Rh2CG564900

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
74612430 .. 74621246
8817 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG564900.1

Sequence Viewer

Length: 624 bp
ATGAACATCACTGACAGATATGGTATGATTGCAGAAAAGAATACATCTACCTTTGTTTTCTTTAAGAAATTATATAAAAGTTGCTGGAGGAGAGCTTGTGCCCATACATGGGTTTGCTTAGCCAAGGCAGAGGAAATCAAAGGTGGAAAAACGGTGTTGATCTTTAGTGTGGACTGTAGATCTCGCTTGGACCCTCCCATACCCGAAACCTATTTCAGGAATCGCATAGTAGGCCGTGTAGCAGTTGCAGAAACAGAAGGGCTATTGGGTGAAGATGGGTTATTTGTGGCCGTAAATGCAATCACTGAGGCTTTGAGAAGTTTGGATGATGGGATTTTCAATGGGGCAGAGAATTGGGTTTCGAAATTCCTCGACTTTTCCCTCTATAAGAGAATATATTCGATTGCCGGTTCACAATGGTTTGGGGTTTATAACACTGATTTCAGATGGGGTAAACCTAAGAAGGTTGAGCTTGTTTCCATAGACAAGACTGAAGCGGTCTCTCTTTCAGATAGCAAAAATGGTGGTGGAGCTGTTGAGGTTGGATTGGCTTTGAAGAAACAATATATGGAGACTTTTGTTTCTCTATTTCGTAGTCAATCCAAGGTGTTTGAACAACTCTGA

Protein Analysis

207

Amino Acids

23.36

Weight (kDa)

8.97

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 33 - 195 7.3e-20 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 432
AciI CCGC 1 cut(s) 497
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 1 cut(s) 365
AcuI CTGAAG 1 cut(s) 513
AfiI CCNNNNNNNGG 3 cut(s) 108, 109, 216
AgsI TTSAA 3 cut(s) 340, 556, 614
AluBI AGCT 3 cut(s) 95, 472, 533
AluI AGCT 3 cut(s) 95, 472, 533
Alw26I GTCTC 2 cut(s) 505, 566
AoxI GGCC 2 cut(s) 232, 288
ApoI RAATTY 1 cut(s) 365
Asp700I GAANNNNTTC 1 cut(s) 397
AspS9I GGNCC 1 cut(s) 190
AsuHPI GGTGA 1 cut(s) 281
AsuII TTCGAA 1 cut(s) 362
AvaII GGWCC 1 cut(s) 190
BaeGI GKGCMC 1 cut(s) 103
BccI CCATC 3 cut(s) 269, 323, 441
BceAI ACGGC 2 cut(s) 219, 275
BcoDI GTCTC 2 cut(s) 505, 566
BfmI CTRYAG 1 cut(s) 175
BglII AGATCT 1 cut(s) 179
BlpI GCTNAGC 1 cut(s) 118
Bme18I GGWCC 1 cut(s) 190
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 1 cut(s) 192
BpmI CTGGAG 1 cut(s) 106
Bpu1102I GCTNAGC 1 cut(s) 118
Bpu14I TTCGAA 1 cut(s) 362
BsaI GGTCTC 1 cut(s) 505
BsaJI CCNNGG 2 cut(s) 123, 603
BsaXI ACNNNNNCTCC 2 cut(s) 82, 112
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 109, 216
Bse118I RCCGGY 1 cut(s) 407
BseDI CCNNGG 2 cut(s) 123, 603
BseGI GGATG 1 cut(s) 331
BseLI CCNNNNNNNGG 3 cut(s) 108, 109, 216
BseMII CTCAG 1 cut(s) 297
BseRI GAGGAG 1 cut(s) 103
BseSI GKGCMC 1 cut(s) 103
BshFI GGCC 2 cut(s) 234, 290
BsiSI CCGG 1 cut(s) 408
BslI CCNNNNNNNGG 3 cut(s) 108, 109, 216
BsmAI GTCTC 2 cut(s) 505, 566
BsnI GGCC 2 cut(s) 234, 290
Bso31I GGTCTC 1 cut(s) 505
Bsp119I TTCGAA 1 cut(s) 362
Bsp1286I GDGCHC 1 cut(s) 103
Bsp143I GATC 2 cut(s) 159, 179
Bsp1720I GCTNAGC 1 cut(s) 118
BspACI CCGC 1 cut(s) 497
BspANI GGCC 2 cut(s) 234, 290
BspCNI CTCAG 1 cut(s) 298
BspLI GGNNCC 1 cut(s) 192
BspT104I TTCGAA 1 cut(s) 362
BspTNI GGTCTC 1 cut(s) 505
BsrFI RCCGGY 1 cut(s) 407
BssAI RCCGGY 1 cut(s) 407
BssECI CCNNGG 2 cut(s) 123, 603
BssMI GATC 2 cut(s) 159, 179
BssT1I CCWWGG 2 cut(s) 123, 603
Bst4CI ACNGT 2 cut(s) 154, 176
BstBI TTCGAA 1 cut(s) 362
BstDEI CTNAG 3 cut(s) 118, 306, 459
BstENI CCTNNNNNAGG 1 cut(s) 214
BstF5I GGATG 1 cut(s) 331
BstKTI GATC 2 cut(s) 162, 182
BstMAI GTCTC 2 cut(s) 505, 566
BstMBI GATC 2 cut(s) 159, 179
BstMWI GCNNNNNNNGC 2 cut(s) 231, 296
BstSFI CTRYAG 1 cut(s) 175
BstSLI GKGCMC 1 cut(s) 103
BstX2I RGATCY 1 cut(s) 179
BstYI RGATCY 1 cut(s) 179
BsuRI GGCC 2 cut(s) 234, 290
BtsCI GGATG 1 cut(s) 331
BtsIMutI CAGTG 3 cut(s) 9, 303, 435
Cfr10I RCCGGY 1 cut(s) 407
Cfr13I GGNCC 1 cut(s) 190
CspCI CAANNNNNGTGG 2 cut(s) 505, 540
CviAII CATG 1 cut(s) 108
CviJI RGCY 9 cut(s) 95, 122, 234, 262, 290, 311, 472, 533, 551
CviKI_1 RGCY 9 cut(s) 95, 122, 234, 262, 290, 311, 472, 533, 551
DdeI CTNAG 3 cut(s) 118, 306, 459
DpnI GATC 2 cut(s) 161, 181
DpnII GATC 2 cut(s) 159, 179
EaeI YGGCCR 1 cut(s) 288
Eco130I CCWWGG 2 cut(s) 123, 603
Eco31I GGTCTC 1 cut(s) 505
Eco47I GGWCC 1 cut(s) 190
Eco57I CTGAAG 1 cut(s) 513
EcoNI CCTNNNNNAGG 1 cut(s) 214
EcoT14I CCWWGG 2 cut(s) 123, 603
ErhI CCWWGG 2 cut(s) 123, 603
FaeI CATG 1 cut(s) 111
FatI CATG 1 cut(s) 107
FokI GGATG 1 cut(s) 338
GsuI CTGGAG 1 cut(s) 106
HaeIII GGCC 2 cut(s) 234, 290
HapII CCGG 1 cut(s) 408
Hin1II CATG 1 cut(s) 111
HinfI GANTC 1 cut(s) 220
HpaII CCGG 1 cut(s) 408
HphI GGTGA 1 cut(s) 281
Hpy166II GTNNAC 3 cut(s) 172, 413, 455
Hpy188I TCNGA 3 cut(s) 446, 511, 623
Hpy188III TCNNGA 1 cut(s) 217
Hpy8I GTNNAC 3 cut(s) 172, 413, 455
HpyAV CCTTC 2 cut(s) 251, 457
HpyCH4III ACNGT 2 cut(s) 154, 176
HpyCH4V TGCA 3 cut(s) 32, 248, 299
HpyF10VI GCNNNNNNNGC 2 cut(s) 231, 296
HpyF3I CTNAG 3 cut(s) 118, 306, 459
Hsp92II CATG 1 cut(s) 111
Kzo9I GATC 2 cut(s) 159, 179
LmnI GCTCC 1 cut(s) 530
LpnPI CCDG 3 cut(s) 70, 202, 421
MalI GATC 2 cut(s) 161, 181
MboI GATC 2 cut(s) 159, 179
MboII GAAGA 2 cut(s) 284, 568
MflI RGATCY 1 cut(s) 179
MhlI GDGCHC 1 cut(s) 103
MluCI AATT 3 cut(s) 68, 352, 365
MmeI TCCRAC 1 cut(s) 523
MnlI CCTC 7 cut(s) 81, 124, 204, 301, 380, 392, 532
MroXI GAANNNNTTC 1 cut(s) 397
MseI TTAA 1 cut(s) 63
MspI CCGG 1 cut(s) 408
MwoI GCNNNNNNNGC 2 cut(s) 231, 296
NdeII GATC 2 cut(s) 159, 179
NlaIII CATG 1 cut(s) 111
NlaIV GGNNCC 1 cut(s) 192
NspV TTCGAA 1 cut(s) 362
PdmI GAANNNNTTC 1 cut(s) 397
PfeI GAWTC 1 cut(s) 220
PsiI TTATAA 1 cut(s) 432
PspN4I GGNNCC 1 cut(s) 192
PspPI GGNCC 1 cut(s) 190
PsuI RGATCY 1 cut(s) 179
SaqAI TTAA 1 cut(s) 63
Sau3AI GATC 2 cut(s) 159, 179
Sau96I GGNCC 1 cut(s) 190
SduI GDGCHC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 175
SfuI TTCGAA 1 cut(s) 362
SinI GGWCC 1 cut(s) 190
Sse9I AATT 3 cut(s) 68, 352, 365
SsiI CCGC 1 cut(s) 497
StyI CCWWGG 2 cut(s) 123, 603
TaaI ACNGT 2 cut(s) 154, 176
TaqI TCGA 3 cut(s) 362, 372, 401
TasI AATT 3 cut(s) 68, 352, 365
TfiI GAWTC 1 cut(s) 220
Tru1I TTAA 1 cut(s) 63
Tru9I TTAA 1 cut(s) 63
TscAI CASTG 3 cut(s) 16, 310, 442
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 3 cut(s) 16, 310, 442
VpaK11BI GGWCC 1 cut(s) 190
XagI CCTNNNNNAGG 1 cut(s) 214
XapI RAATTY 1 cut(s) 365
XmnI GAANNNNTTC 1 cut(s) 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.