RLG00000030618

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
64525801 .. 64526781
981 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030618

Sequence Viewer

Length: 720 bp
ATGCACCATGCGATCCTCGATGGCAAAACATCAATCTCGTTTGTCAGGTCGTGGGCTCGTGCATGCAGCAAACAAATTCAAAGTGGCTTGTCCATTGGATCAGATATTTTGTTACCAGAGCAGCTCAAGCCATTATATGATAGAACGGTCATCTATGATCCGACTGGGCTCGGACTCGAATCCATCTACTTAAACGATTGGCAAAACTTGGATGGCCCCAACAACAGAAGCGTAAAGGTTTGGGAATTCAAAGTTCCACGAGATGACTCAGTTCGAAGCATCTTTGAGTTCACACGCGCACAGATACAAAGCCTAAGGCAGATGCAATTAGCGAAACTATATATAAAGGGTTTAGACAAGAATGGGGTTTTGAAAGGAGCCCACGAGGTTTACTTTTCGAAAACCAAGGACTTGTTTCAGGTTAAGGGGATATATTCTACTGCTGGTTCGCACCGATTTCAGATTTACAATACAAACTTTGGCTGGGGTAGGCCGAAAAAAGTTGAGGTGGTCTCTATAGATAGGACCGGAGCGATTTCAGTCTCCGATTCCAAGAATGGTGGTGGAGGTATAGAGATTGGGGTGGTTTTGAAAACAGATTGTATGGAAGCATTTGCTTCTCTATTTGCTTTCAGGGGTTTGTGGAAAGCACCGAGTCAGGGGTTGAGTATTACAGTTACTACAAATGTGGGTTCAGGGCGTGCTTGGCTATGTCGTTGA

Protein Analysis

240

Amino Acids

26.6

Weight (kDa)

9.58

Isoelectric Point (pI)

30.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 143 - 207 1.1e-07 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 297
AclWI GGATC 3 cut(s) 7, 106, 152
AcsI RAATTY 2 cut(s) 75, 245
AfiI CCNNNNNNNGG 1 cut(s) 659
AgsI TTSAA 4 cut(s) 80, 250, 373, 592
AluBI AGCT 1 cut(s) 124
AluI AGCT 1 cut(s) 124
Alw26I GTCTC 2 cut(s) 517, 547
AlwI GGATC 3 cut(s) 7, 106, 152
AoxI GGCC 2 cut(s) 214, 491
ApeKI GCWGC 2 cut(s) 66, 121
ApoI RAATTY 2 cut(s) 75, 245
AspLEI GCGC 1 cut(s) 299
AspS9I GGNCC 2 cut(s) 215, 525
AsuII TTCGAA 2 cut(s) 274, 398
AvaII GGWCC 1 cut(s) 525
AxyI CCTNAGG 1 cut(s) 314
BanII GRGCYC 3 cut(s) 58, 171, 382
BauI CACGAG 3 cut(s) 57, 258, 383
BbvI GCAGC 2 cut(s) 78, 133
BccI CCATC 3 cut(s) 14, 191, 206
BcoDI GTCTC 2 cut(s) 517, 547
BfmI CTRYAG 1 cut(s) 516
BisI GCNGC 2 cut(s) 67, 122
BlsI GCNGC 2 cut(s) 68, 123
Bme18I GGWCC 1 cut(s) 525
BmgT120I GGNCC 2 cut(s) 215, 525
BmiI GGNNCC 2 cut(s) 217, 379
BmrI ACTGGG 1 cut(s) 174
BmsI GCATC 2 cut(s) 288, 312
BmuI ACTGGG 1 cut(s) 174
BplI GAGNNNNNCTC 2 cut(s) 497, 529
Bpu14I TTCGAA 2 cut(s) 274, 398
BpuEI CTTGAG 1 cut(s) 110
BsaI GGTCTC 1 cut(s) 517
BsaJI CCNNGG 1 cut(s) 405
BsaWI WCCGGW 1 cut(s) 527
Bsc4I CCNNNNNNNGG 1 cut(s) 659
Bse1I ACTGG 1 cut(s) 169
Bse21I CCTNAGG 1 cut(s) 314
BseDI CCNNGG 1 cut(s) 405
BseGI GGATG 1 cut(s) 217
BseLI CCNNNNNNNGG 1 cut(s) 659
BseMII CTCAG 1 cut(s) 282
BseNI ACTGG 1 cut(s) 169
BseXI GCAGC 2 cut(s) 78, 133
BseYI CCCAGC 1 cut(s) 483
Bsh1236I CGCG 1 cut(s) 297
BshFI GGCC 2 cut(s) 216, 493
BsiSI CCGG 1 cut(s) 528
BslI CCNNNNNNNGG 1 cut(s) 659
BsmAI GTCTC 2 cut(s) 517, 547
BsnI GGCC 2 cut(s) 216, 493
Bso31I GGTCTC 1 cut(s) 517
Bsp119I TTCGAA 2 cut(s) 274, 398
Bsp1286I GDGCHC 3 cut(s) 58, 171, 382
Bsp143I GATC 3 cut(s) 12, 98, 157
BspANI GGCC 2 cut(s) 216, 493
BspCNI CTCAG 1 cut(s) 281
BspFNI CGCG 1 cut(s) 297
BspLI GGNNCC 2 cut(s) 217, 379
BspPI GGATC 3 cut(s) 7, 106, 152
BspT104I TTCGAA 2 cut(s) 274, 398
BspTNI GGTCTC 1 cut(s) 517
BsrI ACTGG 1 cut(s) 169
BssECI CCNNGG 1 cut(s) 405
BssMI GATC 3 cut(s) 12, 98, 157
BssSI CACGAG 3 cut(s) 57, 258, 383
BssT1I CCWWGG 1 cut(s) 405
Bst2BI CACGAG 3 cut(s) 57, 258, 383
Bst4CI ACNGT 2 cut(s) 148, 676
BstBI TTCGAA 2 cut(s) 274, 398
BstC8I GCNNGC 2 cut(s) 64, 702
BstDEI CTNAG 2 cut(s) 268, 314
BstF5I GGATG 1 cut(s) 217
BstFNI CGCG 1 cut(s) 297
BstHHI GCGC 1 cut(s) 299
BstKTI GATC 3 cut(s) 15, 101, 160
BstMAI GTCTC 2 cut(s) 517, 547
BstMBI GATC 3 cut(s) 12, 98, 157
BstMWI GCNNNNNNNGC 2 cut(s) 127, 706
BstNSI RCATGY 1 cut(s) 66
BstSFI CTRYAG 1 cut(s) 516
BstUI CGCG 1 cut(s) 297
BstV1I GCAGC 2 cut(s) 78, 133
Bsu36I CCTNAGG 1 cut(s) 314
BsuRI GGCC 2 cut(s) 216, 493
BtsCI GGATG 1 cut(s) 217
Cac8I GCNNGC 2 cut(s) 64, 702
CfoI GCGC 1 cut(s) 299
Cfr13I GGNCC 2 cut(s) 215, 525
CspCI CAANNNNNGTGG 2 cut(s) 541, 576
CviAII CATG 2 cut(s) 8, 63
DdeI CTNAG 2 cut(s) 268, 314
DpnI GATC 3 cut(s) 14, 100, 159
DpnII GATC 3 cut(s) 12, 98, 157
Eco130I CCWWGG 1 cut(s) 405
Eco24I GRGCYC 3 cut(s) 58, 171, 382
Eco31I GGTCTC 1 cut(s) 517
Eco47I GGWCC 1 cut(s) 525
Eco81I CCTNAGG 1 cut(s) 314
EcoRI GAATTC 1 cut(s) 245
EcoT14I CCWWGG 1 cut(s) 405
EcoT38I GRGCYC 3 cut(s) 58, 171, 382
ErhI CCWWGG 1 cut(s) 405
FaeI CATG 2 cut(s) 11, 66
FatI CATG 2 cut(s) 7, 62
Fnu4HI GCNGC 2 cut(s) 67, 122
FokI GGATG 1 cut(s) 224
FriOI GRGCYC 3 cut(s) 58, 171, 382
Fsp4HI GCNGC 2 cut(s) 67, 122
GlaI GCGC 1 cut(s) 298
GluI GCNGC 2 cut(s) 67, 122
GsaI CCCAGC 1 cut(s) 487
HaeIII GGCC 2 cut(s) 216, 493
HapII CCGG 1 cut(s) 528
HhaI GCGC 1 cut(s) 299
Hin1II CATG 2 cut(s) 11, 66
Hin6I GCGC 1 cut(s) 297
HinP1I GCGC 1 cut(s) 297
HinfI GANTC 5 cut(s) 174, 179, 266, 548, 655
HpaII CCGG 1 cut(s) 528
Hpy166II GTNNAC 2 cut(s) 291, 391
Hpy188I TCNGA 5 cut(s) 103, 162, 173, 462, 547
Hpy8I GTNNAC 2 cut(s) 291, 391
HpyCH4III ACNGT 2 cut(s) 148, 676
HpyCH4V TGCA 4 cut(s) 4, 62, 66, 325
HpyF10VI GCNNNNNNNGC 2 cut(s) 127, 706
HpyF3I CTNAG 2 cut(s) 268, 314
Hsp92II CATG 2 cut(s) 11, 66
HspAI GCGC 1 cut(s) 297
Kzo9I GATC 3 cut(s) 12, 98, 157
LmnI GCTCC 2 cut(s) 377, 530
Lsp1109I GCAGC 2 cut(s) 78, 133
LweI GCATC 2 cut(s) 288, 312
MaeIII GTNAC 2 cut(s) 111, 676
MalI GATC 3 cut(s) 14, 100, 159
MboI GATC 3 cut(s) 12, 98, 157
MhlI GDGCHC 3 cut(s) 58, 171, 382
MluCI AATT 3 cut(s) 75, 245, 326
MlyI GAGTC 3 cut(s) 168, 260, 664
MmeI TCCRAC 1 cut(s) 185
MnlI CCTC 4 cut(s) 26, 379, 499, 560
MseI TTAA 2 cut(s) 191, 423
MspI CCGG 1 cut(s) 528
MvnI CGCG 1 cut(s) 297
MwoI GCNNNNNNNGC 2 cut(s) 127, 706
NdeII GATC 3 cut(s) 12, 98, 157
NlaIII CATG 2 cut(s) 11, 66
NlaIV GGNNCC 2 cut(s) 217, 379
NspI RCATGY 1 cut(s) 66
NspV TTCGAA 2 cut(s) 274, 398
PaeI GCATGC 1 cut(s) 66
PfeI GAWTC 2 cut(s) 179, 548
PkrI GCNGC 2 cut(s) 68, 123
PleI GAGTC 3 cut(s) 168, 260, 663
PpsI GAGTC 3 cut(s) 168, 260, 663
PspFI CCCAGC 1 cut(s) 483
PspN4I GGNNCC 2 cut(s) 217, 379
PspPI GGNCC 2 cut(s) 215, 525
SaqAI TTAA 2 cut(s) 191, 423
SatI GCNGC 2 cut(s) 67, 122
Sau3AI GATC 3 cut(s) 12, 98, 157
Sau96I GGNCC 2 cut(s) 215, 525
SchI GAGTC 3 cut(s) 168, 260, 664
SduI GDGCHC 3 cut(s) 58, 171, 382
SetI ASST 7 cut(s) 50, 126, 240, 390, 423, 510, 571
SfaNI GCATC 2 cut(s) 288, 312
SfcI CTRYAG 1 cut(s) 516
SfuI TTCGAA 2 cut(s) 274, 398
SinI GGWCC 1 cut(s) 525
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
SphI GCATGC 1 cut(s) 66
Sse9I AATT 3 cut(s) 75, 245, 326
StyI CCWWGG 1 cut(s) 405
TaaI ACNGT 2 cut(s) 148, 676
TaqI TCGA 4 cut(s) 18, 177, 274, 398
TasI AATT 3 cut(s) 75, 245, 326
TfiI GAWTC 2 cut(s) 179, 548
Tru1I TTAA 2 cut(s) 191, 423
Tru9I TTAA 2 cut(s) 191, 423
TseI GCWGC 2 cut(s) 66, 121
VpaK11BI GGWCC 1 cut(s) 525
XapI RAATTY 2 cut(s) 75, 245
XceI RCATGY 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.