Prupe.3G253000_v2.0.a1

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000138
Physical Location & Seq
Forward (+)
24237635 .. 24239905
2271 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G253000.1

Sequence Viewer

Length: 1416 bp
ATGGCAGAGCTAAATTCAGTCAGAGTGCTTGAGGTTTGCAATGTTGCTCCACAGCCAAGCTCACCTGCTGGCTCAGCCACACCTCCGCCTGAGGCCCTTCCTCTAACCTTGTTTGATTTGCCCTGGCTCAGATTTGCACCCGTCCAACGCCTTTTCTTCTATGAAATCTCCAACTCCTTTGACACCGCCATACTCGTTTCAAAACTCAAAGCCTCCCTCTCTGTCGCCCTCCAACAATTCCTACCACTAGCAGGGAACCTCAAATGGCCCCAAGACTCCCCCAAGCCCATTCTCAGTTATGTCCAAGGCGACGCCGTTTCACTCACCATAGCCGAGTCTGATGCCGATTTCCATCATCTTTCAAGCCGTAGCAACTTTGTTGAGGCCAAAGAGTACCATTCTCTCGTACCCCAATTGACAACCTCTCACGAAAAGGCGGCAGCCGTGGCGTTCCAAGTCACCATCTTTTCCAACGGCAATGGCTTCTCCATTGGCACATCCATGCACCATGCCATCCTGGACGGCAAGTCTTCAACCATGTTTGTGAAATCATGGGCTCACATTTGTAAACATCTTGGTGATGATCCATCTGGTTCAGCTCTACCAGATCAGCTGAAACCATTTTTTGACAGAAGGGTCGTCCAAGACCCGGCCGGGCTCGAACCAATTTTCTTGAACCAGCTTCAGAATCTGGACGGACCCAACAACAAGAGCTTGATGGTTACCCAGTTTAAATCTCCACCACCAGACGCGGTTCGTGGCATCTTTGTAATCACACGACCCGAAATAGAAGCAATGAAGCAATGGGTTTCGACCAAAATGGCAGAGATGATCAAGAATGAAAAACAATCTGATCGTCCTCATTTGTCAACATTTTCTGTAACATGTGCTTATACATGGGTTTGCTTACTCAAGGCAGAGGAAAAACAGACCGATAAGCCAGTTATGATGGGCTTCACTCTGGACTGCAGGCCTCGCTTTGACCCTCCGATACCTGCAAACTATTTTGGGAACTGCATAGCCGGCCGTGCAATAGTTGCAGAGAGAAAAGGGCTTCTTGGAGAAGATGGGTTGACCGTGGCGGTCAACGAAATCAGTGAAGCCATAAAAAGCGCGGACAGTGATAGGATTTTGAAAGGGGCAGAGACTTTGGTTCCAGTACTTTATCCTGCTATGAGGAGTGAAGAGAGAGTTATGGGTGTTGCTGGTTCACCTAGGTTTGGGATTTATGATACAGATTTTGGATGGGGAAGGCCAAGCAAGGTGGAGGTGGTTTCGATCGAAGAGACAGGAGCCATGTCCCTGGCAGAGTCTAGGGATGGTATTGCTGGAGATTTTGAGGTTGGTTTGGTTTTGGAAAAACATCATATGCAAGCTTTTGCTTCTCTGTTTGCTAAAGGACTTCAAGACCTTTGA

Protein Analysis

472

Amino Acids

51.58

Weight (kDa)

5.63

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 73
AasI GACNNNNNNGTC 1 cut(s) 635
Acc36I ACCTGC 2 cut(s) 73, 1003
AccII CGCG 2 cut(s) 752, 1115
AciI CCGC 6 cut(s) 86, 186, 437, 752, 1082, 1115
AclWI GGATC 1 cut(s) 578
AcoI YGGCCR 2 cut(s) 651, 1024
AcsI RAATTY 1 cut(s) 13
AcuI CTGAAG 1 cut(s) 668
AcyI GRCGYC 1 cut(s) 312
AfaI GTAC 3 cut(s) 395, 408, 1161
AfiI CCNNNNNNNGG 3 cut(s) 251, 649, 1220
AflIII ACRYGT 1 cut(s) 884
AgsI TTSAA 6 cut(s) 201, 363, 534, 676, 1135, 1406
AhdI GACNNNNNGTC 1 cut(s) 526
AjnI CCWGG 3 cut(s) 122, 516, 1302
AluBI AGCT 7 cut(s) 10, 60, 599, 613, 682, 714, 1376
AluI AGCT 7 cut(s) 10, 60, 599, 613, 682, 714, 1376
Alw26I GTCTC 2 cut(s) 1139, 1280
AlwI GGATC 1 cut(s) 578
AlwNI CAGNNNCTG 1 cut(s) 691
AoxI GGCC 7 cut(s) 93, 266, 384, 651, 971, 1024, 1253
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 1 cut(s) 13
AspA2I CCTAGG 1 cut(s) 1214
AspLEI GCGC 1 cut(s) 1115
AspS9I GGNCC 3 cut(s) 94, 267, 698
AsuC2I CCSGG 2 cut(s) 650, 655
AsuHPI GGTGA 5 cut(s) 54, 316, 451, 590, 1203
AvaII GGWCC 1 cut(s) 698
AvrII CCTAGG 1 cut(s) 1214
AxyI CCTNAGG 1 cut(s) 90
BanII GRGCYC 2 cut(s) 559, 660
BbsI GAAGAC 1 cut(s) 522
BbvI GCAGC 1 cut(s) 452
BccI CCATC 9 cut(s) 360, 470, 521, 595, 712, 943, 1061, 1239, 1313
BceAI ACGGC 6 cut(s) 299, 351, 428, 490, 538, 1011
BcgI CGANNNNNNTGC 2 cut(s) 323, 357
BciT130I CCWGG 3 cut(s) 124, 518, 1304
BclI TGATCA 1 cut(s) 831
BcnI CCSGG 2 cut(s) 650, 655
BcoDI GTCTC 2 cut(s) 1139, 1280
BfaI CTAG 3 cut(s) 248, 1215, 1314
BfmI CTRYAG 1 cut(s) 967
BfuAI ACCTGC 2 cut(s) 73, 1003
BisI GCNGC 2 cut(s) 438, 441
BlnI CCTAGG 1 cut(s) 1214
BlpI GCTNAGC 1 cut(s) 73
BlsI GCNGC 2 cut(s) 439, 442
BmcAI AGTACT 1 cut(s) 1161
Bme1390I CCNGG 5 cut(s) 124, 518, 650, 655, 1304
Bme18I GGWCC 1 cut(s) 698
BmeRI GACNNNNNGTC 1 cut(s) 526
BmgT120I GGNCC 3 cut(s) 94, 267, 698
BmiI GGNNCC 5 cut(s) 257, 269, 700, 1155, 1294
BmrFI CCNGG 5 cut(s) 124, 518, 650, 655, 1304
BmrI ACTGGG 1 cut(s) 721
BmsI GCATC 2 cut(s) 331, 771
BmuI ACTGGG 1 cut(s) 721
BpiI GAAGAC 1 cut(s) 522
BpmI CTGGAG 1 cut(s) 1350
Bpu1102I GCTNAGC 1 cut(s) 73
BpuEI CTTGAG 2 cut(s) 50, 896
BpuMI CCSGG 2 cut(s) 650, 655
BsaBI GATNNNNATC 1 cut(s) 351
BsaHI GRCGYC 1 cut(s) 312
BsaJI CCNNGG 6 cut(s) 122, 304, 444, 1077, 1214, 1302
Bsc4I CCNNNNNNNGG 3 cut(s) 251, 649, 1220
Bse118I RCCGGY 1 cut(s) 1022
Bse1I ACTGG 3 cut(s) 727, 941, 1157
Bse21I CCTNAGG 1 cut(s) 90
Bse3DI GCAATG 4 cut(s) 46, 484, 801, 809
Bse8I GATNNNNATC 1 cut(s) 351
BseBI CCWGG 3 cut(s) 124, 518, 1304
BseDI CCNNGG 6 cut(s) 122, 304, 444, 1077, 1214, 1302
BseGI GGATG 4 cut(s) 497, 513, 1250, 1324
BseJI GATNNNNATC 1 cut(s) 351
BseLI CCNNNNNNNGG 3 cut(s) 251, 649, 1220
BseMI GCAATG 4 cut(s) 46, 484, 801, 809
BseMII CTCAG 4 cut(s) 81, 87, 142, 307
BseNI ACTGG 3 cut(s) 727, 941, 1157
BseRI GAGGAG 1 cut(s) 1192
BseX3I CGGCCG 2 cut(s) 651, 1024
BseXI GCAGC 1 cut(s) 452
Bsh1236I CGCG 2 cut(s) 752, 1115
Bsh1285I CGRYCG 3 cut(s) 654, 1027, 1281
BshFI GGCC 7 cut(s) 95, 268, 386, 653, 973, 1026, 1255
BsiEI CGRYCG 3 cut(s) 654, 1027, 1281
BsiSI CCGG 3 cut(s) 650, 654, 1023
BslFI GGGAC 1 cut(s) 1285
BslI CCNNNNNNNGG 3 cut(s) 251, 649, 1220
BsmAI GTCTC 2 cut(s) 1139, 1280
BsmFI GGGAC 1 cut(s) 1285
BsnI GGCC 7 cut(s) 95, 268, 386, 653, 973, 1026, 1255
Bsp1286I GDGCHC 2 cut(s) 559, 660
Bsp143I GATC 5 cut(s) 583, 607, 831, 853, 1278
Bsp1720I GCTNAGC 1 cut(s) 73
BspACI CCGC 6 cut(s) 86, 186, 437, 752, 1082, 1115
BspANI GGCC 7 cut(s) 95, 268, 386, 653, 973, 1026, 1255
BspCNI CTCAG 4 cut(s) 82, 86, 141, 306
BspFNI CGCG 2 cut(s) 752, 1115
BspLI GGNNCC 5 cut(s) 257, 269, 700, 1155, 1294
BspMAI CTGCAG 1 cut(s) 971
BspMI ACCTGC 2 cut(s) 73, 1003
BspPI GGATC 1 cut(s) 578
BsrDI GCAATG 4 cut(s) 46, 484, 801, 809
BsrFI RCCGGY 1 cut(s) 1022
BsrI ACTGG 3 cut(s) 727, 941, 1157
BssAI RCCGGY 1 cut(s) 1022
BssECI CCNNGG 6 cut(s) 122, 304, 444, 1077, 1214, 1302
BssMI GATC 5 cut(s) 583, 607, 831, 853, 1278
BssNI GRCGYC 1 cut(s) 312
BssT1I CCWWGG 2 cut(s) 304, 1214
Bst2UI CCWGG 3 cut(s) 124, 518, 1304
Bst4CI ACNGT 2 cut(s) 1078, 1121
Bst6I CTCTTC 2 cut(s) 1179, 1278
BstACI GRCGYC 1 cut(s) 312
BstAPI GCANNNNNTGC 1 cut(s) 1037
BstC8I GCNNGC 4 cut(s) 70, 971, 1024, 1374
BstDEI CTNAG 4 cut(s) 73, 90, 128, 293
BstDSI CCRYGG 2 cut(s) 444, 1077
BstEII GGTNACC 1 cut(s) 721
BstF5I GGATG 4 cut(s) 497, 513, 1250, 1324
BstFNI CGCG 2 cut(s) 752, 1115
BstHHI GCGC 1 cut(s) 1115
BstKTI GATC 5 cut(s) 586, 610, 834, 856, 1281
BstMAI GTCTC 2 cut(s) 1139, 1280
BstMBI GATC 5 cut(s) 583, 607, 831, 853, 1278
BstMCI CGRYCG 3 cut(s) 654, 1027, 1281
BstMWI GCNNNNNNNGC 6 cut(s) 74, 446, 975, 1023, 1028, 1037
BstNI CCWGG 3 cut(s) 124, 518, 1304
BstNSI RCATGY 1 cut(s) 888
BstPI GGTNACC 1 cut(s) 721
BstSCI CCNGG 5 cut(s) 122, 516, 648, 653, 1302
BstSFI CTRYAG 1 cut(s) 967
BstUI CGCG 2 cut(s) 752, 1115
BstV1I GCAGC 1 cut(s) 452
BstV2I GAAGAC 1 cut(s) 522
BstXI CCANNNNNNTGG 1 cut(s) 1303
BstZI CGGCCG 2 cut(s) 651, 1024
Bsu36I CCTNAGG 1 cut(s) 90
BsuRI GGCC 7 cut(s) 95, 268, 386, 653, 973, 1026, 1255
BtgI CCRYGG 2 cut(s) 444, 1077
BtsCI GGATG 4 cut(s) 497, 513, 1250, 1324
BtsIMutI CAGTG 2 cut(s) 1102, 1126
BveI ACCTGC 2 cut(s) 73, 1003
Cac8I GCNNGC 4 cut(s) 70, 971, 1024, 1374
CaiI CAGNNNCTG 1 cut(s) 691
CfoI GCGC 1 cut(s) 1115
Cfr10I RCCGGY 1 cut(s) 1022
Cfr13I GGNCC 3 cut(s) 94, 267, 698
CseI GACGC 2 cut(s) 320, 758
Csp6I GTAC 3 cut(s) 394, 407, 1160
CspCI CAANNNNNGTGG 2 cut(s) 1245, 1280
CviAII CATG 7 cut(s) 502, 509, 538, 552, 885, 897, 1297
CviQI GTAC 3 cut(s) 394, 407, 1160
DdeI CTNAG 4 cut(s) 73, 90, 128, 293
DpnI GATC 5 cut(s) 585, 609, 833, 855, 1280
DpnII GATC 5 cut(s) 583, 607, 831, 853, 1278
DraI TTTAAA 1 cut(s) 733
DrdI GACNNNNNNGTC 1 cut(s) 635
DriI GACNNNNNGTC 1 cut(s) 526
DseDI GACNNNNNNGTC 1 cut(s) 635
EaeI YGGCCR 2 cut(s) 651, 1024
EagI CGGCCG 2 cut(s) 651, 1024
Eam1104I CTCTTC 2 cut(s) 1179, 1278
Eam1105I GACNNNNNGTC 1 cut(s) 526
EarI CTCTTC 2 cut(s) 1179, 1278
EciI GGCGGA 1 cut(s) 75
EclXI CGGCCG 2 cut(s) 651, 1024
Eco130I CCWWGG 2 cut(s) 304, 1214
Eco147I AGGCCT 1 cut(s) 973
Eco24I GRGCYC 2 cut(s) 559, 660
Eco47I GGWCC 1 cut(s) 698
Eco52I CGGCCG 2 cut(s) 651, 1024
Eco57I CTGAAG 1 cut(s) 668
Eco81I CCTNAGG 1 cut(s) 90
Eco91I GGTNACC 1 cut(s) 721
EcoO109I RGGNCCY 1 cut(s) 94
EcoO65I GGTNACC 1 cut(s) 721
EcoRII CCWGG 3 cut(s) 122, 516, 1302
EcoT14I CCWWGG 2 cut(s) 304, 1214
EcoT38I GRGCYC 2 cut(s) 559, 660
ErhI CCWWGG 2 cut(s) 304, 1214
FaeI CATG 7 cut(s) 505, 512, 541, 555, 888, 900, 1300
FalI AAGNNNNNCTT 2 cut(s) 1041, 1073
FaqI GGGAC 1 cut(s) 1285
FatI CATG 7 cut(s) 501, 508, 537, 551, 884, 896, 1296
FauNDI CATATG 1 cut(s) 1368
FbaI TGATCA 1 cut(s) 831
Fnu4HI GCNGC 2 cut(s) 438, 441
FokI GGATG 4 cut(s) 484, 500, 1257, 1331
FriOI GRGCYC 2 cut(s) 559, 660
Fsp4HI GCNGC 2 cut(s) 438, 441
FspBI CTAG 3 cut(s) 248, 1215, 1314
GlaI GCGC 1 cut(s) 1114
GluI GCNGC 2 cut(s) 438, 441
GsuI CTGGAG 1 cut(s) 1350
HaeIII GGCC 7 cut(s) 95, 268, 386, 653, 973, 1026, 1255
HapII CCGG 3 cut(s) 650, 654, 1023
HgaI GACGC 2 cut(s) 320, 758
HhaI GCGC 1 cut(s) 1115
Hin1I GRCGYC 1 cut(s) 312
Hin1II CATG 7 cut(s) 505, 512, 541, 555, 888, 900, 1300
Hin6I GCGC 1 cut(s) 1113
HinP1I GCGC 1 cut(s) 1113
HincII GTYRAC 3 cut(s) 870, 1074, 1087
HindII GTYRAC 3 cut(s) 870, 1074, 1087
HindIII AAGCTT 1 cut(s) 1374
HinfI GANTC 4 cut(s) 275, 335, 688, 1310
HpaII CCGG 3 cut(s) 650, 654, 1023
HphI GGTGA 5 cut(s) 54, 316, 451, 590, 1203
Hpy166II GTNNAC 5 cut(s) 569, 870, 1074, 1087, 1211
Hpy188I TCNGA 6 cut(s) 23, 131, 340, 687, 853, 990
Hpy188III TCNNGA 6 cut(s) 428, 673, 692, 835, 962, 1406
Hpy8I GTNNAC 5 cut(s) 569, 870, 1074, 1087, 1211
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 3 cut(s) 107, 627, 1245
HpyCH4III ACNGT 2 cut(s) 1078, 1121
HpyCH4V TGCA 9 cut(s) 39, 137, 505, 969, 998, 1017, 1031, 1040, 1372
HpyF10VI GCNNNNNNNGC 6 cut(s) 74, 446, 975, 1023, 1028, 1037
HpyF3I CTNAG 4 cut(s) 73, 90, 128, 293
Hsp92I GRCGYC 1 cut(s) 312
Hsp92II CATG 7 cut(s) 505, 512, 541, 555, 888, 900, 1300
HspAI GCGC 1 cut(s) 1113
KroI GCCGGC 1 cut(s) 1022
KroNI GCCGGC 1 cut(s) 1024
Ksp22I TGATCA 1 cut(s) 831
Kzo9I GATC 5 cut(s) 583, 607, 831, 853, 1278
LmnI GCTCC 2 cut(s) 52, 1292
Lsp1109I GCAGC 1 cut(s) 452
LweI GCATC 2 cut(s) 331, 771
MaeI CTAG 3 cut(s) 248, 1215, 1314
MaeIII GTNAC 3 cut(s) 457, 721, 880
MalI GATC 5 cut(s) 585, 609, 833, 855, 1280
MboI GATC 5 cut(s) 583, 607, 831, 853, 1278
MboII GAAGA 5 cut(s) 148, 522, 1076, 1196, 1295
MfeI CAATTG 1 cut(s) 413
MhlI GDGCHC 2 cut(s) 559, 660
MluCI AATT 4 cut(s) 13, 236, 413, 666
MlyI GAGTC 3 cut(s) 269, 344, 1319
MmeI TCCRAC 4 cut(s) 169, 195, 256, 495
MroNI GCCGGC 1 cut(s) 1022
MseI TTAA 1 cut(s) 732
MslI CAYNNNNRTG 3 cut(s) 500, 542, 576
MspA1I CMGCKG 1 cut(s) 613
MspI CCGG 3 cut(s) 650, 654, 1023
MspR9I CCNGG 5 cut(s) 124, 518, 650, 655, 1304
MunI CAATTG 1 cut(s) 413
MvaI CCWGG 3 cut(s) 124, 518, 1304
MvnI CGCG 2 cut(s) 752, 1115
MwoI GCNNNNNNNGC 6 cut(s) 74, 446, 975, 1023, 1028, 1037
NaeI GCCGGC 1 cut(s) 1024
NciI CCSGG 2 cut(s) 650, 655
NdeI CATATG 1 cut(s) 1368
NdeII GATC 5 cut(s) 583, 607, 831, 853, 1278
NgoMIV GCCGGC 1 cut(s) 1022
NlaIII CATG 7 cut(s) 505, 512, 541, 555, 888, 900, 1300
NlaIV GGNNCC 5 cut(s) 257, 269, 700, 1155, 1294
NmeAIII GCCGAG 1 cut(s) 358
NmuCI GTSAC 1 cut(s) 457
NspI RCATGY 1 cut(s) 888
PaqCI CACCTGC 1 cut(s) 73
PceI AGGCCT 1 cut(s) 973
PciI ACATGT 1 cut(s) 884
PdiI GCCGGC 1 cut(s) 1024
PfeI GAWTC 1 cut(s) 688
PfoI TCCNGGA 1 cut(s) 516
PkrI GCNGC 2 cut(s) 439, 442
Ple19I CGATCG 1 cut(s) 1281
PleI GAGTC 3 cut(s) 269, 343, 1318
PpsI GAGTC 3 cut(s) 269, 343, 1318
PscI ACATGT 1 cut(s) 884
Psp6I CCWGG 3 cut(s) 122, 516, 1302
PspEI GGTNACC 1 cut(s) 721
PspGI CCWGG 3 cut(s) 122, 516, 1302
PspN4I GGNNCC 5 cut(s) 257, 269, 700, 1155, 1294
PspPI GGNCC 3 cut(s) 94, 267, 698
PstI CTGCAG 1 cut(s) 971
PstNI CAGNNNCTG 1 cut(s) 691
PvuI CGATCG 1 cut(s) 1281
PvuII CAGCTG 1 cut(s) 613
RsaI GTAC 3 cut(s) 395, 408, 1161
RsaNI GTAC 3 cut(s) 394, 407, 1160
RseI CAYNNNNRTG 3 cut(s) 500, 542, 576
SaqAI TTAA 1 cut(s) 732
SatI GCNGC 2 cut(s) 438, 441
Sau3AI GATC 5 cut(s) 583, 607, 831, 853, 1278
Sau96I GGNCC 3 cut(s) 94, 267, 698
ScaI AGTACT 1 cut(s) 1161
SchI GAGTC 3 cut(s) 269, 344, 1319
ScrFI CCNGG 5 cut(s) 124, 518, 650, 655, 1304
SduI GDGCHC 2 cut(s) 559, 660
SfaNI GCATC 2 cut(s) 331, 771
SfcI CTRYAG 1 cut(s) 967
SinI GGWCC 1 cut(s) 698
SmiMI CAYNNNNRTG 3 cut(s) 500, 542, 576
SmlI CTYRAG 2 cut(s) 29, 911
SmoI CTYRAG 2 cut(s) 29, 911
Sse9I AATT 4 cut(s) 13, 236, 413, 666
SseBI AGGCCT 1 cut(s) 973
SsiI CCGC 6 cut(s) 86, 186, 437, 752, 1082, 1115
SspMI CTAG 3 cut(s) 248, 1215, 1314
StuI AGGCCT 1 cut(s) 973
StyD4I CCNGG 5 cut(s) 122, 516, 648, 653, 1302
StyI CCWWGG 2 cut(s) 304, 1214
TaaI ACNGT 2 cut(s) 1078, 1121
TaqI TCGA 4 cut(s) 660, 812, 1277, 1281
TaqII GACCGA 1 cut(s) 947
TasI AATT 4 cut(s) 13, 236, 413, 666
TatI WGTACW 1 cut(s) 1159
TauI GCSGC 1 cut(s) 440
TfiI GAWTC 1 cut(s) 688
Tru1I TTAA 1 cut(s) 732
Tru9I TTAA 1 cut(s) 732
TscAI CASTG 2 cut(s) 1102, 1126
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 1 cut(s) 440
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 3 cut(s) 177, 812, 855
TspGWI ACGGA 1 cut(s) 711
TspRI CASTG 2 cut(s) 1102, 1126
VpaK11BI GGWCC 1 cut(s) 698
XapI RAATTY 1 cut(s) 13
XceI RCATGY 1 cut(s) 888
XmaJI CCTAGG 1 cut(s) 1214
XspI CTAG 3 cut(s) 248, 1215, 1314
ZrmI AGTACT 1 cut(s) 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.