Rmu_co8406929.1_g000001

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8406929.1
Physical Location & Seq
Reverse (-)
842 .. 1294
453 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8406929.1_g000001.1.cds

Sequence Viewer

Length: 453 bp
ctggttcttgcggtggacgctagggctcgcttggaccctccgataccagcaacgtattttgggaactgcattgtgggtcgtgtagcaattgcagaaacaaaagggctattgggagaagatggcttggttgtggcattaagtgcaattactgaagctttgaagagtttggaaaaaattgggatcttgaatggggcagagtcgtgggtgtcaaacttcattgatttttcacagtatgagagagtgttttcggtggcaggttcgcaacggtttgaggtttatgatactgatttcggatgggggagaccgaagaggactgaggtggtttccataggtaagacaggagccttctctctttcagctagcaacaatgacggtggagctgttgaggttgggttggttctgaagaaacagtatatgaaggcttttgcttctttatttgccgatgcaatttaa

Protein Analysis

150

Amino Acids

16.02

Weight (kDa)

5.18

Isoelectric Point (pI)

15.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 245
AciI CCGC 1 cut(s) 11
AclWI GGATC 1 cut(s) 188
AcuI CTGAAG 2 cut(s) 171, 422
AgsI TTSAA 2 cut(s) 160, 187
AluBI AGCT 3 cut(s) 155, 359, 380
AluI AGCT 3 cut(s) 155, 359, 380
Alw26I GTCTC 1 cut(s) 295
AlwI GGATC 1 cut(s) 188
AspS9I GGNCC 1 cut(s) 34
AsuNHI GCTAGC 1 cut(s) 359
AvaII GGWCC 1 cut(s) 34
BanII GRGCYC 1 cut(s) 28
BccI CCATC 2 cut(s) 113, 288
BcoDI GTCTC 1 cut(s) 295
BfaI CTAG 2 cut(s) 21, 360
BfuAI ACCTGC 1 cut(s) 245
Bme18I GGWCC 1 cut(s) 34
BmgT120I GGNCC 1 cut(s) 34
BmiI GGNNCC 2 cut(s) 36, 343
BmsI GCATC 1 cut(s) 433
BmtI GCTAGC 1 cut(s) 363
BsaI GGTCTC 1 cut(s) 295
BseGI GGATG 1 cut(s) 299
BseMII CTCAG 1 cut(s) 306
BsmAI GTCTC 1 cut(s) 295
Bso31I GGTCTC 1 cut(s) 295
Bsp1286I GDGCHC 1 cut(s) 28
Bsp143I GATC 1 cut(s) 180
BspACI CCGC 1 cut(s) 11
BspCNI CTCAG 1 cut(s) 307
BspLI GGNNCC 2 cut(s) 36, 343
BspMI ACCTGC 1 cut(s) 245
BspOI GCTAGC 1 cut(s) 363
BspPI GGATC 1 cut(s) 188
BspTNI GGTCTC 1 cut(s) 295
BssMI GATC 1 cut(s) 180
Bst4CI ACNGT 4 cut(s) 231, 267, 374, 411
Bst6I CTCTTC 2 cut(s) 155, 302
BstAPI GCANNNNNTGC 1 cut(s) 140
BstC8I GCNNGC 2 cut(s) 28, 361
BstDEI CTNAG 1 cut(s) 315
BstF5I GGATG 1 cut(s) 299
BstKTI GATC 1 cut(s) 183
BstMAI GTCTC 1 cut(s) 295
BstMBI GATC 1 cut(s) 180
BstMWI GCNNNNNNNGC 2 cut(s) 17, 140
BstX2I RGATCY 1 cut(s) 180
BstYI RGATCY 1 cut(s) 180
BtsCI GGATG 1 cut(s) 299
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 2 cut(s) 28, 361
Cfr13I GGNCC 1 cut(s) 34
CseI GACGC 1 cut(s) 26
CspCI CAANNNNNGTGG 2 cut(s) 355, 390
CviJI RGCY 8 cut(s) 26, 106, 123, 155, 344, 359, 380, 422
CviKI_1 RGCY 8 cut(s) 26, 106, 123, 155, 344, 359, 380, 422
DdeI CTNAG 1 cut(s) 315
DpnI GATC 1 cut(s) 182
DpnII GATC 1 cut(s) 180
Eam1104I CTCTTC 2 cut(s) 155, 302
EarI CTCTTC 2 cut(s) 155, 302
Eco24I GRGCYC 1 cut(s) 28
Eco31I GGTCTC 1 cut(s) 295
Eco47I GGWCC 1 cut(s) 34
Eco57I CTGAAG 2 cut(s) 171, 422
EcoT38I GRGCYC 1 cut(s) 28
FaiI YATR 5 cut(s) 234, 279, 329, 414, 416
FokI GGATG 1 cut(s) 306
FriOI GRGCYC 1 cut(s) 28
FspBI CTAG 2 cut(s) 21, 360
HgaI GACGC 1 cut(s) 26
HindIII AAGCTT 1 cut(s) 153
HinfI GANTC 1 cut(s) 197
Hpy166II GTNNAC 1 cut(s) 16
Hpy188I TCNGA 3 cut(s) 42, 293, 402
Hpy188III TCNNGA 1 cut(s) 184
Hpy8I GTNNAC 1 cut(s) 16
HpyAV CCTTC 2 cut(s) 355, 412
HpyCH4III ACNGT 4 cut(s) 231, 267, 374, 411
HpyCH4IV ACGT 1 cut(s) 53
HpyCH4V TGCA 4 cut(s) 69, 92, 143, 446
HpyF10VI GCNNNNNNNGC 2 cut(s) 17, 140
HpyF3I CTNAG 1 cut(s) 315
HpySE526I ACGT 1 cut(s) 53
Kzo9I GATC 1 cut(s) 180
LmnI GCTCC 2 cut(s) 341, 377
LpnPI CCDG 3 cut(s) 60, 240, 324
LweI GCATC 1 cut(s) 433
MaeI CTAG 2 cut(s) 21, 360
MaeII ACGT 1 cut(s) 53
MalI GATC 1 cut(s) 182
MboI GATC 1 cut(s) 180
MboII GAAGA 4 cut(s) 128, 172, 319, 415
MfeI CAATTG 1 cut(s) 87
MflI RGATCY 1 cut(s) 180
MhlI GDGCHC 1 cut(s) 28
MluCI AATT 4 cut(s) 87, 144, 174, 447
MlyI GAGTC 1 cut(s) 206
MnlI CCTC 5 cut(s) 48, 265, 303, 310, 379
MseI TTAA 2 cut(s) 137, 451
MunI CAATTG 1 cut(s) 87
MwoI GCNNNNNNNGC 2 cut(s) 17, 140
NdeII GATC 1 cut(s) 180
NheI GCTAGC 1 cut(s) 359
NlaIV GGNNCC 2 cut(s) 36, 343
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
PspN4I GGNNCC 2 cut(s) 36, 343
PspPI GGNCC 1 cut(s) 34
PsuI RGATCY 1 cut(s) 180
SaqAI TTAA 2 cut(s) 137, 451
Sau3AI GATC 1 cut(s) 180
Sau96I GGNCC 1 cut(s) 34
SchI GAGTC 1 cut(s) 206
SduI GDGCHC 1 cut(s) 28
SetI ASST 9 cut(s) 56, 157, 259, 276, 321, 334, 361, 382, 390
SfaNI GCATC 1 cut(s) 433
SinI GGWCC 1 cut(s) 34
Sse9I AATT 4 cut(s) 87, 144, 174, 447
SsiI CCGC 1 cut(s) 11
SspMI CTAG 2 cut(s) 21, 360
TaaI ACNGT 4 cut(s) 231, 267, 374, 411
TaiI ACGT 1 cut(s) 56
TaqII GACCGA 1 cut(s) 319
TasI AATT 4 cut(s) 87, 144, 174, 447
Tru1I TTAA 2 cut(s) 137, 451
Tru9I TTAA 2 cut(s) 137, 451
TspDTI ATGAA 2 cut(s) 205, 431
VpaK11BI GGWCC 1 cut(s) 34
XspI CTAG 2 cut(s) 21, 360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.