Rroxscaffold_4G00330620

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000138
Physical Location & Seq
Reverse (-)
64335487 .. 64339023
3537 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00330620.1

Sequence Viewer

Length: 1272 bp
ATGGCGCAACCAAACTCGGTGAAAATAGTGGAGATTTGCAGGGTGGCTCCAAAACCAGGCGCACCAGATCTGTTGTCCCTTCCACTGACCTACTTTGACTCGCTCTGGCTAAGGTTTCCACCCGTACAACGCCTTTACTTCTACGAATTAACATCTTCTTCCTCTTCTTCTTCCACTAGTAGTACTGATTCTGTAGTACTTGCCTATCTCAAAACCTCGCTATCTCTCACTCTCAAACACTTTGTACCTCTCGCCGGAAACCTAACTTGGCCTCAAGACTCCCACACACCCATTCTCAGCTATGCCCAAGGCGACGCCATTTCACTCACAGTAGCTGAGTCCGATGCTGATAATTTCGACCACCTTTCGAGCAACGACGTTTTTCTCGAATCCAAAGCTTACCATCCACTCGTTCCCCAGTTGGAGGCGTCTCATGAACGAGCTGCAGCCATAGCATTGCAAATAACCCTATTTCCTGGCCGTGGCTTTGCCATTGGAACAGCCATGCACCATGCCGTCCTTGATGGCAAAACATCAAACTCGTTTGTTAAGTCGTGGGCTCATGCATGCAGCAAGCAAATTGAGAATGGCTTTTCCATTGAATCAGATATTTCGTTACCGGAGCAGCTCAAGCCATTATATGACAGAACGGTCATCTATGACCCGACTGGGCTCGGACTCGAATCCATCTACTTAAACGATTGGCAAAACTTGGATGGCCCCAACAACAGAAGCTTAAAGGTTTGGGAATTGAAAGCTCCACCAGATGACTCAGTTCGAAGCATCTTTCAGTTCACACGCGCACAGATACAAACCCTAAGGCAGATGGTACTAGAAAAGGTTTCTGATCCAGTACATCTTCATTTGTCAACGTTTTCTCTAGCTTGTGCTTACACTTGGGTTTGTTTAGTCAAGGCACAAGGAATAGAAGCCGACAAAGTTTCAGTTCAAGCCTTTACCGTGGAGTGCAGGCCTCGCTTGGACCCTCCGGTACCTGAAAACTATTTTGGAAACTGCATGATGGGTGCGATGGGGTTTGCGAAAGCAAAGGAGTTATTGGGTGAAGATGGGTTGGTTGTAGCGGTCACAGCAATTAGTGAAACTATAAAGGGTTTGGACAAGAATGGGGTTTTGAAAGGGGCCAACGAGCTTTATTCTTCGAAAGTCAAGGACTTGATTCAGGCTGAGGGAATATATTCTACTGCTGGTGAGTCTCAACATGTGATTCCCCGAGACATTATATGGTATGTCCCCGCGTCATTAAAACAGTGA

Protein Analysis

423

Amino Acids

46.49

Weight (kDa)

5.58

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 9 - 392 8.8e-39 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 650
Acc65I GGTACC 1 cut(s) 991
AccB1I GGYRCC 1 cut(s) 991
AccII CGCG 2 cut(s) 801, 1256
AciI CCGC 2 cut(s) 1082, 1254
AclI AACGTT 1 cut(s) 872
AclWI GGATC 1 cut(s) 842
AcoI YGGCCR 1 cut(s) 478
AcyI GRCGYC 2 cut(s) 315, 428
AfaI GTAC 7 cut(s) 126, 184, 198, 246, 831, 855, 993
AfiI CCNNNNNNNGG 4 cut(s) 56, 254, 424, 482
AflIII ACRYGT 1 cut(s) 1219
AgsI TTSAA 4 cut(s) 602, 754, 950, 1135
AhlI ACTAGT 1 cut(s) 176
AjnI CCWGG 2 cut(s) 55, 475
AjuI GAANNNNNNNTTGG 4 cut(s) 250, 282, 990, 1022
AluBI AGCT 9 cut(s) 300, 335, 398, 443, 628, 735, 758, 884, 1150
AluI AGCT 9 cut(s) 300, 335, 398, 443, 628, 735, 758, 884, 1150
Alw26I GTCTC 3 cut(s) 435, 1218, 1227
AlwI GGATC 1 cut(s) 842
AlwNI CAGNNNCTG 1 cut(s) 335
Ama87I CYCGRG 1 cut(s) 1230
AoxI GGCC 5 cut(s) 269, 478, 718, 971, 1140
ApeKI GCWGC 4 cut(s) 443, 446, 570, 625
Asp700I GAANNNNTTC 1 cut(s) 1195
Asp718I GGTACC 1 cut(s) 991
AspLEI GCGC 3 cut(s) 7, 62, 803
AspS9I GGNCC 3 cut(s) 719, 982, 1140
AsuHPI GGTGA 3 cut(s) 31, 1073, 1220
AsuII TTCGAA 2 cut(s) 778, 1160
AvaI CYCGRG 1 cut(s) 1230
AvaII GGWCC 1 cut(s) 982
AxyI CCTNAGG 1 cut(s) 818
BanI GGYRCC 1 cut(s) 991
BanII GRGCYC 2 cut(s) 562, 675
BbvCI CCTCAGC 1 cut(s) 1185
BbvI GCAGC 4 cut(s) 430, 458, 582, 637
BccI CCATC 8 cut(s) 411, 518, 695, 710, 820, 1015, 1024, 1061
BceAI ACGGC 2 cut(s) 465, 500
BciT130I CCWGG 2 cut(s) 57, 477
BcoDI GTCTC 3 cut(s) 435, 1218, 1227
BcuI ACTAGT 1 cut(s) 176
BfaI CTAG 3 cut(s) 177, 833, 881
BfmI CTRYAG 2 cut(s) 192, 444
BglII AGATCT 1 cut(s) 67
BisI GCNGC 4 cut(s) 444, 447, 571, 626
BlsI GCNGC 4 cut(s) 445, 448, 572, 627
BmcAI AGTACT 2 cut(s) 184, 198
Bme1390I CCNGG 2 cut(s) 57, 477
Bme18I GGWCC 1 cut(s) 982
BmeT110I CYCGRG 1 cut(s) 1230
BmgT120I GGNCC 3 cut(s) 719, 982, 1140
BmiI GGNNCC 5 cut(s) 48, 721, 984, 993, 1141
BmrFI CCNGG 2 cut(s) 57, 477
BmrI ACTGGG 2 cut(s) 412, 678
BmsI GCATC 2 cut(s) 334, 792
BmuI ACTGGG 2 cut(s) 412, 678
Bpu10I CCTNAGC 2 cut(s) 110, 1185
Bpu14I TTCGAA 2 cut(s) 778, 1160
BpuEI CTTGAG 2 cut(s) 258, 614
BsaHI GRCGYC 2 cut(s) 315, 428
BsaJI CCNNGG 3 cut(s) 307, 481, 960
BsaWI WCCGGW 2 cut(s) 619, 988
Bsc4I CCNNNNNNNGG 4 cut(s) 56, 254, 424, 482
Bse1I ACTGG 3 cut(s) 418, 673, 851
Bse21I CCTNAGG 1 cut(s) 818
Bse3DI GCAATG 1 cut(s) 455
BseBI CCWGG 2 cut(s) 57, 477
BseDI CCNNGG 3 cut(s) 307, 481, 960
BseGI GGATG 2 cut(s) 403, 721
BseLI CCNNNNNNNGG 4 cut(s) 56, 254, 424, 482
BseMI GCAATG 1 cut(s) 455
BseMII CTCAG 4 cut(s) 310, 327, 786, 1176
BseNI ACTGG 3 cut(s) 418, 673, 851
BseXI GCAGC 4 cut(s) 430, 458, 582, 637
BsgI GTGCAG 1 cut(s) 988
Bsh1236I CGCG 2 cut(s) 801, 1256
BshFI GGCC 5 cut(s) 271, 480, 720, 973, 1142
BshNI GGYRCC 1 cut(s) 991
BsiHKCI CYCGRG 1 cut(s) 1230
BsiSI CCGG 3 cut(s) 255, 620, 989
BslFI GGGAC 2 cut(s) 61, 1235
BslI CCNNNNNNNGG 4 cut(s) 56, 254, 424, 482
BsmAI GTCTC 3 cut(s) 435, 1218, 1227
BsmBI CGTCTC 1 cut(s) 435
BsmFI GGGAC 2 cut(s) 61, 1235
BsnI GGCC 5 cut(s) 271, 480, 720, 973, 1142
BsoBI CYCGRG 1 cut(s) 1230
Bsp119I TTCGAA 2 cut(s) 778, 1160
Bsp1286I GDGCHC 2 cut(s) 562, 675
Bsp143I GATC 2 cut(s) 67, 847
BspACI CCGC 2 cut(s) 1082, 1254
BspANI GGCC 5 cut(s) 271, 480, 720, 973, 1142
BspCNI CTCAG 4 cut(s) 309, 328, 785, 1177
BspFNI CGCG 2 cut(s) 801, 1256
BspHI TCATGA 1 cut(s) 433
BspLI GGNNCC 5 cut(s) 48, 721, 984, 993, 1141
BspMAI CTGCAG 1 cut(s) 448
BspPI GGATC 1 cut(s) 842
BspT104I TTCGAA 2 cut(s) 778, 1160
BspT107I GGYRCC 1 cut(s) 991
BsrDI GCAATG 1 cut(s) 455
BsrI ACTGG 3 cut(s) 418, 673, 851
BssECI CCNNGG 3 cut(s) 307, 481, 960
BssMI GATC 2 cut(s) 67, 847
BssNI GRCGYC 2 cut(s) 315, 428
BssT1I CCWWGG 1 cut(s) 307
Bst2UI CCWGG 2 cut(s) 57, 477
Bst4CI ACNGT 4 cut(s) 331, 652, 961, 1269
Bst6I CTCTTC 1 cut(s) 169
BstACI GRCGYC 2 cut(s) 315, 428
BstBI TTCGAA 2 cut(s) 778, 1160
BstC8I GCNNGC 3 cut(s) 568, 575, 971
BstDEI CTNAG 6 cut(s) 110, 296, 336, 772, 818, 1185
BstDSI CCRYGG 2 cut(s) 481, 960
BstF5I GGATG 2 cut(s) 403, 721
BstFNI CGCG 2 cut(s) 801, 1256
BstHHI GCGC 3 cut(s) 7, 62, 803
BstKTI GATC 2 cut(s) 70, 850
BstMAI GTCTC 3 cut(s) 435, 1218, 1227
BstMBI GATC 2 cut(s) 67, 847
BstMWI GCNNNNNNNGC 4 cut(s) 452, 631, 975, 1088
BstNI CCWGG 2 cut(s) 57, 477
BstNSI RCATGY 2 cut(s) 570, 1223
BstSCI CCNGG 2 cut(s) 55, 475
BstSFI CTRYAG 2 cut(s) 192, 444
BstUI CGCG 2 cut(s) 801, 1256
BstV1I GCAGC 4 cut(s) 430, 458, 582, 637
BstX2I RGATCY 1 cut(s) 67
BstYI RGATCY 1 cut(s) 67
Bsu36I CCTNAGG 1 cut(s) 818
BsuRI GGCC 5 cut(s) 271, 480, 720, 973, 1142
BtgI CCRYGG 2 cut(s) 481, 960
BtgZI GCGATG 1 cut(s) 1043
BtsCI GGATG 2 cut(s) 403, 721
BtsIMutI CAGTG 1 cut(s) 83
Cac8I GCNNGC 3 cut(s) 568, 575, 971
CaiI CAGNNNCTG 1 cut(s) 335
CciI TCATGA 1 cut(s) 433
CfoI GCGC 3 cut(s) 7, 62, 803
Cfr13I GGNCC 3 cut(s) 719, 982, 1140
CseI GACGC 3 cut(s) 323, 417, 1245
Csp6I GTAC 7 cut(s) 125, 183, 197, 245, 830, 854, 992
CviAII CATG 7 cut(s) 434, 505, 512, 563, 567, 1018, 1220
CviQI GTAC 7 cut(s) 125, 183, 197, 245, 830, 854, 992
DdeI CTNAG 6 cut(s) 110, 296, 336, 772, 818, 1185
DpnI GATC 2 cut(s) 69, 849
DpnII GATC 2 cut(s) 67, 847
DrdI GACNNNNNNGTC 1 cut(s) 650
DseDI GACNNNNNNGTC 1 cut(s) 650
EaeI YGGCCR 1 cut(s) 478
Eam1104I CTCTTC 1 cut(s) 169
EarI CTCTTC 1 cut(s) 169
Eco130I CCWWGG 1 cut(s) 307
Eco147I AGGCCT 1 cut(s) 973
Eco24I GRGCYC 2 cut(s) 562, 675
Eco47I GGWCC 1 cut(s) 982
Eco81I CCTNAGG 1 cut(s) 818
Eco88I CYCGRG 1 cut(s) 1230
EcoRII CCWGG 2 cut(s) 55, 475
EcoT14I CCWWGG 1 cut(s) 307
EcoT22I ATGCAT 1 cut(s) 568
EcoT38I GRGCYC 2 cut(s) 562, 675
ErhI CCWWGG 1 cut(s) 307
Esp3I CGTCTC 1 cut(s) 435
FaeI CATG 7 cut(s) 437, 508, 515, 566, 570, 1021, 1223
FaqI GGGAC 2 cut(s) 61, 1235
FatI CATG 7 cut(s) 433, 504, 511, 562, 566, 1017, 1219
FauI CCCGC 1 cut(s) 1261
Fnu4HI GCNGC 4 cut(s) 444, 447, 571, 626
FokI GGATG 2 cut(s) 390, 728
FriOI GRGCYC 2 cut(s) 562, 675
Fsp4HI GCNGC 4 cut(s) 444, 447, 571, 626
FspBI CTAG 3 cut(s) 177, 833, 881
GlaI GCGC 3 cut(s) 6, 61, 802
GluI GCNGC 4 cut(s) 444, 447, 571, 626
HaeIII GGCC 5 cut(s) 271, 480, 720, 973, 1142
HapII CCGG 3 cut(s) 255, 620, 989
HgaI GACGC 3 cut(s) 323, 417, 1245
HhaI GCGC 3 cut(s) 7, 62, 803
Hin1I GRCGYC 2 cut(s) 315, 428
Hin1II CATG 7 cut(s) 437, 508, 515, 566, 570, 1021, 1223
Hin6I GCGC 3 cut(s) 5, 60, 801
HinP1I GCGC 3 cut(s) 5, 60, 801
HincII GTYRAC 1 cut(s) 870
HindII GTYRAC 1 cut(s) 870
HindIII AAGCTT 2 cut(s) 396, 733
HpaII CCGG 3 cut(s) 255, 620, 989
HphI GGTGA 3 cut(s) 31, 1073, 1220
Hpy166II GTNNAC 2 cut(s) 795, 870
Hpy188I TCNGA 4 cut(s) 343, 607, 677, 847
Hpy188III TCNNGA 3 cut(s) 275, 386, 434
Hpy8I GTNNAC 2 cut(s) 795, 870
Hpy99I CGWCG 2 cut(s) 317, 380
HpyAV CCTTC 1 cut(s) 89
HpyCH4III ACNGT 4 cut(s) 331, 652, 961, 1269
HpyCH4IV ACGT 2 cut(s) 378, 872
HpyCH4V TGCA 8 cut(s) 39, 446, 460, 508, 566, 570, 969, 1017
HpyF10VI GCNNNNNNNGC 4 cut(s) 452, 631, 975, 1088
HpyF3I CTNAG 6 cut(s) 110, 296, 336, 772, 818, 1185
HpySE526I ACGT 2 cut(s) 378, 872
Hsp92I GRCGYC 2 cut(s) 315, 428
Hsp92II CATG 7 cut(s) 437, 508, 515, 566, 570, 1021, 1223
HspAI GCGC 3 cut(s) 5, 60, 801
KpnI GGTACC 1 cut(s) 995
Kzo9I GATC 2 cut(s) 67, 847
LmnI GCTCC 3 cut(s) 52, 622, 763
Lsp1109I GCAGC 4 cut(s) 430, 458, 582, 637
LweI GCATC 2 cut(s) 334, 792
MaeI CTAG 3 cut(s) 177, 833, 881
MaeII ACGT 2 cut(s) 378, 872
MaeIII GTNAC 2 cut(s) 615, 1084
MalI GATC 2 cut(s) 69, 849
MboI GATC 2 cut(s) 67, 847
MboII GAAGA 8 cut(s) 147, 150, 156, 159, 162, 851, 1076, 1149
MflI RGATCY 1 cut(s) 67
MhlI GDGCHC 2 cut(s) 562, 675
MluCI AATT 5 cut(s) 146, 352, 579, 749, 1092
MlyI GAGTC 6 cut(s) 92, 272, 347, 672, 764, 1220
MmeI TCCRAC 1 cut(s) 402
MnlI CCTC 8 cut(s) 172, 226, 258, 282, 418, 984, 996, 1180
Mph1103I ATGCAT 1 cut(s) 568
MroXI GAANNNNTTC 1 cut(s) 1195
MseI TTAA 5 cut(s) 149, 549, 695, 737, 1262
MspI CCGG 3 cut(s) 255, 620, 989
MspR9I CCNGG 2 cut(s) 57, 477
MvaI CCWGG 2 cut(s) 57, 477
MvnI CGCG 2 cut(s) 801, 1256
MwoI GCNNNNNNNGC 4 cut(s) 452, 631, 975, 1088
NdeII GATC 2 cut(s) 67, 847
NlaIII CATG 7 cut(s) 437, 508, 515, 566, 570, 1021, 1223
NlaIV GGNNCC 5 cut(s) 48, 721, 984, 993, 1141
NmuCI GTSAC 1 cut(s) 1084
NsiI ATGCAT 1 cut(s) 568
NspI RCATGY 2 cut(s) 570, 1223
NspV TTCGAA 2 cut(s) 778, 1160
PaeI GCATGC 1 cut(s) 570
PagI TCATGA 1 cut(s) 433
PceI AGGCCT 1 cut(s) 973
PciI ACATGT 1 cut(s) 1219
PcsI WCGNNNNNNNCGW 1 cut(s) 384
PdmI GAANNNNTTC 1 cut(s) 1195
PfeI GAWTC 6 cut(s) 188, 389, 602, 683, 1177, 1225
PkrI GCNGC 4 cut(s) 445, 448, 572, 627
PleI GAGTC 6 cut(s) 92, 272, 346, 672, 764, 1219
PpsI GAGTC 6 cut(s) 92, 272, 346, 672, 764, 1219
PscI ACATGT 1 cut(s) 1219
Psp1406I AACGTT 1 cut(s) 872
Psp6I CCWGG 2 cut(s) 55, 475
PspGI CCWGG 2 cut(s) 55, 475
PspN4I GGNNCC 5 cut(s) 48, 721, 984, 993, 1141
PspPI GGNCC 3 cut(s) 719, 982, 1140
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 1 cut(s) 67
RsaI GTAC 7 cut(s) 126, 184, 198, 246, 831, 855, 993
RsaNI GTAC 7 cut(s) 125, 183, 197, 245, 830, 854, 992
SaqAI TTAA 5 cut(s) 149, 549, 695, 737, 1262
SatI GCNGC 4 cut(s) 444, 447, 571, 626
Sau3AI GATC 2 cut(s) 67, 847
Sau96I GGNCC 3 cut(s) 719, 982, 1140
ScaI AGTACT 2 cut(s) 184, 198
SchI GAGTC 6 cut(s) 92, 272, 347, 672, 764, 1220
ScrFI CCNGG 2 cut(s) 57, 477
SduI GDGCHC 2 cut(s) 562, 675
SfaNI GCATC 2 cut(s) 334, 792
SfcI CTRYAG 2 cut(s) 192, 444
SfuI TTCGAA 2 cut(s) 778, 1160
SinI GGWCC 1 cut(s) 982
SmlI CTYRAG 2 cut(s) 273, 629
SmoI CTYRAG 2 cut(s) 273, 629
SpeI ACTAGT 1 cut(s) 176
SphI GCATGC 1 cut(s) 570
Sse9I AATT 5 cut(s) 146, 352, 579, 749, 1092
SseBI AGGCCT 1 cut(s) 973
SsiI CCGC 2 cut(s) 1082, 1254
SspMI CTAG 3 cut(s) 177, 833, 881
StuI AGGCCT 1 cut(s) 973
StyD4I CCNGG 2 cut(s) 55, 475
StyI CCWWGG 1 cut(s) 307
TaaI ACNGT 4 cut(s) 331, 652, 961, 1269
TaiI ACGT 2 cut(s) 381, 875
TaqI TCGA 6 cut(s) 357, 368, 387, 681, 778, 1160
TasI AATT 5 cut(s) 146, 352, 579, 749, 1092
TatI WGTACW 3 cut(s) 182, 196, 853
TfiI GAWTC 6 cut(s) 188, 389, 602, 683, 1177, 1225
Tru1I TTAA 5 cut(s) 149, 549, 695, 737, 1262
Tru9I TTAA 5 cut(s) 149, 549, 695, 737, 1262
TscAI CASTG 1 cut(s) 90
TseFI GTSAC 1 cut(s) 1084
TseI GCWGC 4 cut(s) 443, 446, 570, 625
Tsp45I GTSAC 1 cut(s) 1084
TspDTI ATGAA 2 cut(s) 450, 851
TspRI CASTG 1 cut(s) 90
VpaK11BI GGWCC 1 cut(s) 982
XceI RCATGY 2 cut(s) 570, 1223
XmnI GAANNNNTTC 1 cut(s) 1195
XspI CTAG 3 cut(s) 177, 833, 881
ZrmI AGTACT 2 cut(s) 184, 198
Zsp2I ATGCAT 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.