Rmu_sc0013848.1_g000001

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013848.1
Physical Location & Seq
Forward (+)
349 .. 751
403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013848.1_g000001.1.cds

Sequence Viewer

Length: 403 bp
atgccgcacccaaacacatctgtccagatagtggaggtttgcagggtgacaccgcaaccaaactcaccggactccaccgctgacacaccagatctgtcccttcctctaacctactttgacctattttggctgaggtttccacctgttcaacggctttacttctatgaattaacatcttctccctctaatttcgtacttgaaaatctcaaatcctccctctctctcgttctccagcacttcctacctctcgccggaaacctaacttggccccaagactcccacactcccatcctccgctacttccaaggcgacgccgtttcactcacagtagccgagtccgatgctgataacttcgaccacctttcaggctacggtgagtttattgaggccaaagattaccatc

Protein Analysis

134

Amino Acids

15.19

Weight (kDa)

4.55

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 31
AciI CCGC 4 cut(s) 5, 53, 78, 295
AcyI GRCGYC 1 cut(s) 312
AfaI GTAC 1 cut(s) 195
AfiI CCNNNNNNNGG 2 cut(s) 31, 251
AgsI TTSAA 2 cut(s) 149, 200
AjuI GAANNNNNNNTTGG 2 cut(s) 247, 279
AoxI GGCC 2 cut(s) 266, 387
AspS9I GGNCC 1 cut(s) 267
AsuHPI GGTGA 3 cut(s) 57, 58, 386
BbvCI CCTCAGC 1 cut(s) 131
BccI CCATC 1 cut(s) 296
BceAI ACGGC 2 cut(s) 167, 299
BcgI CGANNNNNNTGC 2 cut(s) 323, 357
BglII AGATCT 1 cut(s) 91
BisI GCNGC 1 cut(s) 5
BlsI GCNGC 1 cut(s) 6
BmgT120I GGNCC 1 cut(s) 267
BmiI GGNNCC 1 cut(s) 269
BmsI GCATC 1 cut(s) 331
BpmI CTGGAG 1 cut(s) 215
Bpu10I CCTNAGC 1 cut(s) 131
BsaBI GATNNNNATC 1 cut(s) 399
BsaHI GRCGYC 1 cut(s) 312
BsaJI CCNNGG 1 cut(s) 304
BsaWI WCCGGW 1 cut(s) 67
BsaXI ACNNNNNCTCC 2 cut(s) 163, 193
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 251
Bse8I GATNNNNATC 1 cut(s) 399
BseDI CCNNGG 1 cut(s) 304
BseGI GGATG 1 cut(s) 288
BseJI GATNNNNATC 1 cut(s) 399
BseLI CCNNNNNNNGG 2 cut(s) 31, 251
BseMII CTCAG 1 cut(s) 122
BshFI GGCC 2 cut(s) 268, 389
BsiSI CCGG 2 cut(s) 68, 252
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 2 cut(s) 31, 251
BsmFI GGGAC 1 cut(s) 82
BsnI GGCC 2 cut(s) 268, 389
Bsp143I GATC 1 cut(s) 91
BspACI CCGC 4 cut(s) 5, 53, 78, 295
BspANI GGCC 2 cut(s) 268, 389
BspCNI CTCAG 1 cut(s) 123
BspLI GGNNCC 1 cut(s) 269
BssECI CCNNGG 1 cut(s) 304
BssMI GATC 1 cut(s) 91
BssNI GRCGYC 1 cut(s) 312
BssT1I CCWWGG 1 cut(s) 304
Bst4CI ACNGT 2 cut(s) 328, 374
BstACI GRCGYC 1 cut(s) 312
BstDEI CTNAG 1 cut(s) 131
BstF5I GGATG 1 cut(s) 288
BstKTI GATC 1 cut(s) 94
BstMBI GATC 1 cut(s) 91
BstX2I RGATCY 1 cut(s) 91
BstYI RGATCY 1 cut(s) 91
BsuRI GGCC 2 cut(s) 268, 389
BtsCI GGATG 1 cut(s) 288
Cfr13I GGNCC 1 cut(s) 267
CseI GACGC 1 cut(s) 320
Csp6I GTAC 1 cut(s) 194
CviJI RGCY 6 cut(s) 130, 154, 268, 332, 369, 389
CviKI_1 RGCY 6 cut(s) 130, 154, 268, 332, 369, 389
CviQI GTAC 1 cut(s) 194
DdeI CTNAG 1 cut(s) 131
DpnI GATC 1 cut(s) 93
DpnII GATC 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 304
EcoT14I CCWWGG 1 cut(s) 304
ErhI CCWWGG 1 cut(s) 304
FaiI YATR 1 cut(s) 165
FaqI GGGAC 1 cut(s) 82
Fnu4HI GCNGC 1 cut(s) 5
FokI GGATG 1 cut(s) 275
Fsp4HI GCNGC 1 cut(s) 5
GluI GCNGC 1 cut(s) 5
GsuI CTGGAG 1 cut(s) 215
HaeIII GGCC 2 cut(s) 268, 389
HapII CCGG 2 cut(s) 68, 252
HgaI GACGC 1 cut(s) 320
Hin1I GRCGYC 1 cut(s) 312
HinfI GANTC 3 cut(s) 71, 275, 335
HpaII CCGG 2 cut(s) 68, 252
HphI GGTGA 3 cut(s) 57, 58, 386
Hpy188I TCNGA 1 cut(s) 340
Hpy188III TCNNGA 1 cut(s) 25
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 1 cut(s) 110
HpyCH4III ACNGT 2 cut(s) 328, 374
HpyCH4V TGCA 1 cut(s) 42
HpyF3I CTNAG 1 cut(s) 131
Hsp92I GRCGYC 1 cut(s) 312
Kzo9I GATC 1 cut(s) 91
LpnPI CCDG 8 cut(s) 28, 38, 81, 102, 156, 245, 265, 351
LweI GCATC 1 cut(s) 331
MaeIII GTNAC 1 cut(s) 46
MalI GATC 1 cut(s) 93
MboI GATC 1 cut(s) 91
MboII GAAGA 1 cut(s) 168
MflI RGATCY 1 cut(s) 91
MluCI AATT 2 cut(s) 167, 187
MlyI GAGTC 3 cut(s) 65, 269, 344
MnlI CCTC 9 cut(s) 28, 114, 126, 193, 223, 227, 255, 302, 379
MseI TTAA 1 cut(s) 170
MspA1I CMGCKG 1 cut(s) 80
MspI CCGG 2 cut(s) 68, 252
NdeII GATC 1 cut(s) 91
NlaIV GGNNCC 1 cut(s) 269
NmeAIII GCCGAG 1 cut(s) 358
NmuCI GTSAC 1 cut(s) 46
PflMI CCANNNNNTGG 1 cut(s) 31
PkrI GCNGC 1 cut(s) 6
PleI GAGTC 3 cut(s) 65, 269, 343
PpsI GAGTC 3 cut(s) 65, 269, 343
PspN4I GGNNCC 1 cut(s) 269
PspPI GGNCC 1 cut(s) 267
PsuI RGATCY 1 cut(s) 91
RsaI GTAC 1 cut(s) 195
RsaNI GTAC 1 cut(s) 194
SaqAI TTAA 1 cut(s) 170
SatI GCNGC 1 cut(s) 5
Sau3AI GATC 1 cut(s) 91
Sau96I GGNCC 1 cut(s) 267
SchI GAGTC 3 cut(s) 65, 269, 344
SetI ASST 8 cut(s) 39, 113, 123, 137, 145, 247, 261, 363
SfaNI GCATC 1 cut(s) 331
Sse9I AATT 2 cut(s) 167, 187
SsiI CCGC 4 cut(s) 5, 53, 78, 295
StyI CCWWGG 1 cut(s) 304
TaaI ACNGT 2 cut(s) 328, 374
TaqI TCGA 1 cut(s) 354
TasI AATT 2 cut(s) 167, 187
TauI GCSGC 1 cut(s) 7
Tru1I TTAA 1 cut(s) 170
Tru9I TTAA 1 cut(s) 170
TseFI GTSAC 1 cut(s) 46
Tsp45I GTSAC 1 cut(s) 46
TspDTI ATGAA 1 cut(s) 180
Van91I CCANNNNNTGG 1 cut(s) 31
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.