
Bsh1236I CGCG 3 cut(s) 410, 444, 750
Bsh1285I CGRYCG 2 cut(s) 606, 652
BshFI GGCC 6 cut(s) 238, 605, 651, 866, 1195, 1335
BshNI GGYRCC 2 cut(s) 43, 568
BsiEI CGRYCG 2 cut(s) 606, 652
BsiSI CCGG 5 cut(s) 222, 602, 606, 652, 922
BslFI GGGAC 1 cut(s) 689
BslI CCNNNNNNNGG 6 cut(s) 53, 221, 443, 643, 846, 921
BsmFI GGGAC 1 cut(s) 689
BsnI GGCC 6 cut(s) 238, 605, 651, 866, 1195, 1335
Bsp119I TTCGAA 1 cut(s) 1100
Bsp1286I GDGCHC 2 cut(s) 523, 612
Bsp143I GATC 3 cut(s) 56, 709, 917
BspACI CCGC 6 cut(s) 405, 408, 442, 444, 986, 1307
BspANI GGCC 6 cut(s) 238, 605, 651, 866, 1195, 1335
BspCNI CTCAG 2 cut(s) 295, 391
BspFNI CGCG 3 cut(s) 410, 444, 750
BspLI GGNNCC 8 cut(s) 45, 107, 239, 570, 600, 705, 930, 1234
BspMAI CTGCAG 1 cut(s) 38
BspMI ACCTGC 1 cut(s) 949
BspPI GGATC 2 cut(s) 64, 912
BspT104I TTCGAA 1 cut(s) 1100
BspT107I GGYRCC 2 cut(s) 43, 568
BspTI CTTAAG 1 cut(s) 670
BsrDI GCAATG 2 cut(s) 416, 951
BsrI ACTGG 2 cut(s) 70, 1023
BssECI CCNNGG 1 cut(s) 442
BssMI GATC 3 cut(s) 56, 709, 917
BssNI GRCGYC 1 cut(s) 282
Bst2UI CCWGG 2 cut(s) 54, 235
Bst4CI ACNGT 3 cut(s) 298, 430, 1122
Bst6I CTCTTC 1 cut(s) 154
BstACI GRCGYC 1 cut(s) 282
BstAFI CTTAAG 1 cut(s) 670
BstBI TTCGAA 1 cut(s) 1100
BstC8I GCNNGC 3 cut(s) 402, 697, 1333
BstDEI CTNAG 4 cut(s) 263, 303, 378, 767
BstDSI CCRYGG 1 cut(s) 442
BstF5I GGATG 4 cut(s) 391, 1005, 1084, 1190
BstFNI CGCG 3 cut(s) 410, 444, 750
BstHHI GCGC 2 cut(s) 752, 775
BstKTI GATC 3 cut(s) 59, 712, 920
BstMBI GATC 3 cut(s) 56, 709, 917
BstMCI CGRYCG 2 cut(s) 606, 652
BstMWI GCNNNNNNNGC 4 cut(s) 413, 1034, 1319, 1328
BstNI CCWGG 2 cut(s) 54, 235
BstNSI RCATGY 1 cut(s) 779
BstSCI CCNGG 5 cut(s) 52, 233, 600, 605, 920
BstSFI CTRYAG 1 cut(s) 34
BstUI CGCG 3 cut(s) 410, 444, 750
BstV1I GCAGC 1 cut(s) 362
BstV2I GAAGAC 2 cut(s) 723, 893
BstX2I RGATCY 1 cut(s) 917
BstYI RGATCY 1 cut(s) 917
BstZI CGGCCG 2 cut(s) 603, 649
BsuRI GGCC 6 cut(s) 238, 605, 651, 866, 1195, 1335
BtgI CCRYGG 1 cut(s) 442
BtgZI GCGATG 2 cut(s) 425, 789
BtsCI GGATG 4 cut(s) 391, 1005, 1084, 1190
BtsIMutI CAGTG 3 cut(s) 21, 426, 1118
BveI ACCTGC 1 cut(s) 949
Cac8I GCNNGC 3 cut(s) 402, 697, 1333
CaiI CAGNNNCTG 1 cut(s) 1049
CfoI GCGC 2 cut(s) 752, 775
Cfr13I GGNCC 6 cut(s) 237, 498, 598, 654, 703, 928
Cfr42I CCGCGG 1 cut(s) 445
CpoI CGGWCCG 1 cut(s) 654
CseI GACGC 1 cut(s) 290
Csp6I GTAC 2 cut(s) 164, 569
CspI CGGWCCG 1 cut(s) 654
CviAII CATG 4 cut(s) 466, 516, 776, 846
CviQI GTAC 2 cut(s) 164, 569
DdeI CTNAG 4 cut(s) 263, 303, 378, 767
DpnI GATC 3 cut(s) 58, 711, 919
DpnII GATC 3 cut(s) 56, 709, 917
DrdI GACNNNNNNGTC 1 cut(s) 587
DseDI GACNNNNNNGTC 1 cut(s) 587
EaeI YGGCCR 2 cut(s) 603, 649
EagI CGGCCG 2 cut(s) 603, 649
Eam1104I CTCTTC 1 cut(s) 154
EarI CTCTTC 1 cut(s) 154
EclXI CGGCCG 2 cut(s) 603, 649
Eco24I GRGCYC 2 cut(s) 523, 612
Eco47I GGWCC 5 cut(s) 498, 598, 654, 703, 928
Eco52I CGGCCG 2 cut(s) 603, 649
EcoO109I RGGNCCY 2 cut(s) 598, 703
EcoRII CCWGG 2 cut(s) 52, 233
EcoT38I GRGCYC 2 cut(s) 523, 612
FaeI CATG 4 cut(s) 469, 519, 779, 849
FaqI GGGAC 1 cut(s) 689
FatI CATG 4 cut(s) 465, 515, 775, 845
Fnu4HI GCNGC 3 cut(s) 351, 405, 408
FokI GGATG 4 cut(s) 398, 1012, 1091, 1197
FriOI GRGCYC 2 cut(s) 523, 612
Fsp4HI GCNGC 3 cut(s) 351, 405, 408
FspBI CTAG 1 cut(s) 371
GlaI GCGC 2 cut(s) 751, 774
GluI GCNGC 3 cut(s) 351, 405, 408
GsuI CTGGAG 2 cut(s) 610, 898
HaeIII GGCC 6 cut(s) 238, 605, 651, 866, 1195, 1335
HapII CCGG 5 cut(s) 222, 602, 606, 652, 922
HgaI GACGC 1 cut(s) 290
HhaI GCGC 2 cut(s) 752, 775
Hin1I GRCGYC 1 cut(s) 282
Hin1II CATG 4 cut(s) 469, 519, 779, 849
Hin6I GCGC 2 cut(s) 750, 773
HinP1I GCGC 2 cut(s) 750, 773
HincII GTYRAC 1 cut(s) 819
HindII GTYRAC 1 cut(s) 819
HindIII AAGCTT 2 cut(s) 667, 1057
HinfI GANTC 8 cut(s) 158, 245, 305, 447, 719, 724, 800, 911
HpaII CCGG 5 cut(s) 222, 602, 606, 652, 922
HphI GGTGA 5 cut(s) 51, 223, 286, 871, 1019
Hpy166II GTNNAC 2 cut(s) 744, 819
Hpy188I TCNGA 5 cut(s) 310, 458, 614, 799, 1249
Hpy188III TCNNGA 3 cut(s) 713, 915, 1109
Hpy8I GTNNAC 2 cut(s) 744, 819
Hpy99I CGWCG 1 cut(s) 284
HpyAV CCTTC 3 cut(s) 567, 856, 1185
HpyCH4III ACNGT 3 cut(s) 298, 430, 1122
HpyCH4IV ACGT 1 cut(s) 270
HpyF10VI GCNNNNNNNGC 4 cut(s) 413, 1034, 1319, 1328
HpyF3I CTNAG 4 cut(s) 263, 303, 378, 767
HpySE526I ACGT 1 cut(s) 270
Hsp92I GRCGYC 1 cut(s) 282
Hsp92II CATG 4 cut(s) 469, 519, 779, 849
HspAI GCGC 2 cut(s) 750, 773
KpnI GGTACC 1 cut(s) 572
KspI CCGCGG 1 cut(s) 445
Kzo9I GATC 3 cut(s) 56, 709, 917
LmnI GCTCC 3 cut(s) 111, 813, 1232
Lsp1109I GCAGC 1 cut(s) 362
LweI GCATC 2 cut(s) 301, 1309
MaeI CTAG 1 cut(s) 371
MaeII ACGT 1 cut(s) 270
MaeIII GTNAC 6 cut(s) 72, 338, 388, 778, 956, 1149
MalI GATC 3 cut(s) 58, 711, 919
MboI GATC 3 cut(s) 56, 709, 917
MboII GAAGA 9 cut(s) 31, 82, 141, 551, 728, 881, 898, 1022, 1306
MflI RGATCY 1 cut(s) 917
MhlI GDGCHC 2 cut(s) 523, 612
MluCI AATT 3 cut(s) 1038, 1090, 1103
MlyI GAGTC 4 cut(s) 239, 314, 713, 905
MmeI TCCRAC 4 cut(s) 226, 363, 906, 1261
MseI TTAA 1 cut(s) 671
MspA1I CMGCKG 1 cut(s) 444
MspCI CTTAAG 1 cut(s) 670
MspI CCGG 5 cut(s) 222, 602, 606, 652, 922
MspR9I CCNGG 5 cut(s) 54, 235, 602, 607, 922
MvaI CCWGG 2 cut(s) 54, 235
MvnI CGCG 3 cut(s) 410, 444, 750
MwoI GCNNNNNNNGC 4 cut(s) 413, 1034, 1319, 1328
NciI CCSGG 3 cut(s) 602, 607, 922
NdeII GATC 3 cut(s) 56, 709, 917
NlaIII CATG 4 cut(s) 469, 519, 779, 849
NlaIV GGNNCC 8 cut(s) 45, 107, 239, 570, 600, 705, 930, 1234
NmuCI GTSAC 4 cut(s) 72, 388, 778, 1149
NspI RCATGY 1 cut(s) 779
NspV TTCGAA 1 cut(s) 1100
PcsI WCGNNNNNNNCGW 2 cut(s) 276, 654
PfeI GAWTC 4 cut(s) 158, 447, 724, 800
PkrI GCNGC 3 cut(s) 352, 406, 409
PleI GAGTC 4 cut(s) 239, 313, 713, 905
PpsI GAGTC 4 cut(s) 239, 313, 713, 905
PpuMI RGGWCCY 2 cut(s) 598, 703
Psp5II RGGWCCY 2 cut(s) 598, 703
Psp6I CCWGG 2 cut(s) 52, 233
PspGI CCWGG 2 cut(s) 52, 233
PspN4I GGNNCC 8 cut(s) 45, 107, 239, 570, 600, 705, 930, 1234
PspPI GGNCC 6 cut(s) 237, 498, 598, 654, 703, 928
PspPPI RGGWCCY 2 cut(s) 598, 703
PstI CTGCAG 1 cut(s) 38
PstNI CAGNNNCTG 1 cut(s) 1049
PsuI RGATCY 1 cut(s) 917
RsaI GTAC 2 cut(s) 165, 570
RsaNI GTAC 2 cut(s) 164, 569
Rsr2I CGGWCCG 1 cut(s) 654
RsrII CGGWCCG 1 cut(s) 654
SacII CCGCGG 1 cut(s) 445
SaqAI TTAA 1 cut(s) 671
SatI GCNGC 3 cut(s) 351, 405, 408
Sau3AI GATC 3 cut(s) 56, 709, 917
Sau96I GGNCC 6 cut(s) 237, 498, 598, 654, 703, 928
SchI GAGTC 4 cut(s) 239, 314, 713, 905
ScrFI CCNGG 5 cut(s) 54, 235, 602, 607, 922
SduI GDGCHC 2 cut(s) 523, 612
SfaNI GCATC 2 cut(s) 301, 1309
SfcI CTRYAG 1 cut(s) 34
Sfr303I CCGCGG 1 cut(s) 445
SfuI TTCGAA 1 cut(s) 1100
SgrBI CCGCGG 1 cut(s) 445
SinI GGWCC 5 cut(s) 498, 598, 654, 703, 928
SmlI CTYRAG 1 cut(s) 670
SmoI CTYRAG 1 cut(s) 670
Sse9I AATT 3 cut(s) 1038, 1090, 1103
SsiI CCGC 6 cut(s) 405, 408, 442, 444, 986, 1307
SspMI CTAG 1 cut(s) 371
StyD4I CCNGG 5 cut(s) 52, 233, 600, 605, 920
TaaI ACNGT 3 cut(s) 298, 430, 1122
TaiI ACGT 1 cut(s) 273
TaqI TCGA 7 cut(s) 93, 321, 712, 722, 738, 1100, 1139
TaqII GACCGA 1 cut(s) 671
TasI AATT 3 cut(s) 1038, 1090, 1103
TauI GCSGC 2 cut(s) 407, 410
TfiI GAWTC 4 cut(s) 158, 447, 724, 800
Tru1I TTAA 1 cut(s) 671
Tru9I TTAA 1 cut(s) 671
TscAI CASTG 3 cut(s) 21, 433, 1125
TseFI GTSAC 4 cut(s) 72, 388, 778, 1149
TseI GCWGC 1 cut(s) 350
Tsp45I GTSAC 4 cut(s) 72, 388, 778, 1149
TspDTI ATGAA 2 cut(s) 552, 792
TspGWI ACGGA 2 cut(s) 98, 151
TspRI CASTG 3 cut(s) 21, 433, 1125
Vha464I CTTAAG 1 cut(s) 670
VpaK11BI GGWCC 5 cut(s) 498, 598, 654, 703, 928
XapI RAATTY 1 cut(s) 1103
XceI RCATGY 1 cut(s) 779
XcmI CCANNNNNNNNNTGG 1 cut(s) 922
XspI CTAG 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.