Rorug01G0015200

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000138
Physical Location & Seq
Reverse (-)
2598258 .. 2604876
6619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0015200.1

Sequence Viewer

Length: 1899 bp
ATGATGTTGGGTGGCAGCAAGGGCATATTGGAGACTACACATAATAACAACAGCATATATAAAAACAACTATAAAATAAAGAGCGGAGTGGAGTTGGTAATAAGAGAAGTGCGAATATCACTCCCGAAGATAAAGCCACCCACCACACGACACTACTTGGTTCACACAAACAAGACCAAGAACAAGAACAAGAACCAGAGCCAGAGGAGTGTCATCTGCTTGGCTACAGAAACCGCAGTTGTGATGGCGGAGGTGGTCGAGAAACCTCACGATGATGTGAAGGAGAAGCTGAAGAGCAACGGCATAGTGGTGCCGAATCCGAAGCCGAGCAAAGGCGTCACCTCCACACTGGTGGACACGGTTGAGAAGCTCATTGTCAAGTTGATGTACGACAGTTCTCAGCCTCACCACTATCTCGCCGGAAACTTTGCTCCGGTTATTGAGGAAACGCCTCCCACTAAGGACCTCAATGTCATCGGGCATCTTCCTGATTGCTTGAATGGAGAGTTTGTAAGGGTTGGCCCCAATCCCAAGTTTGCTCCAGTTGCTGGATATCACTGGTTTGATGGAGATGGTATGATTCATGGTATGCGGATCAAGGATGGAAAAGCAACATATGTCTCCCGCTATGTAAAGACATCGCGTCTTAAGCAAGAAGAGTACTTTGGAGGTGCCAAATTTATGAAGATCGGAGACCTTAAGGGGCTTTTTGGTTTACTCATGGTTTACATGCAGCAGCTGAGAGCTAAACTGAAAGTGTTCGATCTTTCATATGGACATGGGACAGGTAACACAGCTCTCATATATCACCATGGGAAACTTCTAGCTCTTTCAGAGGGAGACAAACCTTATGTTCTCAAAGTTCTGGAAGATGGAGATCTGCAAACAGTTGGCTTGTTGGATTATGACAAGAGATTGAAGCATTCCTTCACTGCTCATCCAAAGGTTGACCCTTTCACTGGGGAGATGTTTACATTTGGCTATTCGCATGATCCACCATATGTCACATACAGAGTAATTTCAAAGGATGGTTTCATGCATGATCCTATACCTATAACAGTACCAGCTCCTGTCATGATGCATGATTTTGCCATTACTGAGAACTATGCAATTTTCATGGATCTTCCCTTGTATTTCAGACCAAAGGAAATGGTTAAGGAAGGCAAGCTGATATTCTCATTTGATGAAACAAAAAAAGCTCGCTTTGGTGTCCTTCCACGTTATGCAAAGGATGATTTGCTAATCAGATGGTTTGAGCTTCCAAATTGCTTCATTTTCCATAATGCTAATGCTTGGGAGGAAGAGGACGAAGTTGTTTTAATGACATGCCGCCTTGAGAATCCAGATTTAGACATGGTCAATGGGCCTATCAAGAAAAAGCTTGACAACTTCAAAAATGAGCTGTATGAGATGAGATTCAACTTAAAAACCGGTTTAGCAACACAGAAGAAATTATCAGAATCAGCTGTAGATTTTCCTAGGGTGAATGAGAGCTACACTGGAAGGAAGCAACGCTATGTCTATGGAACCACACTGGATAGCATTGCGAAGGTGACAGGGATAGTCAAGTTTGATCTGCATGCTGCACCTGAGATTGGAAAAACGAAAATTGAGGTTGGAGGAAACGTCCAAGGCCTTTATGACCTGGGACCTGGTAGATTTGGTTCTGAGGCTATTTTTGTCCCTCGTGTTCCTGGTACTACTTCAGAAGAAGATGATGGCTACTTGATATTCTTTGTACATGATGAGAATACGGGAAAATCAGCAATTCATGTACTGGATGCAAAAACAATGTCCAGTGATCCTGTTGCAATTGTTGAGTTGCCCCACAGAGTTCCATATGGGTTCCATGCCTTCTTTGTGACAGAGGAGCAATTGCAAGAACAAGCAAAGTTCTAA

Protein Analysis

632

Amino Acids

71.35

Weight (kDa)

8.04

Isoelectric Point (pI)

31.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 143 - 621 8.4e-144 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 470
AccB1I GGYRCC 2 cut(s) 310, 671
AccB7I CCANNNNNTGG 1 cut(s) 548
AccBSI CCGCTC 1 cut(s) 84
AccII CGCG 1 cut(s) 643
AciI CCGC 6 cut(s) 84, 234, 248, 592, 625, 1330
AclWI GGATC 5 cut(s) 602, 986, 1037, 1128, 1796
AcsI RAATTY 1 cut(s) 677
AcuI CTGAAG 2 cut(s) 311, 1689
AcyI GRCGYC 1 cut(s) 336
AfaI GTAC 6 cut(s) 389, 662, 1062, 1699, 1740, 1776
AfiI CCNNNNNNNGG 4 cut(s) 332, 548, 959, 1595
AflII CTTAAG 2 cut(s) 647, 698
AgeI ACCGGT 1 cut(s) 1430
AgsI TTSAA 5 cut(s) 499, 919, 1023, 1393, 1420
AhdI GACNNNNNGTC 1 cut(s) 642
AjnI CCWGG 3 cut(s) 1644, 1651, 1693
AjuI GAANNNNNNNTTGG 2 cut(s) 648, 680
AleI CACNNNNGTG 1 cut(s) 350
Alw26I GTCTC 4 cut(s) 26, 625, 687, 834
AlwI GGATC 5 cut(s) 602, 986, 1037, 1128, 1796
AlwNI CAGNNNCTG 3 cut(s) 548, 739, 1070
AoxI GGCC 3 cut(s) 520, 1364, 1633
ApeKI GCWGC 4 cut(s) 15, 733, 736, 1583
ApoI RAATTY 1 cut(s) 677
ArsI GACNNNNNNTTYG 2 cut(s) 1778, 1810
AsiGI ACCGGT 1 cut(s) 1430
Asp700I GAANNNNTTC 1 cut(s) 758
AspA2I CCTAGG 1 cut(s) 1478
AspS9I GGNCC 4 cut(s) 463, 521, 1364, 1649
AsuHPI GGTGA 5 cut(s) 331, 398, 800, 1495, 1564
AvaII GGWCC 2 cut(s) 463, 1649
AvrII CCTAGG 1 cut(s) 1478
BanI GGYRCC 2 cut(s) 310, 671
BauI CACGAG 1 cut(s) 1686
BbvI GCAGC 4 cut(s) 27, 745, 748, 1570
BccI CCATC 8 cut(s) 238, 560, 566, 596, 866, 1022, 1242, 1712
BceAI ACGGC 1 cut(s) 316
BciT130I CCWGG 3 cut(s) 1646, 1653, 1695
BcoDI GTCTC 4 cut(s) 26, 625, 687, 834
BfaI CTAG 2 cut(s) 824, 1479
BfmI CTRYAG 2 cut(s) 225, 1467
BfrI CTTAAG 2 cut(s) 647, 698
BglII AGATCT 1 cut(s) 877
BisI GCNGC 5 cut(s) 16, 734, 737, 1330, 1584
BlnI CCTAGG 1 cut(s) 1478
BlsI GCNGC 5 cut(s) 17, 735, 738, 1331, 1585
BmcAI AGTACT 1 cut(s) 662
Bme1390I CCNGG 3 cut(s) 1646, 1653, 1695
Bme18I GGWCC 2 cut(s) 463, 1649
BmeRI GACNNNNNGTC 1 cut(s) 642
BmgT120I GGNCC 4 cut(s) 463, 521, 1364, 1649
BmiI GGNNCC 6 cut(s) 312, 523, 673, 1528, 1650, 1847
BmrFI CCNGG 3 cut(s) 1646, 1653, 1695
BmrI ACTGGG 1 cut(s) 969
BmsI GCATC 3 cut(s) 490, 1068, 1771
BmuI ACTGGG 1 cut(s) 969
BpmI CTGGAG 1 cut(s) 525
BpuEI CTTGAG 1 cut(s) 1355
BsaBI GATNNNNATC 1 cut(s) 876
BsaHI GRCGYC 1 cut(s) 336
BsaI GGTCTC 1 cut(s) 687
BsaJI CCNNGG 4 cut(s) 811, 1478, 1630, 1645
BsaWI WCCGGW 2 cut(s) 433, 1430
BsaXI ACNNNNNCTCC 4 cut(s) 495, 525, 1611, 1641
Bsc4I CCNNNNNNNGG 4 cut(s) 332, 548, 959, 1595
Bse118I RCCGGY 1 cut(s) 1430
Bse1I ACTGG 8 cut(s) 354, 542, 563, 964, 1504, 1539, 1782, 1797
Bse3DI GCAATG 1 cut(s) 1542
Bse8I GATNNNNATC 1 cut(s) 876
BseBI CCWGG 3 cut(s) 1646, 1653, 1695
BseDI CCNNGG 4 cut(s) 811, 1478, 1630, 1645
BseGI GGATG 5 cut(s) 607, 937, 1033, 1237, 1786
BseJI GATNNNNATC 1 cut(s) 876
BseLI CCNNNNNNNGG 4 cut(s) 332, 548, 959, 1595
BseMI GCAATG 1 cut(s) 1542
BseMII CTCAG 5 cut(s) 413, 731, 1089, 1581, 1659
BseNI ACTGG 8 cut(s) 354, 542, 563, 964, 1504, 1539, 1782, 1797
BseRI GAGGAG 2 cut(s) 220, 1883
BseXI GCAGC 4 cut(s) 27, 745, 748, 1570
BsgI GTGCAG 1 cut(s) 1569
Bsh1236I CGCG 1 cut(s) 643
BshFI GGCC 3 cut(s) 522, 1366, 1635
BshNI GGYRCC 2 cut(s) 310, 671
BshTI ACCGGT 1 cut(s) 1430
BsiSI CCGG 3 cut(s) 420, 434, 1431
BslFI GGGAC 3 cut(s) 796, 1662, 1667
BslI CCNNNNNNNGG 4 cut(s) 332, 548, 959, 1595
BsmAI GTCTC 4 cut(s) 26, 625, 687, 834
BsmFI GGGAC 3 cut(s) 796, 1662, 1667
BsmI GAATGC 1 cut(s) 922
BsnI GGCC 3 cut(s) 522, 1366, 1635
Bso31I GGTCTC 1 cut(s) 687
Bsp1407I TGTACA 1 cut(s) 1738
Bsp143I GATC 9 cut(s) 594, 687, 763, 877, 991, 1042, 1120, 1573, 1801
Bsp19I CCATGG 1 cut(s) 811
BspACI CCGC 6 cut(s) 84, 234, 248, 592, 625, 1330
BspANI GGCC 3 cut(s) 522, 1366, 1635
BspCNI CTCAG 5 cut(s) 412, 732, 1090, 1582, 1660
BspFNI CGCG 1 cut(s) 643
BspHI TCATGA 1 cut(s) 1074
BspLI GGNNCC 6 cut(s) 312, 523, 673, 1528, 1650, 1847
BspPI GGATC 5 cut(s) 602, 986, 1037, 1128, 1796
BspQI GCTCTTC 1 cut(s) 287
BspT107I GGYRCC 2 cut(s) 310, 671
BspTI CTTAAG 2 cut(s) 647, 698
BspTNI GGTCTC 1 cut(s) 687
BsrBI CCGCTC 1 cut(s) 84
BsrDI GCAATG 1 cut(s) 1542
BsrFI RCCGGY 1 cut(s) 1430
BsrGI TGTACA 1 cut(s) 1738
BsrI ACTGG 8 cut(s) 354, 542, 563, 964, 1504, 1539, 1782, 1797
BssAI RCCGGY 1 cut(s) 1430
BssECI CCNNGG 4 cut(s) 811, 1478, 1630, 1645
BssMI GATC 9 cut(s) 594, 687, 763, 877, 991, 1042, 1120, 1573, 1801
BssNI GRCGYC 1 cut(s) 336
BssSI CACGAG 1 cut(s) 1686
BssT1I CCWWGG 3 cut(s) 811, 1478, 1630
Bst2BI CACGAG 1 cut(s) 1686
Bst2UI CCWGG 3 cut(s) 1646, 1653, 1695
Bst4CI ACNGT 4 cut(s) 361, 395, 889, 1060
Bst6I CTCTTC 3 cut(s) 287, 651, 1296
BstACI GRCGYC 1 cut(s) 336
BstAFI CTTAAG 2 cut(s) 647, 698
BstAUI TGTACA 1 cut(s) 1738
BstC8I GCNNGC 3 cut(s) 1166, 1201, 1581
BstDEI CTNAG 6 cut(s) 399, 459, 740, 1098, 1590, 1668
BstDSI CCRYGG 1 cut(s) 811
BstF5I GGATG 5 cut(s) 607, 937, 1033, 1237, 1786
BstFNI CGCG 1 cut(s) 643
BstKTI GATC 9 cut(s) 597, 690, 766, 880, 994, 1045, 1123, 1576, 1804
BstMAI GTCTC 4 cut(s) 26, 625, 687, 834
BstMBI GATC 9 cut(s) 594, 687, 763, 877, 991, 1042, 1120, 1573, 1801
BstMWI GCNNNNNNNGC 3 cut(s) 21, 545, 649
BstNI CCWGG 3 cut(s) 1646, 1653, 1695
BstNSI RCATGY 3 cut(s) 733, 1329, 1583
BstSCI CCNGG 3 cut(s) 1644, 1651, 1693
BstSFI CTRYAG 2 cut(s) 225, 1467
BstUI CGCG 1 cut(s) 643
BstV1I GCAGC 4 cut(s) 27, 745, 748, 1570
BstX2I RGATCY 2 cut(s) 877, 1120
BstXI CCANNNNNNTGG 1 cut(s) 352
BstYI RGATCY 2 cut(s) 877, 1120
BsuRI GGCC 3 cut(s) 522, 1366, 1635
BtgI CCRYGG 1 cut(s) 811
BtgZI GCGATG 1 cut(s) 624
BtsCI GGATG 5 cut(s) 607, 937, 1033, 1237, 1786
BtsI GCAGTG 1 cut(s) 930
BtsIMutI CAGTG 7 cut(s) 347, 556, 930, 957, 1497, 1532, 1804
Cac8I GCNNGC 3 cut(s) 1166, 1201, 1581
CaiI CAGNNNCTG 3 cut(s) 548, 739, 1070
CciI TCATGA 1 cut(s) 1074
Cfr10I RCCGGY 1 cut(s) 1430
Cfr13I GGNCC 4 cut(s) 463, 521, 1364, 1649
CseI GACGC 2 cut(s) 325, 632
CsiI ACCWGGT 1 cut(s) 1651
Csp6I GTAC 6 cut(s) 388, 661, 1061, 1698, 1739, 1775
CspAI ACCGGT 1 cut(s) 1430
CviQI GTAC 6 cut(s) 388, 661, 1061, 1698, 1739, 1775
DdeI CTNAG 6 cut(s) 399, 459, 740, 1098, 1590, 1668
DpnI GATC 9 cut(s) 596, 689, 765, 879, 993, 1044, 1122, 1575, 1803
DpnII GATC 9 cut(s) 594, 687, 763, 877, 991, 1042, 1120, 1573, 1801
DrdI GACNNNNNNGTC 1 cut(s) 470
DriI GACNNNNNGTC 1 cut(s) 642
DseDI GACNNNNNNGTC 1 cut(s) 470
Eam1104I CTCTTC 3 cut(s) 287, 651, 1296
Eam1105I GACNNNNNGTC 1 cut(s) 642
EarI CTCTTC 3 cut(s) 287, 651, 1296
EciI GGCGGA 1 cut(s) 263
Eco130I CCWWGG 3 cut(s) 811, 1478, 1630
Eco147I AGGCCT 1 cut(s) 1635
Eco31I GGTCTC 1 cut(s) 687
Eco32I GATATC 1 cut(s) 554
Eco47I GGWCC 2 cut(s) 463, 1649
Eco57I CTGAAG 2 cut(s) 311, 1689
EcoO109I RGGNCCY 2 cut(s) 463, 1649
EcoRII CCWGG 3 cut(s) 1644, 1651, 1693
EcoRV GATATC 1 cut(s) 554
EcoT14I CCWWGG 3 cut(s) 811, 1478, 1630
EcoT22I ATGCAT 2 cut(s) 1041, 1083
ErhI CCWWGG 3 cut(s) 811, 1478, 1630
FalI AAGNNNNNCTT 2 cut(s) 911, 943
FaqI GGGAC 3 cut(s) 796, 1662, 1667
FauI CCCGC 1 cut(s) 632
FauNDI CATATG 4 cut(s) 616, 772, 1000, 1840
Fnu4HI GCNGC 5 cut(s) 16, 734, 737, 1330, 1584
FokI GGATG 5 cut(s) 614, 924, 1040, 1244, 1793
Fsp4HI GCNGC 5 cut(s) 16, 734, 737, 1330, 1584
FspBI CTAG 2 cut(s) 824, 1479
GluI GCNGC 5 cut(s) 16, 734, 737, 1330, 1584
GsuI CTGGAG 1 cut(s) 525
HaeIII GGCC 3 cut(s) 522, 1366, 1635
HapII CCGG 3 cut(s) 420, 434, 1431
HgaI GACGC 2 cut(s) 325, 632
Hin1I GRCGYC 1 cut(s) 336
HincII GTYRAC 1 cut(s) 949
HindII GTYRAC 1 cut(s) 949
HindIII AAGCTT 1 cut(s) 1379
HinfI GANTC 5 cut(s) 316, 580, 1339, 1416, 1460
HpaII CCGG 3 cut(s) 420, 434, 1431
HphI GGTGA 5 cut(s) 331, 398, 800, 1495, 1564
Hpy166II GTNNAC 6 cut(s) 163, 355, 716, 727, 949, 972
Hpy188I TCNGA 8 cut(s) 321, 692, 835, 1139, 1247, 1459, 1669, 1708
Hpy188III TCNNGA 8 cut(s) 124, 259, 269, 488, 866, 1075, 1343, 1372
Hpy8I GTNNAC 6 cut(s) 163, 355, 716, 727, 949, 972
HpyAV CCTTC 7 cut(s) 274, 937, 1154, 1223, 1497, 1543, 1864
HpyCH4III ACNGT 4 cut(s) 361, 395, 889, 1060
HpyCH4IV ACGT 2 cut(s) 1219, 1626
HpyF10VI GCNNNNNNNGC 3 cut(s) 21, 545, 649
HpyF3I CTNAG 6 cut(s) 399, 459, 740, 1098, 1590, 1668
HpySE526I ACGT 2 cut(s) 1219, 1626
Hsp92I GRCGYC 1 cut(s) 336
Kzo9I GATC 9 cut(s) 594, 687, 763, 877, 991, 1042, 1120, 1573, 1801
LguI GCTCTTC 1 cut(s) 287
LmnI GCTCC 4 cut(s) 436, 544, 1072, 1870
Lsp1109I GCAGC 4 cut(s) 27, 745, 748, 1570
LweI GCATC 3 cut(s) 490, 1068, 1771
MabI ACCWGGT 1 cut(s) 1651
MaeI CTAG 2 cut(s) 824, 1479
MaeII ACGT 2 cut(s) 1219, 1626
MaeIII GTNAC 5 cut(s) 337, 788, 1003, 1552, 1861
MalI GATC 9 cut(s) 596, 689, 765, 879, 993, 1044, 1122, 1575, 1803
MbiI CCGCTC 1 cut(s) 84
MboI GATC 9 cut(s) 594, 687, 763, 877, 991, 1042, 1120, 1573, 1801
MfeI CAATTG 2 cut(s) 1812, 1874
MflI RGATCY 2 cut(s) 877, 1120
MluCI AATT 9 cut(s) 677, 1017, 1110, 1264, 1451, 1608, 1767, 1812, 1874
MmeI TCCRAC 2 cut(s) 879, 1597
Mph1103I ATGCAT 2 cut(s) 1041, 1083
MroXI GAANNNNTTC 1 cut(s) 758
MseI TTAA 5 cut(s) 648, 699, 1155, 1319, 1424
MslI CAYNNNNRTG 3 cut(s) 273, 308, 350
MspA1I CMGCKG 2 cut(s) 739, 1466
MspCI CTTAAG 2 cut(s) 647, 698
MspI CCGG 3 cut(s) 420, 434, 1431
MspR9I CCNGG 3 cut(s) 1646, 1653, 1695
MunI CAATTG 2 cut(s) 1812, 1874
Mva1269I GAATGC 1 cut(s) 922
MvaI CCWGG 3 cut(s) 1646, 1653, 1695
MvnI CGCG 1 cut(s) 643
MwoI GCNNNNNNNGC 3 cut(s) 21, 545, 649
NcoI CCATGG 1 cut(s) 811
NdeI CATATG 4 cut(s) 616, 772, 1000, 1840
NdeII GATC 9 cut(s) 594, 687, 763, 877, 991, 1042, 1120, 1573, 1801
NlaIV GGNNCC 6 cut(s) 312, 523, 673, 1528, 1650, 1847
NmeAIII GCCGAG 1 cut(s) 351
NmuCI GTSAC 4 cut(s) 337, 1003, 1552, 1861
NsiI ATGCAT 2 cut(s) 1041, 1083
NspI RCATGY 3 cut(s) 733, 1329, 1583
OliI CACNNNNGTG 1 cut(s) 350
PaeI GCATGC 1 cut(s) 1583
PagI TCATGA 1 cut(s) 1074
PceI AGGCCT 1 cut(s) 1635
PciSI GCTCTTC 1 cut(s) 287
PctI GAATGC 1 cut(s) 922
PdmI GAANNNNTTC 1 cut(s) 758
PfeI GAWTC 5 cut(s) 316, 580, 1339, 1416, 1460
PflFI GACNNNGTC 1 cut(s) 1355
PflMI CCANNNNNTGG 1 cut(s) 548
PinAI ACCGGT 1 cut(s) 1430
PkrI GCNGC 5 cut(s) 17, 735, 738, 1331, 1585
PpuMI RGGWCCY 2 cut(s) 463, 1649
Psp5II RGGWCCY 2 cut(s) 463, 1649
Psp6I CCWGG 3 cut(s) 1644, 1651, 1693
PspGI CCWGG 3 cut(s) 1644, 1651, 1693
PspN4I GGNNCC 6 cut(s) 312, 523, 673, 1528, 1650, 1847
PspPI GGNCC 4 cut(s) 463, 521, 1364, 1649
PspPPI RGGWCCY 2 cut(s) 463, 1649
PsrI GAACNNNNNNTAC 2 cut(s) 1648, 1680
PstNI CAGNNNCTG 3 cut(s) 548, 739, 1070
PsuI RGATCY 2 cut(s) 877, 1120
PsyI GACNNNGTC 1 cut(s) 1355
PvuII CAGCTG 2 cut(s) 739, 1466
RsaI GTAC 6 cut(s) 389, 662, 1062, 1699, 1740, 1776
RsaNI GTAC 6 cut(s) 388, 661, 1061, 1698, 1739, 1775
RseI CAYNNNNRTG 3 cut(s) 273, 308, 350
SapI GCTCTTC 1 cut(s) 287
SaqAI TTAA 5 cut(s) 648, 699, 1155, 1319, 1424
SatI GCNGC 5 cut(s) 16, 734, 737, 1330, 1584
Sau3AI GATC 9 cut(s) 594, 687, 763, 877, 991, 1042, 1120, 1573, 1801
Sau96I GGNCC 4 cut(s) 463, 521, 1364, 1649
ScaI AGTACT 1 cut(s) 662
ScrFI CCNGG 3 cut(s) 1646, 1653, 1695
SexAI ACCWGGT 1 cut(s) 1651
SfaNI GCATC 3 cut(s) 490, 1068, 1771
SfcI CTRYAG 2 cut(s) 225, 1467
SinI GGWCC 2 cut(s) 463, 1649
SmiMI CAYNNNNRTG 3 cut(s) 273, 308, 350
SmlI CTYRAG 3 cut(s) 647, 698, 1334
SmoI CTYRAG 3 cut(s) 647, 698, 1334
SphI GCATGC 1 cut(s) 1583
Sse9I AATT 9 cut(s) 677, 1017, 1110, 1264, 1451, 1608, 1767, 1812, 1874
SseBI AGGCCT 1 cut(s) 1635
SsiI CCGC 6 cut(s) 84, 234, 248, 592, 625, 1330
SspMI CTAG 2 cut(s) 824, 1479
StuI AGGCCT 1 cut(s) 1635
StyD4I CCNGG 3 cut(s) 1644, 1651, 1693
StyI CCWWGG 3 cut(s) 811, 1478, 1630
TaaI ACNGT 4 cut(s) 361, 395, 889, 1060
TaiI ACGT 2 cut(s) 1222, 1629
TaqI TCGA 2 cut(s) 258, 762
TasI AATT 9 cut(s) 677, 1017, 1110, 1264, 1451, 1608, 1767, 1812, 1874
TatI WGTACW 3 cut(s) 660, 1738, 1774
TauI GCSGC 1 cut(s) 1332
TfiI GAWTC 5 cut(s) 316, 580, 1339, 1416, 1460
Tru1I TTAA 5 cut(s) 648, 699, 1155, 1319, 1424
Tru9I TTAA 5 cut(s) 648, 699, 1155, 1319, 1424
TscAI CASTG 7 cut(s) 354, 563, 937, 964, 1504, 1539, 1804
TseFI GTSAC 4 cut(s) 337, 1003, 1552, 1861
TseI GCWGC 4 cut(s) 15, 733, 736, 1583
Tsp45I GTSAC 4 cut(s) 337, 1003, 1552, 1861
TspDTI ATGAA 8 cut(s) 572, 698, 759, 1024, 1105, 1200, 1261, 1760
TspRI CASTG 7 cut(s) 354, 563, 937, 964, 1504, 1539, 1804
Tth111I GACNNNGTC 1 cut(s) 1355
Van91I CCANNNNNTGG 1 cut(s) 548
Vha464I CTTAAG 2 cut(s) 647, 698
VpaK11BI GGWCC 2 cut(s) 463, 1649
XapI RAATTY 1 cut(s) 677
XceI RCATGY 3 cut(s) 733, 1329, 1583
XmaJI CCTAGG 1 cut(s) 1478
XmnI GAANNNNTTC 1 cut(s) 758
XspI CTAG 2 cut(s) 824, 1479
ZrmI AGTACT 1 cut(s) 662
Zsp2I ATGCAT 2 cut(s) 1041, 1083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.