Prupe.3G253100_v2.0.a1

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000138
Physical Location & Seq
Forward (+)
24240283 .. 24241948
1666 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G253100.1

Sequence Viewer

Length: 1032 bp
ATGGCAGACCCAACAAGCTCAGTTAAAGTAGTTGAAGTTTGCAAGGTGGCTCTTCCTCCTCCACCCTCACCTAGGTCATTCGCATCCCCAAGTTCCTTTCCTCTTACCTTCTTCGACATCCGTTGGTTAAGGTTTGCGCCGGTCCAGTGCCTCTATTTATGCGAAATGCCTACTTCCTCTGCAACACAACTCTTCTTTGATACTGTACTGGCCCCACAACTCAAAACCTTACTCTTTAACACCCTCCAACACTATCTACCTCTAGCAAGACACCTGACTTGGCCTCAAAACTCCCAAAAACCCGTTCTTAGCTATATCACTGTCTTTCCCAACTGTGGCCTTTCGATTGGGACCTCCATGCACCACACAATCCTATATGGCAAGACTTCAACGTTGTTTGCGAAATCTTGGGCTCACATTTGCAAACATGGTGATCAATCTAATTCATTGCTACTTGATCATTTGAAACAATTTTATGATACAAGAGTTATTCAGGATCCAGCTGAGCTGAGAGCTAAGAGCAATCTACTAGAACCTAGGAAAGCCCCACCAGGCTCCATCAGAGGCACCTTTCAAATCACAACAGCAGATATAGAAACACCGAGGCAATTGTTGAAGGCTAAATTGGCAGAGCAGAAACAACAAGATATTCGTTTAGTTCATGTGTCAACTTTCACTCTAGCATCCTTGTTTGGAGATAACGGGTTGGTTGTGGCTGTGAATGCAAATAGTGAAGCTATAAGAAGTTTGGAGAAGGGGGTTTTGGATGGGGCAGAGAATTGGGTTTCAAGAGTGTTTGCTGTGAGCAGTGAGAAAATGCTTATGCTTGCCGGTTCACATCGGTTTGGGATTTATGACACTGATTTTGGATGGGGAAGACCAAGGAGAACAGAAGTGGTTTCTATAGATAAAACGGGGGCGATCTCTTTGTCAGATAGCAAGAATGGTGGTGGAGGTGTTGAGATTGGGTTGGTTTTGAAGAAACAATATATGGATGCTTTTGCTGCTCTGTTTGCTCAAGGTCTTCTGTGA

Protein Analysis

344

Amino Acids

37.85

Weight (kDa)

9.13

Isoelectric Point (pI)

48.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 566
AclI AACGTT 1 cut(s) 392
AclWI GGATC 2 cut(s) 491, 504
AfaI GTAC 1 cut(s) 207
AfiI CCNNNNNNNGG 2 cut(s) 72, 335
AgsI TTSAA 7 cut(s) 35, 390, 466, 575, 616, 789, 979
AjnI CCWGG 1 cut(s) 550
AjuI GAANNNNNNNTTGG 6 cut(s) 288, 320, 608, 640, 746, 778
AluBI AGCT 6 cut(s) 18, 312, 503, 508, 515, 737
AluI AGCT 6 cut(s) 18, 312, 503, 508, 515, 737
AlwI GGATC 2 cut(s) 491, 504
AoxI GGCC 3 cut(s) 210, 281, 337
ApeKI GCWGC 1 cut(s) 1004
ArsI GACNNNNNNTTYG 2 cut(s) 848, 880
AspA2I CCTAGG 2 cut(s) 71, 536
AspLEI GCGC 1 cut(s) 139
AspS9I GGNCC 3 cut(s) 142, 211, 351
AsuHPI GGTGA 2 cut(s) 60, 443
AvaII GGWCC 2 cut(s) 142, 351
AvrII CCTAGG 2 cut(s) 71, 536
BaeI ACNNNNGTAYC 2 cut(s) 471, 504
BamHI GGATCC 1 cut(s) 496
BanI GGYRCC 1 cut(s) 566
BanII GRGCYC 1 cut(s) 415
BbsI GAAGAC 2 cut(s) 883, 1016
BbvI GCAGC 1 cut(s) 991
BccI CCATC 3 cut(s) 566, 761, 864
BciT130I CCWGG 1 cut(s) 552
BclI TGATCA 2 cut(s) 433, 457
BfaI CTAG 5 cut(s) 72, 263, 530, 537, 680
BfmI CTRYAG 1 cut(s) 903
BisI GCNGC 1 cut(s) 1005
BlnI CCTAGG 2 cut(s) 71, 536
BlpI GCTNAGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 1006
Bme1390I CCNGG 1 cut(s) 552
Bme18I GGWCC 2 cut(s) 142, 351
BmgT120I GGNCC 3 cut(s) 142, 211, 351
BmiI GGNNCC 5 cut(s) 213, 352, 498, 556, 568
BmrFI CCNGG 1 cut(s) 552
BmsI GCATC 3 cut(s) 92, 692, 985
BpiI GAAGAC 2 cut(s) 883, 1016
Bpu1102I GCTNAGC 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 1002
BsaJI CCNNGG 4 cut(s) 71, 536, 602, 881
Bsc4I CCNNNNNNNGG 2 cut(s) 72, 335
Bse118I RCCGGY 2 cut(s) 139, 830
Bse1I ACTGG 2 cut(s) 145, 213
Bse3DI GCAATG 1 cut(s) 446
BseBI CCWGG 1 cut(s) 552
BseDI CCNNGG 4 cut(s) 71, 536, 602, 881
BseGI GGATG 6 cut(s) 83, 117, 683, 772, 875, 1000
BseLI CCNNNNNNNGG 2 cut(s) 72, 335
BseMI GCAATG 1 cut(s) 446
BseMII CTCAG 3 cut(s) 33, 495, 500
BseNI ACTGG 2 cut(s) 145, 213
BseRI GAGGAG 1 cut(s) 48
BseXI GCAGC 1 cut(s) 991
BshFI GGCC 3 cut(s) 212, 283, 339
BshNI GGYRCC 1 cut(s) 566
BsiSI CCGG 2 cut(s) 140, 831
BslFI GGGAC 1 cut(s) 364
BslI CCNNNNNNNGG 2 cut(s) 72, 335
BsmFI GGGAC 1 cut(s) 364
BsmI GAATGC 1 cut(s) 727
BsnI GGCC 3 cut(s) 212, 283, 339
Bsp1286I GDGCHC 1 cut(s) 415
Bsp143I GATC 4 cut(s) 433, 457, 496, 921
Bsp1720I GCTNAGC 1 cut(s) 504
BspANI GGCC 3 cut(s) 212, 283, 339
BspCNI CTCAG 3 cut(s) 32, 496, 501
BspLI GGNNCC 5 cut(s) 213, 352, 498, 556, 568
BspPI GGATC 2 cut(s) 491, 504
BspQI GCTCTTC 1 cut(s) 57
BspT107I GGYRCC 1 cut(s) 566
BsrDI GCAATG 1 cut(s) 446
BsrFI RCCGGY 2 cut(s) 139, 830
BsrI ACTGG 2 cut(s) 145, 213
BssAI RCCGGY 2 cut(s) 139, 830
BssECI CCNNGG 4 cut(s) 71, 536, 602, 881
BssMI GATC 4 cut(s) 433, 457, 496, 921
BssT1I CCWWGG 3 cut(s) 71, 536, 881
Bst2UI CCWGG 1 cut(s) 552
Bst4CI ACNGT 3 cut(s) 205, 322, 335
Bst6I CTCTTC 2 cut(s) 57, 197
BstC8I GCNNGC 1 cut(s) 828
BstDEI CTNAG 5 cut(s) 19, 308, 504, 509, 516
BstENI CCTNNNNNAGG 1 cut(s) 70
BstF5I GGATG 6 cut(s) 83, 117, 683, 772, 875, 1000
BstHHI GCGC 1 cut(s) 139
BstKTI GATC 4 cut(s) 436, 460, 499, 924
BstMBI GATC 4 cut(s) 433, 457, 496, 921
BstMWI GCNNNNNNNGC 4 cut(s) 626, 722, 1004, 1013
BstNI CCWGG 1 cut(s) 552
BstSCI CCNGG 1 cut(s) 550
BstSFI CTRYAG 1 cut(s) 903
BstV1I GCAGC 1 cut(s) 991
BstV2I GAAGAC 2 cut(s) 883, 1016
BstX2I RGATCY 1 cut(s) 496
BstYI RGATCY 1 cut(s) 496
BsuRI GGCC 3 cut(s) 212, 283, 339
BtsCI GGATG 6 cut(s) 83, 117, 683, 772, 875, 1000
BtsI GCAGTG 1 cut(s) 814
BtsIMutI CAGTG 4 cut(s) 152, 318, 814, 858
Cac8I GCNNGC 1 cut(s) 828
CfoI GCGC 1 cut(s) 139
Cfr10I RCCGGY 2 cut(s) 139, 830
Cfr13I GGNCC 3 cut(s) 142, 211, 351
Csp6I GTAC 1 cut(s) 206
CspCI CAANNNNNGTGG 2 cut(s) 928, 963
CviAII CATG 3 cut(s) 358, 428, 662
CviQI GTAC 1 cut(s) 206
DdeI CTNAG 5 cut(s) 19, 308, 504, 509, 516
DpnI GATC 4 cut(s) 435, 459, 498, 923
DpnII GATC 4 cut(s) 433, 457, 496, 921
Eam1104I CTCTTC 2 cut(s) 57, 197
EarI CTCTTC 2 cut(s) 57, 197
Eco130I CCWWGG 3 cut(s) 71, 536, 881
Eco24I GRGCYC 1 cut(s) 415
Eco47I GGWCC 2 cut(s) 142, 351
EcoNI CCTNNNNNAGG 1 cut(s) 70
EcoO109I RGGNCCY 1 cut(s) 351
EcoRII CCWGG 1 cut(s) 550
EcoT14I CCWWGG 3 cut(s) 71, 536, 881
EcoT38I GRGCYC 1 cut(s) 415
ErhI CCWWGG 3 cut(s) 71, 536, 881
FaeI CATG 3 cut(s) 361, 431, 665
FaqI GGGAC 1 cut(s) 364
FatI CATG 3 cut(s) 357, 427, 661
FbaI TGATCA 2 cut(s) 433, 457
Fnu4HI GCNGC 1 cut(s) 1005
FokI GGATG 6 cut(s) 70, 104, 670, 779, 882, 1007
FriOI GRGCYC 1 cut(s) 415
Fsp4HI GCNGC 1 cut(s) 1005
FspBI CTAG 5 cut(s) 72, 263, 530, 537, 680
GlaI GCGC 1 cut(s) 138
GluI GCNGC 1 cut(s) 1005
HaeIII GGCC 3 cut(s) 212, 283, 339
HapII CCGG 2 cut(s) 140, 831
HhaI GCGC 1 cut(s) 139
Hin1II CATG 3 cut(s) 361, 431, 665
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HincII GTYRAC 1 cut(s) 669
HindII GTYRAC 1 cut(s) 669
HpaII CCGG 2 cut(s) 140, 831
HphI GGTGA 2 cut(s) 60, 443
Hpy166II GTNNAC 2 cut(s) 669, 836
Hpy188I TCNGA 2 cut(s) 563, 934
Hpy188III TCNNGA 2 cut(s) 494, 789
Hpy8I GTNNAC 2 cut(s) 669, 836
HpyAV CCTTC 3 cut(s) 118, 610, 748
HpyCH4III ACNGT 3 cut(s) 205, 322, 335
HpyCH4IV ACGT 1 cut(s) 392
HpyCH4V TGCA 5 cut(s) 42, 182, 361, 423, 725
HpyF10VI GCNNNNNNNGC 4 cut(s) 626, 722, 1004, 1013
HpyF3I CTNAG 5 cut(s) 19, 308, 504, 509, 516
HpySE526I ACGT 1 cut(s) 392
Hsp92II CATG 3 cut(s) 361, 431, 665
HspAI GCGC 1 cut(s) 137
Ksp22I TGATCA 2 cut(s) 433, 457
Kzo9I GATC 4 cut(s) 433, 457, 496, 921
LguI GCTCTTC 1 cut(s) 57
LmnI GCTCC 1 cut(s) 560
LpnPI CCDG 9 cut(s) 153, 158, 194, 287, 479, 513, 537, 564, 844
Lsp1109I GCAGC 1 cut(s) 991
LweI GCATC 3 cut(s) 92, 692, 985
MaeI CTAG 5 cut(s) 72, 263, 530, 537, 680
MaeII ACGT 1 cut(s) 392
MalI GATC 4 cut(s) 435, 459, 498, 923
MboI GATC 4 cut(s) 433, 457, 496, 921
MboII GAAGA 6 cut(s) 44, 103, 184, 888, 991, 1016
MfeI CAATTG 1 cut(s) 608
MflI RGATCY 1 cut(s) 496
MhlI GDGCHC 1 cut(s) 415
MluCI AATT 5 cut(s) 442, 470, 608, 623, 778
MmeI TCCRAC 1 cut(s) 271
MseI TTAA 3 cut(s) 24, 128, 237
MspA1I CMGCKG 1 cut(s) 503
MspI CCGG 2 cut(s) 140, 831
MspR9I CCNGG 1 cut(s) 552
MunI CAATTG 1 cut(s) 608
Mva1269I GAATGC 1 cut(s) 727
MvaI CCWGG 1 cut(s) 552
MwoI GCNNNNNNNGC 4 cut(s) 626, 722, 1004, 1013
NdeII GATC 4 cut(s) 433, 457, 496, 921
NlaIII CATG 3 cut(s) 361, 431, 665
NlaIV GGNNCC 5 cut(s) 213, 352, 498, 556, 568
PciSI GCTCTTC 1 cut(s) 57
PcsI WCGNNNNNNNCGW 1 cut(s) 398
PctI GAATGC 1 cut(s) 727
PkrI GCNGC 1 cut(s) 1006
PpuMI RGGWCCY 1 cut(s) 351
Psp1406I AACGTT 1 cut(s) 392
Psp5II RGGWCCY 1 cut(s) 351
Psp6I CCWGG 1 cut(s) 550
PspGI CCWGG 1 cut(s) 550
PspN4I GGNNCC 5 cut(s) 213, 352, 498, 556, 568
PspPI GGNCC 3 cut(s) 142, 211, 351
PspPPI RGGWCCY 1 cut(s) 351
PsuI RGATCY 1 cut(s) 496
PvuII CAGCTG 1 cut(s) 503
RsaI GTAC 1 cut(s) 207
RsaNI GTAC 1 cut(s) 206
SapI GCTCTTC 1 cut(s) 57
SaqAI TTAA 3 cut(s) 24, 128, 237
SatI GCNGC 1 cut(s) 1005
Sau3AI GATC 4 cut(s) 433, 457, 496, 921
Sau96I GGNCC 3 cut(s) 142, 211, 351
ScrFI CCNGG 1 cut(s) 552
SduI GDGCHC 1 cut(s) 415
SfaNI GCATC 3 cut(s) 92, 692, 985
SfcI CTRYAG 1 cut(s) 903
SinI GGWCC 2 cut(s) 142, 351
SmlI CTYRAG 1 cut(s) 1017
SmoI CTYRAG 1 cut(s) 1017
Sse9I AATT 5 cut(s) 442, 470, 608, 623, 778
SspMI CTAG 5 cut(s) 72, 263, 530, 537, 680
StyD4I CCNGG 1 cut(s) 550
StyI CCWWGG 3 cut(s) 71, 536, 881
TaaI ACNGT 3 cut(s) 205, 322, 335
TaiI ACGT 1 cut(s) 395
TaqI TCGA 2 cut(s) 114, 344
TasI AATT 5 cut(s) 442, 470, 608, 623, 778
TatI WGTACW 1 cut(s) 205
Tru1I TTAA 3 cut(s) 24, 128, 237
Tru9I TTAA 3 cut(s) 24, 128, 237
TscAI CASTG 4 cut(s) 152, 325, 814, 865
TseI GCWGC 1 cut(s) 1004
TspDTI ATGAA 2 cut(s) 435, 650
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 4 cut(s) 152, 325, 814, 865
VpaK11BI GGWCC 2 cut(s) 142, 351
XagI CCTNNNNNAGG 1 cut(s) 70
XmaJI CCTAGG 2 cut(s) 71, 536
XspI CTAG 5 cut(s) 72, 263, 530, 537, 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.