pycom111g05720

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Reverse (-)
3640687 .. 3641634
948 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g05720.1

Sequence Viewer

Length: 894 bp
ATGTCACACCCAAACTCTGTGAAAGTTGTTGAGGTCTGCAAGGTTGCTCCACAACCACGCTCACTAGCTGACTCAGCCACACCACCACCTGAGTCCCTTCCTCTAACCTTCTTTGACTTGTTCTGGCTAAGATTTTCACCCGTCCAACGCCATTTCTTCTATGAAATCAACCATAATTCTTCCAACACTTACTTCTCCGATTCAGTACTAATCCCAAAACTCAGAGCCTCATTCTCTATCGCCCTCCGACACTTTCTACCTCTAGCCGGAAACGTCATATGGCCCCAAAACTTCCCTAAACCTATTCTTATTTCAAGCAACAACTTCAACATCAAAGCCGAAGAATACCACCCTCTTACACCCCATCTTGCCGTGTCTCACGAACGAGCCACCGCCGTGGCATTCCAAGTCACCATATTTCCTAACCGTGGCTTTTGTATTGGAACATCTATGCACCATGCAATCCTAGACGGCTTGACTTCAACCATGTTTGTAAAATTATGGGCTCACATATGCAAACACGAAAATTCCAATTTGATACCTGACCAGCTCAAACCATTATACGACAGAAGCGTCGTCCAAGACACCGCCGGGCTCGAACCAATTTTCTTGAACCAATTGCTAAACATGGATTCAGACCGGCCCTTCAATAGATGCTTGATGTTCGTCGATCATTTTAAAGCTCCAGCAGAAGACACAATTCGAGGAGCGTTTGTATTCACTCGGGAAAAAATAGAAGCACTAATTAAGGCAATCGGTGAAAGAGAAGAGACAACAACATGGTCATCAATCCGTTCAAAAATTGTCTACGTTTTGTGTCACATGTGCGTATGTATGGATTTGCTTAATCAAGGCAAAAAAAAATACAAATCGATCATAAAGCTGCAGTTCTGA

Protein Analysis

298

Amino Acids

33.93

Weight (kDa)

8.79

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 112 - 194 4.1e-10 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 572
AccI GTMKAC 1 cut(s) 807
AciI CCGC 2 cut(s) 393, 588
AcsI RAATTY 1 cut(s) 526
AfaI GTAC 1 cut(s) 207
AfiI CCNNNNNNNGG 2 cut(s) 266, 428
AflIII ACRYGT 1 cut(s) 822
AgsI TTSAA 6 cut(s) 315, 328, 483, 613, 649, 798
AjuI GAANNNNNNNTTGG 2 cut(s) 176, 208
AleI CACNNNNGTG 1 cut(s) 395
AluBI AGCT 4 cut(s) 68, 550, 683, 883
AluI AGCT 4 cut(s) 68, 550, 683, 883
Alw26I GTCTC 2 cut(s) 381, 764
Ama87I CYCGRG 1 cut(s) 723
AoxI GGCC 2 cut(s) 281, 641
ApeKI GCWGC 1 cut(s) 883
ApoI RAATTY 1 cut(s) 526
AspS9I GGNCC 2 cut(s) 282, 642
AsuC2I CCSGG 1 cut(s) 592
AsuHPI GGTGA 3 cut(s) 129, 403, 770
AvaI CYCGRG 1 cut(s) 723
BanII GRGCYC 2 cut(s) 508, 597
BbsI GAAGAC 1 cut(s) 699
BbvI GCAGC 1 cut(s) 870
BccI CCATC 1 cut(s) 372
BceAI ACGGC 3 cut(s) 356, 380, 487
BcnI CCSGG 1 cut(s) 592
BcoDI GTCTC 2 cut(s) 381, 764
BfaI CTAG 3 cut(s) 65, 263, 467
BfmI CTRYAG 1 cut(s) 884
BisI GCNGC 1 cut(s) 884
BlsI GCNGC 1 cut(s) 885
BmcAI AGTACT 1 cut(s) 207
Bme1390I CCNGG 1 cut(s) 592
BmeT110I CYCGRG 1 cut(s) 723
BmgT120I GGNCC 2 cut(s) 282, 642
BmiI GGNNCC 1 cut(s) 284
BmrFI CCNGG 1 cut(s) 592
BmsI GCATC 1 cut(s) 644
BpiI GAAGAC 1 cut(s) 699
BpmI CTGGAG 1 cut(s) 669
BpuMI CCSGG 1 cut(s) 592
Bsa29I ATCGAT 1 cut(s) 872
BsaJI CCNNGG 2 cut(s) 396, 427
BsaXI ACNNNNNCTCC 2 cut(s) 699, 729
Bsc4I CCNNNNNNNGG 2 cut(s) 266, 428
Bse118I RCCGGY 1 cut(s) 639
BseCI ATCGAT 1 cut(s) 872
BseDI CCNNGG 2 cut(s) 396, 427
BseLI CCNNNNNNNGG 2 cut(s) 266, 428
BseMII CTCAG 3 cut(s) 81, 87, 235
BseRI GAGGAG 1 cut(s) 720
BseXI GCAGC 1 cut(s) 870
BshFI GGCC 2 cut(s) 283, 643
BshVI ATCGAT 1 cut(s) 872
BsiHKCI CYCGRG 1 cut(s) 723
BsiSI CCGG 3 cut(s) 267, 591, 640
BslFI GGGAC 1 cut(s) 79
BslI CCNNNNNNNGG 2 cut(s) 266, 428
BsmAI GTCTC 2 cut(s) 381, 764
BsmFI GGGAC 1 cut(s) 79
BsmI GAATGC 1 cut(s) 401
BsnI GGCC 2 cut(s) 283, 643
BsoBI CYCGRG 1 cut(s) 723
Bsp1286I GDGCHC 2 cut(s) 508, 597
Bsp143I GATC 2 cut(s) 670, 873
BspACI CCGC 2 cut(s) 393, 588
BspANI GGCC 2 cut(s) 283, 643
BspCNI CTCAG 3 cut(s) 82, 86, 234
BspDI ATCGAT 1 cut(s) 872
BspLI GGNNCC 1 cut(s) 284
BspMAI CTGCAG 1 cut(s) 888
BsrFI RCCGGY 1 cut(s) 639
BssAI RCCGGY 1 cut(s) 639
BssECI CCNNGG 2 cut(s) 396, 427
BssMI GATC 2 cut(s) 670, 873
Bst4CI ACNGT 1 cut(s) 428
Bst6I CTCTTC 1 cut(s) 762
BstDEI CTNAG 4 cut(s) 73, 90, 128, 221
BstDSI CCRYGG 2 cut(s) 396, 427
BstKTI GATC 2 cut(s) 673, 876
BstMAI GTCTC 2 cut(s) 381, 764
BstMBI GATC 2 cut(s) 670, 873
BstMWI GCNNNNNNNGC 1 cut(s) 74
BstNSI RCATGY 1 cut(s) 826
BstSCI CCNGG 1 cut(s) 590
BstSFI CTRYAG 1 cut(s) 884
BstV1I GCAGC 1 cut(s) 870
BstV2I GAAGAC 1 cut(s) 699
BstXI CCANNNNNNTGG 1 cut(s) 397
Bsu15I ATCGAT 1 cut(s) 872
BsuRI GGCC 2 cut(s) 283, 643
BsuTUI ATCGAT 1 cut(s) 872
BtgI CCRYGG 2 cut(s) 396, 427
Cfr10I RCCGGY 1 cut(s) 639
Cfr13I GGNCC 2 cut(s) 282, 642
ClaI ATCGAT 1 cut(s) 872
CseI GACGC 1 cut(s) 562
Csp6I GTAC 1 cut(s) 206
CviAII CATG 5 cut(s) 458, 487, 628, 780, 823
CviQI GTAC 1 cut(s) 206
DdeI CTNAG 4 cut(s) 73, 90, 128, 221
DpnI GATC 2 cut(s) 672, 875
DpnII GATC 2 cut(s) 670, 873
DraI TTTAAA 1 cut(s) 679
DrdI GACNNNNNNGTC 1 cut(s) 572
DseDI GACNNNNNNGTC 1 cut(s) 572
Eam1104I CTCTTC 1 cut(s) 762
EarI CTCTTC 1 cut(s) 762
Eco24I GRGCYC 2 cut(s) 508, 597
Eco88I CYCGRG 1 cut(s) 723
EcoT38I GRGCYC 2 cut(s) 508, 597
FaeI CATG 5 cut(s) 461, 490, 631, 783, 826
FaqI GGGAC 1 cut(s) 79
FatI CATG 5 cut(s) 457, 486, 627, 779, 822
FauNDI CATATG 2 cut(s) 278, 512
FblI GTMKAC 1 cut(s) 807
Fnu4HI GCNGC 1 cut(s) 884
FriOI GRGCYC 2 cut(s) 508, 597
Fsp4HI GCNGC 1 cut(s) 884
FspBI CTAG 3 cut(s) 65, 263, 467
GluI GCNGC 1 cut(s) 884
GsuI CTGGAG 1 cut(s) 669
HaeIII GGCC 2 cut(s) 283, 643
HapII CCGG 3 cut(s) 267, 591, 640
HgaI GACGC 1 cut(s) 562
Hin1II CATG 5 cut(s) 461, 490, 631, 783, 826
HinfI GANTC 4 cut(s) 71, 92, 200, 632
HpaII CCGG 3 cut(s) 267, 591, 640
HphI GGTGA 3 cut(s) 129, 403, 770
Hpy166II GTNNAC 1 cut(s) 808
Hpy188I TCNGA 5 cut(s) 199, 224, 248, 637, 893
Hpy188III TCNNGA 3 cut(s) 380, 610, 725
Hpy8I GTNNAC 1 cut(s) 808
Hpy99I CGWCG 2 cut(s) 578, 671
HpyAV CCTTC 3 cut(s) 107, 118, 655
HpyCH4III ACNGT 1 cut(s) 428
HpyCH4IV ACGT 2 cut(s) 273, 810
HpyCH4V TGCA 5 cut(s) 39, 454, 461, 516, 886
HpyF10VI GCNNNNNNNGC 1 cut(s) 74
HpyF3I CTNAG 4 cut(s) 73, 90, 128, 221
HpySE526I ACGT 2 cut(s) 273, 810
Hsp92II CATG 5 cut(s) 461, 490, 631, 783, 826
Kzo9I GATC 2 cut(s) 670, 873
LmnI GCTCC 3 cut(s) 52, 688, 707
LpnPI CCDG 8 cut(s) 102, 109, 280, 555, 560, 604, 653, 699
Lsp1109I GCAGC 1 cut(s) 870
LweI GCATC 1 cut(s) 644
MaeI CTAG 3 cut(s) 65, 263, 467
MaeII ACGT 2 cut(s) 273, 810
MaeIII GTNAC 3 cut(s) 3, 409, 818
MalI GATC 2 cut(s) 672, 875
MboI GATC 2 cut(s) 670, 873
MboII GAAGA 5 cut(s) 148, 171, 353, 704, 779
MfeI CAATTG 1 cut(s) 617
MhlI GDGCHC 2 cut(s) 508, 597
MluCI AATT 9 cut(s) 175, 497, 526, 532, 603, 617, 699, 744, 801
MlyI GAGTC 2 cut(s) 65, 101
MmeI TCCRAC 3 cut(s) 169, 207, 271
MnlI CCTC 7 cut(s) 25, 111, 238, 254, 270, 363, 698
MseI TTAA 3 cut(s) 678, 747, 846
MslI CAYNNNNRTG 1 cut(s) 395
MspI CCGG 3 cut(s) 267, 591, 640
MspR9I CCNGG 1 cut(s) 592
MunI CAATTG 1 cut(s) 617
Mva1269I GAATGC 1 cut(s) 401
MwoI GCNNNNNNNGC 1 cut(s) 74
NciI CCSGG 1 cut(s) 592
NdeI CATATG 2 cut(s) 278, 512
NdeII GATC 2 cut(s) 670, 873
NlaIII CATG 5 cut(s) 461, 490, 631, 783, 826
NlaIV GGNNCC 1 cut(s) 284
NmuCI GTSAC 3 cut(s) 3, 409, 818
NspI RCATGY 1 cut(s) 826
OliI CACNNNNGTG 1 cut(s) 395
PciI ACATGT 1 cut(s) 822
PcsI WCGNNNNNNNCGW 1 cut(s) 570
PctI GAATGC 1 cut(s) 401
PfeI GAWTC 2 cut(s) 200, 632
PkrI GCNGC 1 cut(s) 885
PleI GAGTC 2 cut(s) 65, 100
PpsI GAGTC 2 cut(s) 65, 100
PscI ACATGT 1 cut(s) 822
PspN4I GGNNCC 1 cut(s) 284
PspPI GGNCC 2 cut(s) 282, 642
PstI CTGCAG 1 cut(s) 888
RsaI GTAC 1 cut(s) 207
RsaNI GTAC 1 cut(s) 206
RseI CAYNNNNRTG 1 cut(s) 395
SaqAI TTAA 3 cut(s) 678, 747, 846
SatI GCNGC 1 cut(s) 884
Sau3AI GATC 2 cut(s) 670, 873
Sau96I GGNCC 2 cut(s) 282, 642
ScaI AGTACT 1 cut(s) 207
SchI GAGTC 2 cut(s) 65, 101
ScrFI CCNGG 1 cut(s) 592
SduI GDGCHC 2 cut(s) 508, 597
SfaNI GCATC 1 cut(s) 644
SfcI CTRYAG 1 cut(s) 884
SmiMI CAYNNNNRTG 1 cut(s) 395
Sse9I AATT 9 cut(s) 175, 497, 526, 532, 603, 617, 699, 744, 801
SsiI CCGC 2 cut(s) 393, 588
SspMI CTAG 3 cut(s) 65, 263, 467
StyD4I CCNGG 1 cut(s) 590
TaaI ACNGT 1 cut(s) 428
TaiI ACGT 2 cut(s) 276, 813
TaqI TCGA 4 cut(s) 597, 669, 703, 872
TasI AATT 9 cut(s) 175, 497, 526, 532, 603, 617, 699, 744, 801
TatI WGTACW 1 cut(s) 205
TfiI GAWTC 2 cut(s) 200, 632
Tru1I TTAA 3 cut(s) 678, 747, 846
Tru9I TTAA 3 cut(s) 678, 747, 846
TseFI GTSAC 3 cut(s) 3, 409, 818
TseI GCWGC 1 cut(s) 883
Tsp45I GTSAC 3 cut(s) 3, 409, 818
TspDTI ATGAA 1 cut(s) 177
TspGWI ACGGA 1 cut(s) 782
XapI RAATTY 1 cut(s) 526
XceI RCATGY 1 cut(s) 826
XmiI GTMKAC 1 cut(s) 807
XspI CTAG 3 cut(s) 65, 263, 467
ZrmI AGTACT 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.