RLG00000021545

phenolic glucoside malonyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000138
Physical Location & Seq
Forward (+)
76316540 .. 76317991
1452 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021545

Sequence Viewer

Length: 852 bp
ATGGCATTGCAAATCACTCTCTTTCCCAATCGTGACTTTTCCATTGGAACAACAATGCACCATGCCATCCTTGATGGAAAAACTTCAACCTTGTTTGTCAAATATTGGGCTCACATATGCAAAAATGAATCATCTCCAACTTCTTTGCTCCCGGAGCAGCTCAAACCCAAAGCTCTTACACAAGACTTGATTCGAGGCACCTTCGAGCTCACGGAAACAAATGTACAAACCCTAAGAGAGCATGTGATGAATACCTTGGCGAAGAAGAAACGAAATGATGAGGAGGGTTCAGTACTACTTCATTCGTCAACATTTTCTCTAGCTTGTGCCCATACATGGGTTTGCTTAGCCAGGGCAGAGGAAATCAAAGGTGGAAAAACGGTGTTGATCTTTAGTGTGGACTGTAGATCTCGCTTGGACCCTCCCATACCCGAAACCTATTTCGGGAATTGCATAGTAGGCCGTGTAGCGGTTGCAGAAACAGAAGGGCTATTGGGTGAAGATGGGTTATTTGTGGCCGTAAATGCAATCACTGAGGCTTTGAGAAGTTTGGATGATGGGATTTTCAATGGGGCGGAGAATTGGGTTTCGAAATTCCTCGACTTTTCCCTCTATAAGAGAATATATTCCATTGCCGGTTCACAATGGTATGTGGTTTTTAACACTGATTTCGGATGGGGTAAACCGATGAAGGTCGAGCTTGTTTCCATAGATAAGACTGAAGCGGTCTCTCTTTCAGATAGCAAGAATGGTGGTGGAGCTGTTGAGGCTGGATTGGCTTTGAAGAAACAATATATGGAGTCTTTTCTTTCTCTATTTCCTAGTCAATCCAAGGTGTTTGAACAACTCTGA

Protein Analysis

284

Amino Acids

31.37

Weight (kDa)

5.91

Isoelectric Point (pI)

36.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 1 - 270 1.8e-30 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 197
AciI CCGC 3 cut(s) 470, 575, 725
AcoI YGGCCR 1 cut(s) 516
AcsI RAATTY 1 cut(s) 593
AcuI CTGAAG 1 cut(s) 741
AfaI GTAC 2 cut(s) 225, 294
AfiI CCNNNNNNNGG 4 cut(s) 336, 337, 444, 469
AgsI TTSAA 4 cut(s) 87, 568, 784, 842
AjnI CCWGG 1 cut(s) 350
AluBI AGCT 6 cut(s) 160, 173, 208, 323, 700, 761
AluI AGCT 6 cut(s) 160, 173, 208, 323, 700, 761
Alw21I GWGCWC 1 cut(s) 210
Alw26I GTCTC 1 cut(s) 733
AoxI GGCC 2 cut(s) 460, 516
ApeKI GCWGC 1 cut(s) 157
ApoI RAATTY 1 cut(s) 593
Asp700I GAANNNNTTC 2 cut(s) 82, 625
AspS9I GGNCC 1 cut(s) 418
AsuC2I CCSGG 1 cut(s) 152
AsuHPI GGTGA 1 cut(s) 509
AsuII TTCGAA 1 cut(s) 590
AvaII GGWCC 1 cut(s) 418
BaeGI GKGCMC 1 cut(s) 331
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 2 cut(s) 112, 210
Bbv12I GWGCWC 1 cut(s) 210
BbvI GCAGC 1 cut(s) 169
BccI CCATC 5 cut(s) 68, 74, 497, 551, 669
BceAI ACGGC 2 cut(s) 447, 503
BciT130I CCWGG 1 cut(s) 352
BcnI CCSGG 1 cut(s) 152
BcoDI GTCTC 1 cut(s) 733
BfaI CTAG 2 cut(s) 320, 822
BfmI CTRYAG 1 cut(s) 403
BglII AGATCT 1 cut(s) 407
BisI GCNGC 1 cut(s) 158
BlpI GCTNAGC 1 cut(s) 346
BlsI GCNGC 1 cut(s) 159
BmcAI AGTACT 1 cut(s) 294
Bme1390I CCNGG 2 cut(s) 152, 352
Bme18I GGWCC 1 cut(s) 418
BmgT120I GGNCC 1 cut(s) 418
BmiI GGNNCC 2 cut(s) 199, 420
BmrFI CCNGG 2 cut(s) 152, 352
Bpu1102I GCTNAGC 1 cut(s) 346
Bpu14I TTCGAA 1 cut(s) 590
BpuMI CCSGG 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 733
BsaJI CCNNGG 3 cut(s) 255, 351, 831
Bsc4I CCNNNNNNNGG 4 cut(s) 336, 337, 444, 469
Bse118I RCCGGY 1 cut(s) 635
Bse3DI GCAATG 2 cut(s) 5, 630
BseBI CCWGG 1 cut(s) 352
BseDI CCNNGG 3 cut(s) 255, 351, 831
BseGI GGATG 3 cut(s) 66, 559, 680
BseLI CCNNNNNNNGG 4 cut(s) 336, 337, 444, 469
BseMI GCAATG 2 cut(s) 5, 630
BseMII CTCAG 1 cut(s) 525
BseRI GAGGAG 1 cut(s) 296
BseSI GKGCMC 1 cut(s) 331
BseXI GCAGC 1 cut(s) 169
BshFI GGCC 2 cut(s) 462, 518
BshNI GGYRCC 1 cut(s) 197
BsiHKAI GWGCWC 1 cut(s) 210
BsiSI CCGG 2 cut(s) 152, 636
BslI CCNNNNNNNGG 4 cut(s) 336, 337, 444, 469
BsmAI GTCTC 1 cut(s) 733
BsnI GGCC 2 cut(s) 462, 518
Bso31I GGTCTC 1 cut(s) 733
Bsp119I TTCGAA 1 cut(s) 590
Bsp1286I GDGCHC 3 cut(s) 112, 210, 331
Bsp1407I TGTACA 1 cut(s) 223
Bsp143I GATC 2 cut(s) 387, 407
Bsp1720I GCTNAGC 1 cut(s) 346
BspACI CCGC 3 cut(s) 470, 575, 725
BspANI GGCC 2 cut(s) 462, 518
BspCNI CTCAG 1 cut(s) 526
BspLI GGNNCC 2 cut(s) 199, 420
BspT104I TTCGAA 1 cut(s) 590
BspT107I GGYRCC 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 733
BsrDI GCAATG 2 cut(s) 5, 630
BsrFI RCCGGY 1 cut(s) 635
BsrGI TGTACA 1 cut(s) 223
BssAI RCCGGY 1 cut(s) 635
BssECI CCNNGG 3 cut(s) 255, 351, 831
BssMI GATC 2 cut(s) 387, 407
BssT1I CCWWGG 2 cut(s) 255, 831
Bst2UI CCWGG 1 cut(s) 352
Bst4CI ACNGT 2 cut(s) 382, 404
BstAUI TGTACA 1 cut(s) 223
BstBI TTCGAA 1 cut(s) 590
BstDEI CTNAG 3 cut(s) 233, 346, 534
BstF5I GGATG 3 cut(s) 66, 559, 680
BstKTI GATC 2 cut(s) 390, 410
BstMAI GTCTC 1 cut(s) 733
BstMBI GATC 2 cut(s) 387, 407
BstMWI GCNNNNNNNGC 5 cut(s) 154, 459, 524, 767, 776
BstNI CCWGG 1 cut(s) 352
BstNSI RCATGY 1 cut(s) 245
BstSCI CCNGG 2 cut(s) 150, 350
BstSFI CTRYAG 1 cut(s) 403
BstSLI GKGCMC 1 cut(s) 331
BstV1I GCAGC 1 cut(s) 169
BstX2I RGATCY 1 cut(s) 407
BstYI RGATCY 1 cut(s) 407
BsuRI GGCC 2 cut(s) 462, 518
BtsCI GGATG 3 cut(s) 66, 559, 680
BtsIMutI CAGTG 2 cut(s) 531, 663
Cfr10I RCCGGY 1 cut(s) 635
Cfr13I GGNCC 1 cut(s) 418
Csp6I GTAC 2 cut(s) 224, 293
CspCI CAANNNNNGTGG 2 cut(s) 733, 768
CviAII CATG 3 cut(s) 62, 242, 336
CviQI GTAC 2 cut(s) 224, 293
DdeI CTNAG 3 cut(s) 233, 346, 534
DpnI GATC 2 cut(s) 389, 409
DpnII GATC 2 cut(s) 387, 407
EaeI YGGCCR 1 cut(s) 516
EciI GGCGGA 1 cut(s) 590
Ecl136II GAGCTC 1 cut(s) 208
Eco130I CCWWGG 2 cut(s) 255, 831
Eco24I GRGCYC 2 cut(s) 112, 210
Eco31I GGTCTC 1 cut(s) 733
Eco47I GGWCC 1 cut(s) 418
Eco53kI GAGCTC 1 cut(s) 208
Eco57I CTGAAG 1 cut(s) 741
EcoICRI GAGCTC 1 cut(s) 208
EcoRII CCWGG 1 cut(s) 350
EcoT14I CCWWGG 2 cut(s) 255, 831
EcoT38I GRGCYC 2 cut(s) 112, 210
ErhI CCWWGG 2 cut(s) 255, 831
FaeI CATG 3 cut(s) 65, 245, 339
FatI CATG 3 cut(s) 61, 241, 335
FauNDI CATATG 1 cut(s) 116
Fnu4HI GCNGC 1 cut(s) 158
FokI GGATG 3 cut(s) 53, 566, 687
FriOI GRGCYC 2 cut(s) 112, 210
Fsp4HI GCNGC 1 cut(s) 158
FspBI CTAG 2 cut(s) 320, 822
GluI GCNGC 1 cut(s) 158
HaeIII GGCC 2 cut(s) 462, 518
HapII CCGG 2 cut(s) 152, 636
Hin1II CATG 3 cut(s) 65, 245, 339
HincII GTYRAC 1 cut(s) 309
HindII GTYRAC 1 cut(s) 309
HinfI GANTC 3 cut(s) 128, 190, 800
HpaII CCGG 2 cut(s) 152, 636
HphI GGTGA 1 cut(s) 509
Hpy166II GTNNAC 4 cut(s) 309, 400, 641, 683
Hpy188I TCNGA 3 cut(s) 674, 739, 851
Hpy188III TCNNGA 2 cut(s) 32, 445
Hpy8I GTNNAC 4 cut(s) 309, 400, 641, 683
HpyAV CCTTC 3 cut(s) 211, 479, 685
HpyCH4III ACNGT 2 cut(s) 382, 404
HpyCH4V TGCA 6 cut(s) 10, 58, 120, 453, 476, 527
HpyF10VI GCNNNNNNNGC 5 cut(s) 154, 459, 524, 767, 776
HpyF3I CTNAG 3 cut(s) 233, 346, 534
Hsp92II CATG 3 cut(s) 65, 245, 339
Kzo9I GATC 2 cut(s) 387, 407
LmnI GCTCC 3 cut(s) 153, 154, 758
LpnPI CCDG 5 cut(s) 165, 337, 364, 649, 756
Lsp1109I GCAGC 1 cut(s) 169
MaeI CTAG 2 cut(s) 320, 822
MaeIII GTNAC 1 cut(s) 32
MalI GATC 2 cut(s) 389, 409
MboI GATC 2 cut(s) 387, 407
MboII GAAGA 4 cut(s) 274, 277, 512, 796
MflI RGATCY 1 cut(s) 407
MhlI GDGCHC 3 cut(s) 112, 210, 331
MluCI AATT 3 cut(s) 448, 580, 593
MlyI GAGTC 1 cut(s) 809
MmeI TCCRAC 1 cut(s) 161
MnlI CCTC 9 cut(s) 188, 274, 277, 352, 432, 529, 608, 620, 760
MroXI GAANNNNTTC 2 cut(s) 82, 625
MseI TTAA 1 cut(s) 660
MspI CCGG 2 cut(s) 152, 636
MspR9I CCNGG 2 cut(s) 152, 352
MvaI CCWGG 1 cut(s) 352
MwoI GCNNNNNNNGC 5 cut(s) 154, 459, 524, 767, 776
NciI CCSGG 1 cut(s) 152
NdeI CATATG 1 cut(s) 116
NdeII GATC 2 cut(s) 387, 407
NlaIII CATG 3 cut(s) 65, 245, 339
NlaIV GGNNCC 2 cut(s) 199, 420
NmuCI GTSAC 1 cut(s) 32
NspI RCATGY 1 cut(s) 245
NspV TTCGAA 1 cut(s) 590
PdmI GAANNNNTTC 2 cut(s) 82, 625
PfeI GAWTC 2 cut(s) 128, 190
PfoI TCCNGGA 1 cut(s) 150
PkrI GCNGC 1 cut(s) 159
PleI GAGTC 1 cut(s) 808
PpsI GAGTC 1 cut(s) 808
Psp124BI GAGCTC 1 cut(s) 210
Psp6I CCWGG 1 cut(s) 350
PspGI CCWGG 1 cut(s) 350
PspN4I GGNNCC 2 cut(s) 199, 420
PspPI GGNCC 1 cut(s) 418
PsuI RGATCY 1 cut(s) 407
RsaI GTAC 2 cut(s) 225, 294
RsaNI GTAC 2 cut(s) 224, 293
SacI GAGCTC 1 cut(s) 210
SaqAI TTAA 1 cut(s) 660
SatI GCNGC 1 cut(s) 158
Sau3AI GATC 2 cut(s) 387, 407
Sau96I GGNCC 1 cut(s) 418
ScaI AGTACT 1 cut(s) 294
SchI GAGTC 1 cut(s) 809
ScrFI CCNGG 2 cut(s) 152, 352
SduI GDGCHC 3 cut(s) 112, 210, 331
SfcI CTRYAG 1 cut(s) 403
SfuI TTCGAA 1 cut(s) 590
SinI GGWCC 1 cut(s) 418
Sse9I AATT 3 cut(s) 448, 580, 593
SsiI CCGC 3 cut(s) 470, 575, 725
SspI AATATT 1 cut(s) 104
SspMI CTAG 2 cut(s) 320, 822
SstI GAGCTC 1 cut(s) 210
StyD4I CCNGG 2 cut(s) 150, 350
StyI CCWWGG 2 cut(s) 255, 831
TaaI ACNGT 2 cut(s) 382, 404
TaqI TCGA 5 cut(s) 193, 204, 590, 600, 696
TasI AATT 3 cut(s) 448, 580, 593
TatI WGTACW 2 cut(s) 223, 292
TfiI GAWTC 2 cut(s) 128, 190
Tru1I TTAA 1 cut(s) 660
Tru9I TTAA 1 cut(s) 660
TscAI CASTG 2 cut(s) 538, 670
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 1 cut(s) 157
Tsp45I GTSAC 1 cut(s) 32
TspDTI ATGAA 4 cut(s) 141, 263, 290, 704
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 2 cut(s) 538, 670
VpaK11BI GGWCC 1 cut(s) 418
XapI RAATTY 1 cut(s) 593
XceI RCATGY 1 cut(s) 245
XmnI GAANNNNTTC 2 cut(s) 82, 625
XspI CTAG 2 cut(s) 320, 822
ZrmI AGTACT 1 cut(s) 294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.