Rroxscaffold_2G00085630

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000138
Physical Location & Seq
Reverse (-)
7899981 .. 7902078
2098 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00085630.1

Sequence Viewer

Length: 1389 bp
ATGTGTCTAGTTAAAGCTTCTTCAATATCCAGTCTTTCTCAATCTGAGGTAATGGCAAACTTATCAGTGAAGAAAGTTGAGGTCTGCAGGGTGGCACCAAAACCAGGTTCATCAGAGAACCAGTCACTTCCTCTAACATTCTTCGACTTATTCTGGCTCCGTTTTCAACCCGTAGAACGCCTCTACTTTTACCAAACCTCTTCCACCGATTCCGTACTTTCCAAACTCAAAACCTCCCTATCTCTCACTCTCCAACACTTCCTACCTCTCGCCGGAAACCTCACCTGGCTCCAAGACTCCCTCAAACCCGTTCTAAGCTACGTTCAAGGCGACGCCGTTTCACTCACCGTAGCTGAGTCCGATGCAGATTTCGACCACCTCATAAACAGTATCCCTCTTGCAGCCCAAGATTTCAGTCCTCTTGTTCCTCGGTTGGATGTGACTGATGAGCGAGCCGCCGCGATGGCATTGCAAATCACTGTTTACCCCAACCGCGGATTCTCCATTGGAACGGCCATGCACCACGCAATCCTTGACGGCAAAACTTCAACCTCGTTTGTCAAAGCATGGGCTCATATATGCAAACATGAAGAAGCACAAGCTCTGCCTTCGTCTTTGGTACCCTTCTACGACAGAACGGTCGTCAAGGACCCGGCCGGGCTCGAAGAACTCTACTCTGTCCATCACCAAAACAAGGACGGCCGGACCGACAACAGAAGCTTAAGCATTGTCTCCTACCGTAAAGCTTCAGATCAAGAAGACTTGATTCGGGGCACATTCGAGTTCACTCGCGCATTAATCCAAACACTTAGACGGCATGTCATATCTAAAATGGCTTCTGATTCAACGCTCCACTTGTCAACTTTTTCTCTGGTCTATGCCTACACATGGGTTTGTATGGTGAAGGCCGAAGAAATCAAAGGGGAGAAGACGGCAGTCATCGTCCCGGTGGACTCCAGGTCCCGGTTGGACCCTCCAATACCTGCAACGTATTTTGGTAACTGCGTAGTGGGTCGTGTAGCAGTTGCAGAAACAAAAGGGTTATTGGGTCAAGATGGATTGGTTGTAGCTGTGAAAGCAATCACAGAAGCTTTAAGAAGCTTGGAGAAAGGGGTTTTGGATGGGGCAGAGAATTGGGTTTCGAAATTTCTCGATTTTTCGCTGTATGATAGGATATATTCGATTGCAGGGTCACATAGGTTTGAGGTTTATGATACCGATTTTGGATGGGGAAGGCCGAAAAGGGTTGAGGTAATCTCCATTGATAAGACGGGAGCCATTTCTCTTTCGGATAGTAAGAATGGTGGTGGAGGTGTTGAGGTTGGCGTGGTTTTGAAGAAACAGTATATGGAGGCTTTCGATGCTCTGTTTGCTAGCCCAGTGCATTAG

Protein Analysis

462

Amino Acids

50.92

Weight (kDa)

6.32

Isoelectric Point (pI)

44.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 24 - 454 2.3e-52 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 638
Acc36I ACCTGC 1 cut(s) 991
Acc65I GGTACC 1 cut(s) 619
AccB1I GGYRCC 2 cut(s) 94, 619
AccII CGCG 3 cut(s) 461, 495, 792
AciI CCGC 4 cut(s) 456, 459, 493, 495
AcoI YGGCCR 3 cut(s) 513, 654, 700
AcsI RAATTY 1 cut(s) 1145
AcuI CTGAAG 1 cut(s) 732
AcyI GRCGYC 1 cut(s) 333
AfaI GTAC 2 cut(s) 216, 621
AfiI CCNNNNNNNGG 6 cut(s) 104, 272, 494, 694, 888, 963
AflII CTTAAG 1 cut(s) 721
AgsI TTSAA 6 cut(s) 24, 167, 326, 549, 846, 1336
AhdI GACNNNNNGTC 2 cut(s) 818, 958
AjnI CCWGG 3 cut(s) 103, 284, 956
AjuI GAANNNNNNNTTGG 6 cut(s) 91, 123, 482, 514, 1100, 1132
AluBI AGCT 9 cut(s) 17, 318, 353, 602, 720, 746, 1070, 1091, 1101
AluI AGCT 9 cut(s) 17, 318, 353, 602, 720, 746, 1070, 1091, 1101
Alw26I GTCTC 1 cut(s) 736
AoxI GGCC 5 cut(s) 513, 654, 700, 906, 1235
ApeKI GCWGC 1 cut(s) 401
ApoI RAATTY 1 cut(s) 1145
AseI ATTAAT 1 cut(s) 797
Asp718I GGTACC 1 cut(s) 619
AspLEI GCGC 1 cut(s) 794
AspS9I GGNCC 4 cut(s) 649, 705, 960, 970
AsuC2I CCSGG 4 cut(s) 653, 658, 947, 964
AsuHPI GGTGA 4 cut(s) 274, 337, 677, 913
AsuII TTCGAA 1 cut(s) 1142
AsuNHI GCTAGC 1 cut(s) 1373
AvaII GGWCC 4 cut(s) 649, 705, 960, 970
BaeGI GKGCMC 1 cut(s) 776
BanI GGYRCC 2 cut(s) 94, 619
BanII GRGCYC 2 cut(s) 574, 663
BbsI GAAGAC 2 cut(s) 765, 935
BbvI GCAGC 1 cut(s) 413
BccI CCATC 5 cut(s) 457, 690, 1049, 1115, 1221
BceAI ACGGC 6 cut(s) 320, 528, 553, 715, 830, 948
BcgI CGANNNNNNTGC 2 cut(s) 451, 485
BciT130I CCWGG 3 cut(s) 105, 286, 958
BciVI GTATCC 1 cut(s) 401
BcnI CCSGG 4 cut(s) 653, 658, 947, 964
BcoDI GTCTC 1 cut(s) 736
BfaI CTAG 2 cut(s) 8, 1374
BfmI CTRYAG 1 cut(s) 85
BfrI CTTAAG 1 cut(s) 721
BfuAI ACCTGC 1 cut(s) 991
BfuI GTATCC 1 cut(s) 401
BglI GCCNNNNNGGC 1 cut(s) 464
BisI GCNGC 3 cut(s) 402, 456, 459
BlsI GCNGC 3 cut(s) 403, 457, 460
Bme1390I CCNGG 7 cut(s) 105, 286, 653, 658, 947, 958, 964
Bme18I GGWCC 4 cut(s) 649, 705, 960, 970
BmeRI GACNNNNNGTC 2 cut(s) 818, 958
BmgT120I GGNCC 4 cut(s) 649, 705, 960, 970
BmiI GGNNCC 8 cut(s) 96, 158, 290, 621, 651, 962, 972, 1276
BmrFI CCNGG 7 cut(s) 105, 286, 653, 658, 947, 958, 964
BmrI ACTGGG 1 cut(s) 1373
BmsI GCATC 2 cut(s) 352, 1351
BmtI GCTAGC 1 cut(s) 1377
BmuI ACTGGG 1 cut(s) 1373
BoxI GACNNNNGTC 1 cut(s) 935
BpiI GAAGAC 2 cut(s) 765, 935
BplI GAGNNNNNCTC 2 cut(s) 1241, 1273
BpmI CTGGAG 1 cut(s) 940
Bpu14I TTCGAA 1 cut(s) 1142
BpuMI CCSGG 4 cut(s) 653, 658, 947, 964
BsaHI GRCGYC 1 cut(s) 333
BsaJI CCNNGG 2 cut(s) 428, 493
Bsc4I CCNNNNNNNGG 6 cut(s) 104, 272, 494, 694, 888, 963
Bse1I ACTGG 3 cut(s) 30, 121, 1379
Bse3DI GCAATG 1 cut(s) 467
BseBI CCWGG 3 cut(s) 105, 286, 958
BseDI CCNNGG 2 cut(s) 428, 493
BseGI GGATG 3 cut(s) 442, 1126, 1232
BseLI CCNNNNNNNGG 6 cut(s) 104, 272, 494, 694, 888, 963
BseMI GCAATG 1 cut(s) 467
BseMII CTCAG 2 cut(s) 36, 345
BseNI ACTGG 3 cut(s) 30, 121, 1379
BseSI GKGCMC 1 cut(s) 776
BseX3I CGGCCG 2 cut(s) 654, 700
BseXI GCAGC 1 cut(s) 413
Bsh1236I CGCG 3 cut(s) 461, 495, 792
Bsh1285I CGRYCG 3 cut(s) 642, 657, 703
BshFI GGCC 5 cut(s) 515, 656, 702, 908, 1237
BshNI GGYRCC 2 cut(s) 94, 619
BsiEI CGRYCG 3 cut(s) 642, 657, 703
BsiSI CCGG 6 cut(s) 273, 653, 657, 703, 947, 964
BslFI GGGAC 2 cut(s) 929, 946
BslI CCNNNNNNNGG 6 cut(s) 104, 272, 494, 694, 888, 963
BsmAI GTCTC 1 cut(s) 736
BsmFI GGGAC 2 cut(s) 929, 946
BsnI GGCC 5 cut(s) 515, 656, 702, 908, 1237
Bsp119I TTCGAA 1 cut(s) 1142
Bsp1286I GDGCHC 3 cut(s) 574, 663, 776
Bsp143I GATC 1 cut(s) 751
BspACI CCGC 4 cut(s) 456, 459, 493, 495
BspANI GGCC 5 cut(s) 515, 656, 702, 908, 1237
BspCNI CTCAG 2 cut(s) 37, 346
BspFNI CGCG 3 cut(s) 461, 495, 792
BspLI GGNNCC 8 cut(s) 96, 158, 290, 621, 651, 962, 972, 1276
BspMAI CTGCAG 1 cut(s) 89
BspMI ACCTGC 1 cut(s) 991
BspOI GCTAGC 1 cut(s) 1377
BspT104I TTCGAA 1 cut(s) 1142
BspT107I GGYRCC 2 cut(s) 94, 619
BspTI CTTAAG 1 cut(s) 721
BsrDI GCAATG 1 cut(s) 467
BsrI ACTGG 3 cut(s) 30, 121, 1379
BssECI CCNNGG 2 cut(s) 428, 493
BssMI GATC 1 cut(s) 751
BssNI GRCGYC 1 cut(s) 333
Bst2UI CCWGG 3 cut(s) 105, 286, 958
Bst4CI ACNGT 6 cut(s) 349, 389, 481, 640, 740, 1344
Bst6I CTCTTC 1 cut(s) 205
BstACI GRCGYC 1 cut(s) 333
BstAFI CTTAAG 1 cut(s) 721
BstBI TTCGAA 1 cut(s) 1142
BstC8I GCNNGC 2 cut(s) 453, 1375
BstDEI CTNAG 4 cut(s) 45, 314, 354, 809
BstDSI CCRYGG 1 cut(s) 493
BstF5I GGATG 3 cut(s) 442, 1126, 1232
BstFNI CGCG 3 cut(s) 461, 495, 792
BstHHI GCGC 1 cut(s) 794
BstKTI GATC 1 cut(s) 754
BstMAI GTCTC 1 cut(s) 736
BstMBI GATC 1 cut(s) 751
BstMCI CGRYCG 3 cut(s) 642, 657, 703
BstMWI GCNNNNNNNGC 4 cut(s) 464, 1076, 1361, 1370
BstNI CCWGG 3 cut(s) 105, 286, 958
BstNSI RCATGY 1 cut(s) 821
BstPAI GACNNNNGTC 1 cut(s) 935
BstSCI CCNGG 7 cut(s) 103, 284, 651, 656, 945, 956, 962
BstSFI CTRYAG 1 cut(s) 85
BstSLI GKGCMC 1 cut(s) 776
BstUI CGCG 3 cut(s) 461, 495, 792
BstV1I GCAGC 1 cut(s) 413
BstV2I GAAGAC 2 cut(s) 765, 935
BstZI CGGCCG 2 cut(s) 654, 700
BsuI GTATCC 1 cut(s) 401
BsuRI GGCC 5 cut(s) 515, 656, 702, 908, 1237
BtgI CCRYGG 1 cut(s) 493
BtgZI GCGATG 1 cut(s) 476
BtsCI GGATG 3 cut(s) 442, 1126, 1232
BtsIMutI CAGTG 3 cut(s) 72, 477, 1386
BveI ACCTGC 1 cut(s) 991
Cac8I GCNNGC 2 cut(s) 453, 1375
CfoI GCGC 1 cut(s) 794
Cfr13I GGNCC 4 cut(s) 649, 705, 960, 970
Cfr42I CCGCGG 1 cut(s) 496
CpoI CGGWCCG 1 cut(s) 705
CseI GACGC 1 cut(s) 341
CsiI ACCWGGT 1 cut(s) 103
Csp6I GTAC 2 cut(s) 215, 620
CspI CGGWCCG 1 cut(s) 705
CviAII CATG 5 cut(s) 517, 567, 587, 818, 888
CviQI GTAC 2 cut(s) 215, 620
DdeI CTNAG 4 cut(s) 45, 314, 354, 809
DpnI GATC 1 cut(s) 753
DpnII GATC 1 cut(s) 751
DrdI GACNNNNNNGTC 1 cut(s) 638
DriI GACNNNNNGTC 2 cut(s) 818, 958
DseDI GACNNNNNNGTC 1 cut(s) 638
EaeI YGGCCR 3 cut(s) 513, 654, 700
EagI CGGCCG 2 cut(s) 654, 700
Eam1104I CTCTTC 1 cut(s) 205
Eam1105I GACNNNNNGTC 2 cut(s) 818, 958
EarI CTCTTC 1 cut(s) 205
EclXI CGGCCG 2 cut(s) 654, 700
Eco24I GRGCYC 2 cut(s) 574, 663
Eco47I GGWCC 4 cut(s) 649, 705, 960, 970
Eco52I CGGCCG 2 cut(s) 654, 700
Eco57I CTGAAG 1 cut(s) 732
EcoO109I RGGNCCY 2 cut(s) 649, 960
EcoRII CCWGG 3 cut(s) 103, 284, 956
EcoT38I GRGCYC 2 cut(s) 574, 663
FaeI CATG 5 cut(s) 520, 570, 590, 821, 891
FaqI GGGAC 2 cut(s) 929, 946
FatI CATG 5 cut(s) 516, 566, 586, 817, 887
Fnu4HI GCNGC 3 cut(s) 402, 456, 459
FokI GGATG 3 cut(s) 449, 1133, 1239
FriOI GRGCYC 2 cut(s) 574, 663
Fsp4HI GCNGC 3 cut(s) 402, 456, 459
FspBI CTAG 2 cut(s) 8, 1374
GlaI GCGC 1 cut(s) 793
GluI GCNGC 3 cut(s) 402, 456, 459
GsuI CTGGAG 1 cut(s) 940
HaeIII GGCC 5 cut(s) 515, 656, 702, 908, 1237
HapII CCGG 6 cut(s) 273, 653, 657, 703, 947, 964
HgaI GACGC 1 cut(s) 341
HhaI GCGC 1 cut(s) 794
Hin1I GRCGYC 1 cut(s) 333
Hin1II CATG 5 cut(s) 520, 570, 590, 821, 891
Hin6I GCGC 1 cut(s) 792
HinP1I GCGC 1 cut(s) 792
HincII GTYRAC 1 cut(s) 861
HindII GTYRAC 1 cut(s) 861
HindIII AAGCTT 5 cut(s) 15, 718, 744, 1089, 1099
HinfI GANTC 7 cut(s) 209, 296, 356, 498, 766, 842, 953
HpaII CCGG 6 cut(s) 273, 653, 657, 703, 947, 964
HphI GGTGA 4 cut(s) 274, 337, 677, 913
Hpy166II GTNNAC 4 cut(s) 484, 786, 861, 952
Hpy188I TCNGA 6 cut(s) 46, 115, 361, 751, 841, 1291
Hpy188III TCNNGA 3 cut(s) 755, 1052, 1151
Hpy8I GTNNAC 4 cut(s) 484, 786, 861, 952
Hpy99I CGWCG 1 cut(s) 335
HpyAV CCTTC 4 cut(s) 618, 634, 898, 1227
HpyCH4III ACNGT 6 cut(s) 349, 389, 481, 640, 740, 1344
HpyCH4IV ACGT 2 cut(s) 321, 989
HpyF10VI GCNNNNNNNGC 4 cut(s) 464, 1076, 1361, 1370
HpyF3I CTNAG 4 cut(s) 45, 314, 354, 809
HpySE526I ACGT 2 cut(s) 321, 989
Hsp92I GRCGYC 1 cut(s) 333
Hsp92II CATG 5 cut(s) 520, 570, 590, 821, 891
HspAI GCGC 1 cut(s) 792
KpnI GGTACC 1 cut(s) 623
KspI CCGCGG 1 cut(s) 496
Kzo9I GATC 1 cut(s) 751
LmnI GCTCC 4 cut(s) 162, 294, 855, 1274
Lsp1109I GCAGC 1 cut(s) 413
LweI GCATC 2 cut(s) 352, 1351
MabI ACCWGGT 1 cut(s) 103
MaeI CTAG 2 cut(s) 8, 1374
MaeII ACGT 2 cut(s) 321, 989
MaeIII GTNAC 4 cut(s) 123, 439, 998, 1191
MalI GATC 1 cut(s) 753
MboI GATC 1 cut(s) 751
MhlI GDGCHC 3 cut(s) 574, 663, 776
MluCI AATT 2 cut(s) 1132, 1145
MlyI GAGTC 3 cut(s) 290, 365, 947
MmeI TCCRAC 3 cut(s) 277, 414, 948
MseI TTAA 4 cut(s) 12, 722, 797, 1094
MspA1I CMGCKG 1 cut(s) 495
MspCI CTTAAG 1 cut(s) 721
MspI CCGG 6 cut(s) 273, 653, 657, 703, 947, 964
MspR9I CCNGG 7 cut(s) 105, 286, 653, 658, 947, 958, 964
MvaI CCWGG 3 cut(s) 105, 286, 958
MvnI CGCG 3 cut(s) 461, 495, 792
MwoI GCNNNNNNNGC 4 cut(s) 464, 1076, 1361, 1370
NciI CCSGG 4 cut(s) 653, 658, 947, 964
NdeII GATC 1 cut(s) 751
NheI GCTAGC 1 cut(s) 1373
NlaIII CATG 5 cut(s) 520, 570, 590, 821, 891
NlaIV GGNNCC 8 cut(s) 96, 158, 290, 621, 651, 962, 972, 1276
NmuCI GTSAC 3 cut(s) 123, 439, 1191
NspI RCATGY 1 cut(s) 821
NspV TTCGAA 1 cut(s) 1142
PcsI WCGNNNNNNNCGW 2 cut(s) 327, 705
PfeI GAWTC 4 cut(s) 209, 498, 766, 842
PkrI GCNGC 3 cut(s) 403, 457, 460
PleI GAGTC 3 cut(s) 290, 364, 947
PpsI GAGTC 3 cut(s) 290, 364, 947
PpuMI RGGWCCY 2 cut(s) 649, 960
PshAI GACNNNNGTC 1 cut(s) 935
PshBI ATTAAT 1 cut(s) 797
Psp5II RGGWCCY 2 cut(s) 649, 960
Psp6I CCWGG 3 cut(s) 103, 284, 956
PspGI CCWGG 3 cut(s) 103, 284, 956
PspN4I GGNNCC 8 cut(s) 96, 158, 290, 621, 651, 962, 972, 1276
PspPI GGNCC 4 cut(s) 649, 705, 960, 970
PspPPI RGGWCCY 2 cut(s) 649, 960
PstI CTGCAG 1 cut(s) 89
RsaI GTAC 2 cut(s) 216, 621
RsaNI GTAC 2 cut(s) 215, 620
Rsr2I CGGWCCG 1 cut(s) 705
RsrII CGGWCCG 1 cut(s) 705
SacII CCGCGG 1 cut(s) 496
SaqAI TTAA 4 cut(s) 12, 722, 797, 1094
SatI GCNGC 3 cut(s) 402, 456, 459
Sau3AI GATC 1 cut(s) 751
Sau96I GGNCC 4 cut(s) 649, 705, 960, 970
SchI GAGTC 3 cut(s) 290, 365, 947
ScrFI CCNGG 7 cut(s) 105, 286, 653, 658, 947, 958, 964
SduI GDGCHC 3 cut(s) 574, 663, 776
SexAI ACCWGGT 1 cut(s) 103
SfaNI GCATC 2 cut(s) 352, 1351
SfcI CTRYAG 1 cut(s) 85
Sfr303I CCGCGG 1 cut(s) 496
SfuI TTCGAA 1 cut(s) 1142
SgrBI CCGCGG 1 cut(s) 496
SinI GGWCC 4 cut(s) 649, 705, 960, 970
SmlI CTYRAG 1 cut(s) 721
SmoI CTYRAG 1 cut(s) 721
Sse9I AATT 2 cut(s) 1132, 1145
SsiI CCGC 4 cut(s) 456, 459, 493, 495
SspMI CTAG 2 cut(s) 8, 1374
StyD4I CCNGG 7 cut(s) 103, 284, 651, 656, 945, 956, 962
TaaI ACNGT 6 cut(s) 349, 389, 481, 640, 740, 1344
TaiI ACGT 2 cut(s) 324, 992
TaqI TCGA 8 cut(s) 144, 372, 663, 780, 1142, 1152, 1181, 1359
TaqII GACCGA 1 cut(s) 722
TasI AATT 2 cut(s) 1132, 1145
TauI GCSGC 2 cut(s) 458, 461
TfiI GAWTC 4 cut(s) 209, 498, 766, 842
Tru1I TTAA 4 cut(s) 12, 722, 797, 1094
Tru9I TTAA 4 cut(s) 12, 722, 797, 1094
TscAI CASTG 3 cut(s) 72, 484, 1386
TseFI GTSAC 3 cut(s) 123, 439, 1191
TseI GCWGC 1 cut(s) 401
Tsp45I GTSAC 3 cut(s) 123, 439, 1191
TspDTI ATGAA 2 cut(s) 99, 603
TspGWI ACGGA 2 cut(s) 149, 202
TspRI CASTG 3 cut(s) 72, 484, 1386
Vha464I CTTAAG 1 cut(s) 721
VpaK11BI GGWCC 4 cut(s) 649, 705, 960, 970
VspI ATTAAT 1 cut(s) 797
XapI RAATTY 1 cut(s) 1145
XceI RCATGY 1 cut(s) 821
XcmI CCANNNNNNNNNTGG 1 cut(s) 964
XspI CTAG 2 cut(s) 8, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.