RLG00000033155

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
23843747 .. 23844325
579 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033155

Sequence Viewer

Length: 579 bp
ATGAATTCTGATTCACTTCATTTGTCAGCGTTTGCTCTAACATGCGCCTATACTTGGGTTTGCTTAGTCAAGGCAGAAGAAATCAAATGTGAGAAAGTATTTATATTCCTCAGCGCCGACTACAGGTCTCGCTTAGATCCTCCTATATCTGCTAATTACTTTGGAAATTGCACCGGGGGCTGTGCAGCAGTCGCAAAAACAAAGGGGCTACTAGGAGAAGATGGGTTCGTTGTGGCTTTAAAGGCAATTAGTGAAGCTAATATGGGTTTGAAAAATGAGGGGGTACTTCTCGATGGGGCTGAGAGTTGGGTTTCAAAGTTTTGTACTTTGCAAGGTAGTGATAGGATTTTTTCGACTGCTGGCTCGCCTCGGTTTGGGATCTATGAGACAGATTTTGGATGGGGAAGACCAAAGAGGACTGAGGTGCTTACCATAGATAAGACAGGAGCCATCTCTTTTTCAGATAGCAAGAATGGTGGTGGAGGCGTTGAGGTTGGGCTGGTTTTGGAAGAGCATCTTATGGGAGTTTTTGCTTCTCTATTTGCCAAGGGTCTTCTTCATACACCTTTGATTAATTAA

Protein Analysis

193

Amino Acids

20.54

Weight (kDa)

5.63

Isoelectric Point (pI)

24.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 9 - 179 4e-19 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 131, 386
AcsI RAATTY 1 cut(s) 4
AfaI GTAC 2 cut(s) 285, 325
AfiI CCNNNNNNNGG 3 cut(s) 54, 123, 374
AgsI TTSAA 2 cut(s) 271, 315
AhdI GACNNNNNGTC 1 cut(s) 124
AluBI AGCT 1 cut(s) 257
AluI AGCT 1 cut(s) 257
Alw26I GTCTC 2 cut(s) 132, 380
AlwI GGATC 2 cut(s) 131, 386
ApeKI GCWGC 1 cut(s) 185
ApoI RAATTY 1 cut(s) 4
AseI ATTAAT 1 cut(s) 573
AspLEI GCGC 2 cut(s) 47, 116
AsuC2I CCSGG 1 cut(s) 175
BbsI GAAGAC 2 cut(s) 412, 545
BbvCI CCTCAGC 1 cut(s) 110
BbvI GCAGC 1 cut(s) 197
BccI CCATC 4 cut(s) 215, 287, 393, 458
BcnI CCSGG 1 cut(s) 175
BcoDI GTCTC 2 cut(s) 132, 380
BfaI CTAG 1 cut(s) 212
BfmI CTRYAG 1 cut(s) 121
BfoI RGCGCY 1 cut(s) 117
BisI GCNGC 1 cut(s) 186
BlsI GCNGC 1 cut(s) 187
Bme1390I CCNGG 1 cut(s) 175
BmeRI GACNNNNNGTC 1 cut(s) 124
BmiI GGNNCC 1 cut(s) 448
BmrFI CCNGG 1 cut(s) 175
BmsI GCATC 1 cut(s) 523
BpiI GAAGAC 2 cut(s) 412, 545
Bpu10I CCTNAGC 1 cut(s) 110
BpuMI CCSGG 1 cut(s) 175
BsaI GGTCTC 1 cut(s) 132
BsaJI CCNNGG 3 cut(s) 174, 368, 546
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 123, 374
BseDI CCNNGG 3 cut(s) 174, 368, 546
BseGI GGATG 1 cut(s) 404
BseLI CCNNNNNNNGG 3 cut(s) 54, 123, 374
BseMII CTCAG 3 cut(s) 124, 291, 411
BseXI GCAGC 1 cut(s) 197
BsgI GTGCAG 1 cut(s) 204
BsiSI CCGG 1 cut(s) 174
BslI CCNNNNNNNGG 3 cut(s) 54, 123, 374
BsmAI GTCTC 2 cut(s) 132, 380
Bso31I GGTCTC 1 cut(s) 132
Bsp143I GATC 2 cut(s) 136, 378
BspCNI CTCAG 3 cut(s) 123, 292, 412
BspLI GGNNCC 1 cut(s) 448
BspPI GGATC 2 cut(s) 131, 386
BspQI GCTCTTC 1 cut(s) 504
BspTNI GGTCTC 1 cut(s) 132
BssECI CCNNGG 3 cut(s) 174, 368, 546
BssMI GATC 2 cut(s) 136, 378
BssT1I CCWWGG 1 cut(s) 546
Bst6I CTCTTC 1 cut(s) 504
BstC8I GCNNGC 2 cut(s) 361, 365
BstDEI CTNAG 5 cut(s) 64, 110, 133, 300, 420
BstF5I GGATG 1 cut(s) 404
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 2 cut(s) 47, 116
BstKTI GATC 2 cut(s) 139, 381
BstMAI GTCTC 2 cut(s) 132, 380
BstMBI GATC 2 cut(s) 136, 378
BstMWI GCNNNNNNNGC 3 cut(s) 177, 191, 242
BstNSI RCATGY 1 cut(s) 45
BstSCI CCNGG 1 cut(s) 173
BstSFI CTRYAG 1 cut(s) 121
BstV1I GCAGC 1 cut(s) 197
BstV2I GAAGAC 2 cut(s) 412, 545
BstX2I RGATCY 2 cut(s) 136, 378
BstYI RGATCY 2 cut(s) 136, 378
BtsCI GGATG 1 cut(s) 404
Cac8I GCNNGC 2 cut(s) 361, 365
CfoI GCGC 2 cut(s) 47, 116
Csp6I GTAC 2 cut(s) 284, 324
CspCI CAANNNNNGTGG 2 cut(s) 457, 492
CviAII CATG 1 cut(s) 42
CviJI RGCY 8 cut(s) 180, 208, 236, 257, 299, 363, 449, 499
CviKI_1 RGCY 8 cut(s) 180, 208, 236, 257, 299, 363, 449, 499
CviQI GTAC 2 cut(s) 284, 324
DdeI CTNAG 5 cut(s) 64, 110, 133, 300, 420
DpnI GATC 2 cut(s) 138, 380
DpnII GATC 2 cut(s) 136, 378
DraI TTTAAA 1 cut(s) 240
DriI GACNNNNNGTC 1 cut(s) 124
Eam1104I CTCTTC 1 cut(s) 504
Eam1105I GACNNNNNGTC 1 cut(s) 124
EarI CTCTTC 1 cut(s) 504
Eco130I CCWWGG 1 cut(s) 546
Eco31I GGTCTC 1 cut(s) 132
EcoRI GAATTC 1 cut(s) 4
EcoT14I CCWWGG 1 cut(s) 546
ErhI CCWWGG 1 cut(s) 546
FaeI CATG 1 cut(s) 45
FaiI YATR 9 cut(s) 43, 51, 104, 146, 263, 384, 434, 521, 561
FalI AAGNNNNNCTT 2 cut(s) 501, 533
FatI CATG 1 cut(s) 41
Fnu4HI GCNGC 1 cut(s) 186
FokI GGATG 1 cut(s) 411
Fsp4HI GCNGC 1 cut(s) 186
FspBI CTAG 1 cut(s) 212
GlaI GCGC 2 cut(s) 46, 115
GluI GCNGC 1 cut(s) 186
HaeII RGCGCY 1 cut(s) 117
HapII CCGG 1 cut(s) 174
HhaI GCGC 2 cut(s) 47, 116
Hin1II CATG 1 cut(s) 45
Hin6I GCGC 2 cut(s) 45, 114
HinP1I GCGC 2 cut(s) 45, 114
HinfI GANTC 1 cut(s) 11
HpaII CCGG 1 cut(s) 174
Hpy188I TCNGA 2 cut(s) 10, 463
Hpy188III TCNNGA 1 cut(s) 290
HpyCH4V TGCA 3 cut(s) 171, 185, 331
HpyF10VI GCNNNNNNNGC 3 cut(s) 177, 191, 242
HpyF3I CTNAG 5 cut(s) 64, 110, 133, 300, 420
Hsp92II CATG 1 cut(s) 45
HspAI GCGC 2 cut(s) 45, 114
Kzo9I GATC 2 cut(s) 136, 378
LguI GCTCTTC 1 cut(s) 504
LmnI GCTCC 1 cut(s) 446
LpnPI CCDG 5 cut(s) 109, 187, 345, 429, 485
Lsp1109I GCAGC 1 cut(s) 197
LweI GCATC 1 cut(s) 523
MaeI CTAG 1 cut(s) 212
MalI GATC 2 cut(s) 138, 380
MboI GATC 2 cut(s) 136, 378
MboII GAAGA 6 cut(s) 89, 230, 417, 521, 545, 548
MflI RGATCY 2 cut(s) 136, 378
MluCI AATT 5 cut(s) 4, 154, 166, 246, 574
MnlI CCTC 8 cut(s) 119, 150, 271, 378, 408, 415, 476, 484
MseI TTAA 3 cut(s) 239, 573, 577
MspI CCGG 1 cut(s) 174
MspR9I CCNGG 1 cut(s) 175
MwoI GCNNNNNNNGC 3 cut(s) 177, 191, 242
NciI CCSGG 1 cut(s) 175
NdeII GATC 2 cut(s) 136, 378
NlaIII CATG 1 cut(s) 45
NlaIV GGNNCC 1 cut(s) 448
NspI RCATGY 1 cut(s) 45
PacI TTAATTAA 1 cut(s) 577
PciSI GCTCTTC 1 cut(s) 504
PfeI GAWTC 1 cut(s) 11
PkrI GCNGC 1 cut(s) 187
PshBI ATTAAT 1 cut(s) 573
PspN4I GGNNCC 1 cut(s) 448
PsuI RGATCY 2 cut(s) 136, 378
RsaI GTAC 2 cut(s) 285, 325
RsaNI GTAC 2 cut(s) 284, 324
SapI GCTCTTC 1 cut(s) 504
SaqAI TTAA 3 cut(s) 239, 573, 577
SatI GCNGC 1 cut(s) 186
Sau3AI GATC 2 cut(s) 136, 378
ScrFI CCNGG 1 cut(s) 175
SetI ASST 6 cut(s) 128, 259, 337, 426, 495, 568
SfaNI GCATC 1 cut(s) 523
SfcI CTRYAG 1 cut(s) 121
Sse9I AATT 5 cut(s) 4, 154, 166, 246, 574
SspMI CTAG 1 cut(s) 212
StyD4I CCNGG 1 cut(s) 173
StyI CCWWGG 1 cut(s) 546
TaqI TCGA 2 cut(s) 291, 353
TasI AATT 5 cut(s) 4, 154, 166, 246, 574
TatI WGTACW 1 cut(s) 323
TfiI GAWTC 1 cut(s) 11
Tru1I TTAA 3 cut(s) 239, 573, 577
Tru9I TTAA 3 cut(s) 239, 573, 577
TseI GCWGC 1 cut(s) 185
TspDTI ATGAA 3 cut(s) 8, 17, 548
VspI ATTAAT 1 cut(s) 573
XapI RAATTY 1 cut(s) 4
XceI RCATGY 1 cut(s) 45
XspI CTAG 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.