pycom111g05680

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Forward (+)
3625458 .. 3626135
678 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g05680.1

Sequence Viewer

Length: 678 bp
ATGCCGCGAGGCTCGATCCGAGGCACCTTCAAATTCACACGAAAAGATATCGAATCGCTGAGGCAATTGATGAGGACTAAAGTTGGAGATAAAAAACAAGAAGATGCTCACGTGTCAACTTTCACTCTAGCATGTGCCTATACATGGGTTTGCATTGTCAAGGCGGAGGAAATAAAAGGTGAGACAACGCGTATGGTCTTTAGCGCCGACTGCAGGCCTCGCCTAGACCCTCCTGTACCCACAAATTACTTCGGGAACTGCACAGCGGGATGTGTACCAGTTGTAGAAACAAAAAGGCTTTCTGGAGAAGACGGGCTGGTTGTGGCTGCAAATGCAATCCGCGAAGCTATAAGAAAGTTGGAGAAGGGGGTTTTGGATGGAGTGGAAAATTGGGTTTCGAAGGTGGTTACTGTGACTTCTGCGAGAATGCTTACCGTTGCCGGTTCAAATCGGTTTAGGGTTTATGATACCGACTTTGGATGGGGAAGACCAAAGAAGGTTGAGATTGTTACAATTGATAGAACAACAGCTATCTCCTTTTCAGACCCCAAGAGTGATGTTGGATTGGTTTTGGAAAAACATCATATGGAGGTTTTTGCTTCTCTGTTTTATAAAGATCTCAAAACAAATATTTGTGAGGAACTTAAAGCTCAAATGATTAAGAGTATTTATCTCTAA

Protein Analysis

226

Amino Acids

25.25

Weight (kDa)

9.1

Isoelectric Point (pI)

23.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 9 - 204 1.6e-21 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 612
AccB1I GGYRCC 1 cut(s) 23
AccII CGCG 3 cut(s) 7, 190, 342
AciI CCGC 4 cut(s) 5, 164, 266, 340
AclWI GGATC 1 cut(s) 10
AcsI RAATTY 1 cut(s) 32
AcvI CACGTG 1 cut(s) 112
AfaI GTAC 2 cut(s) 237, 276
AfiI CCNNNNNNNGG 2 cut(s) 144, 213
AflIII ACRYGT 2 cut(s) 111, 188
AgsI TTSAA 2 cut(s) 31, 447
AjuI GAANNNNNNNTTGG 2 cut(s) 356, 388
AluBI AGCT 3 cut(s) 347, 530, 650
AluI AGCT 3 cut(s) 347, 530, 650
Alw26I GTCTC 1 cut(s) 176
AlwI GGATC 1 cut(s) 10
AoxI GGCC 1 cut(s) 215
ApeKI GCWGC 1 cut(s) 326
ApoI RAATTY 1 cut(s) 32
AspLEI GCGC 1 cut(s) 206
AsuHPI GGTGA 1 cut(s) 191
AsuII TTCGAA 1 cut(s) 398
BanI GGYRCC 1 cut(s) 23
BbrPI CACGTG 1 cut(s) 112
BbsI GAAGAC 2 cut(s) 315, 493
BbvCI CCTCAGC 1 cut(s) 59
BbvI GCAGC 1 cut(s) 313
BccI CCATC 2 cut(s) 371, 474
BcoDI GTCTC 1 cut(s) 176
BfaI CTAG 2 cut(s) 128, 224
BfmI CTRYAG 1 cut(s) 211
BfoI RGCGCY 1 cut(s) 207
BglII AGATCT 1 cut(s) 616
BisI GCNGC 2 cut(s) 5, 327
BlsI GCNGC 2 cut(s) 6, 328
BmiI GGNNCC 1 cut(s) 25
BmsI GCATC 1 cut(s) 94
BpiI GAAGAC 2 cut(s) 315, 493
BpmI CTGGAG 1 cut(s) 324
Bpu10I CCTNAGC 1 cut(s) 59
Bpu14I TTCGAA 1 cut(s) 398
BsaAI YACGTR 1 cut(s) 112
BsaJI CCNNGG 1 cut(s) 19
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 213
Bse118I RCCGGY 1 cut(s) 440
Bse1I ACTGG 1 cut(s) 278
BseDI CCNNGG 1 cut(s) 19
BseGI GGATG 3 cut(s) 275, 382, 485
BseLI CCNNNNNNNGG 2 cut(s) 144, 213
BseMII CTCAG 1 cut(s) 50
BseNI ACTGG 1 cut(s) 278
BseXI GCAGC 1 cut(s) 313
BsgI GTGCAG 1 cut(s) 244
Bsh1236I CGCG 3 cut(s) 7, 190, 342
BshFI GGCC 1 cut(s) 217
BshNI GGYRCC 1 cut(s) 23
BsiSI CCGG 1 cut(s) 441
BslI CCNNNNNNNGG 2 cut(s) 144, 213
BsmAI GTCTC 1 cut(s) 176
BsmI GAATGC 1 cut(s) 432
BsnI GGCC 1 cut(s) 217
Bsp119I TTCGAA 1 cut(s) 398
Bsp143I GATC 2 cut(s) 15, 616
BspACI CCGC 4 cut(s) 5, 164, 266, 340
BspANI GGCC 1 cut(s) 217
BspCNI CTCAG 1 cut(s) 51
BspFNI CGCG 3 cut(s) 7, 190, 342
BspLI GGNNCC 1 cut(s) 25
BspMAI CTGCAG 1 cut(s) 215
BspPI GGATC 1 cut(s) 10
BspT104I TTCGAA 1 cut(s) 398
BspT107I GGYRCC 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 440
BsrI ACTGG 1 cut(s) 278
BssAI RCCGGY 1 cut(s) 440
BssECI CCNNGG 1 cut(s) 19
BssMI GATC 2 cut(s) 15, 616
Bst4CI ACNGT 2 cut(s) 412, 436
BstBAI YACGTR 1 cut(s) 112
BstBI TTCGAA 1 cut(s) 398
BstC8I GCNNGC 1 cut(s) 215
BstDEI CTNAG 1 cut(s) 59
BstF5I GGATG 3 cut(s) 275, 382, 485
BstFNI CGCG 3 cut(s) 7, 190, 342
BstH2I RGCGCY 1 cut(s) 207
BstHHI GCGC 1 cut(s) 206
BstKTI GATC 2 cut(s) 18, 619
BstMAI GTCTC 1 cut(s) 176
BstMBI GATC 2 cut(s) 15, 616
BstMWI GCNNNNNNNGC 3 cut(s) 210, 219, 332
BstNSI RCATGY 1 cut(s) 135
BstSFI CTRYAG 1 cut(s) 211
BstUI CGCG 3 cut(s) 7, 190, 342
BstV1I GCAGC 1 cut(s) 313
BstV2I GAAGAC 2 cut(s) 315, 493
BstX2I RGATCY 1 cut(s) 616
BstYI RGATCY 1 cut(s) 616
BsuRI GGCC 1 cut(s) 217
BtsCI GGATG 3 cut(s) 275, 382, 485
Cac8I GCNNGC 1 cut(s) 215
CfoI GCGC 1 cut(s) 206
Cfr10I RCCGGY 1 cut(s) 440
Csp6I GTAC 2 cut(s) 236, 275
CviAII CATG 2 cut(s) 132, 144
CviJI RGCY 8 cut(s) 12, 217, 298, 316, 326, 347, 530, 650
CviKI_1 RGCY 8 cut(s) 12, 217, 298, 316, 326, 347, 530, 650
CviQI GTAC 2 cut(s) 236, 275
DdeI CTNAG 1 cut(s) 59
DpnI GATC 2 cut(s) 17, 618
DpnII GATC 2 cut(s) 15, 616
EciI GGCGGA 1 cut(s) 179
Eco147I AGGCCT 1 cut(s) 217
Eco32I GATATC 1 cut(s) 49
Eco72I CACGTG 1 cut(s) 112
EcoRV GATATC 1 cut(s) 49
FaeI CATG 2 cut(s) 135, 147
FaiI YATR 9 cut(s) 133, 141, 145, 194, 350, 465, 585, 587, 612
FatI CATG 2 cut(s) 131, 143
FauI CCCGC 1 cut(s) 259
FauNDI CATATG 1 cut(s) 585
Fnu4HI GCNGC 2 cut(s) 5, 327
FokI GGATG 3 cut(s) 282, 389, 492
Fsp4HI GCNGC 2 cut(s) 5, 327
FspBI CTAG 2 cut(s) 128, 224
GlaI GCGC 1 cut(s) 205
GluI GCNGC 2 cut(s) 5, 327
GsuI CTGGAG 1 cut(s) 324
HaeII RGCGCY 1 cut(s) 207
HaeIII GGCC 1 cut(s) 217
HapII CCGG 1 cut(s) 441
HhaI GCGC 1 cut(s) 206
Hin1II CATG 2 cut(s) 135, 147
Hin6I GCGC 1 cut(s) 204
HinP1I GCGC 1 cut(s) 204
HincII GTYRAC 1 cut(s) 117
HindII GTYRAC 1 cut(s) 117
HinfI GANTC 1 cut(s) 53
HpaII CCGG 1 cut(s) 441
HphI GGTGA 1 cut(s) 191
Hpy166II GTNNAC 2 cut(s) 117, 275
Hpy188I TCNGA 2 cut(s) 20, 544
Hpy188III TCNNGA 2 cut(s) 253, 303
Hpy8I GTNNAC 2 cut(s) 117, 275
HpyAV CCTTC 4 cut(s) 37, 358, 394, 490
HpyCH4III ACNGT 2 cut(s) 412, 436
HpyCH4IV ACGT 1 cut(s) 111
HpyCH4V TGCA 5 cut(s) 153, 213, 261, 329, 335
HpyF10VI GCNNNNNNNGC 3 cut(s) 210, 219, 332
HpyF3I CTNAG 1 cut(s) 59
HpySE526I ACGT 1 cut(s) 111
Hsp92II CATG 2 cut(s) 135, 147
HspAI GCGC 1 cut(s) 204
Kzo9I GATC 2 cut(s) 15, 616
LpnPI CCDG 6 cut(s) 199, 246, 288, 291, 302, 454
Lsp1109I GCAGC 1 cut(s) 313
LweI GCATC 1 cut(s) 94
MaeI CTAG 2 cut(s) 128, 224
MaeII ACGT 1 cut(s) 111
MaeIII GTNAC 3 cut(s) 406, 412, 508
MalI GATC 2 cut(s) 17, 618
MboI GATC 2 cut(s) 15, 616
MboII GAAGA 3 cut(s) 113, 320, 498
MfeI CAATTG 2 cut(s) 65, 513
MflI RGATCY 1 cut(s) 616
MluCI AATT 5 cut(s) 32, 65, 244, 388, 513
MluI ACGCGT 1 cut(s) 188
MmeI TCCRAC 3 cut(s) 64, 339, 541
MnlI CCTC 8 cut(s) 14, 54, 66, 160, 228, 240, 583, 631
MseI TTAA 2 cut(s) 645, 660
MspA1I CMGCKG 1 cut(s) 266
MspI CCGG 1 cut(s) 441
MunI CAATTG 2 cut(s) 65, 513
Mva1269I GAATGC 1 cut(s) 432
MvnI CGCG 3 cut(s) 7, 190, 342
MwoI GCNNNNNNNGC 3 cut(s) 210, 219, 332
NdeI CATATG 1 cut(s) 585
NdeII GATC 2 cut(s) 15, 616
NlaIII CATG 2 cut(s) 135, 147
NlaIV GGNNCC 1 cut(s) 25
NmuCI GTSAC 1 cut(s) 412
NspI RCATGY 1 cut(s) 135
NspV TTCGAA 1 cut(s) 398
PceI AGGCCT 1 cut(s) 217
PctI GAATGC 1 cut(s) 432
PfeI GAWTC 1 cut(s) 53
PkrI GCNGC 2 cut(s) 6, 328
PmaCI CACGTG 1 cut(s) 112
PmlI CACGTG 1 cut(s) 112
Ppu21I YACGTR 1 cut(s) 112
PsiI TTATAA 1 cut(s) 612
PspCI CACGTG 1 cut(s) 112
PspN4I GGNNCC 1 cut(s) 25
PstI CTGCAG 1 cut(s) 215
PsuI RGATCY 1 cut(s) 616
RsaI GTAC 2 cut(s) 237, 276
RsaNI GTAC 2 cut(s) 236, 275
SaqAI TTAA 2 cut(s) 645, 660
SatI GCNGC 2 cut(s) 5, 327
Sau3AI GATC 2 cut(s) 15, 616
SetI ASST 9 cut(s) 29, 114, 181, 349, 405, 501, 532, 594, 652
SfaNI GCATC 1 cut(s) 94
SfcI CTRYAG 1 cut(s) 211
SfuI TTCGAA 1 cut(s) 398
Sse9I AATT 5 cut(s) 32, 65, 244, 388, 513
SseBI AGGCCT 1 cut(s) 217
SsiI CCGC 4 cut(s) 5, 164, 266, 340
SspI AATATT 1 cut(s) 631
SspMI CTAG 2 cut(s) 128, 224
StuI AGGCCT 1 cut(s) 217
TaaI ACNGT 2 cut(s) 412, 436
TaiI ACGT 1 cut(s) 114
TaqI TCGA 3 cut(s) 14, 51, 398
TasI AATT 5 cut(s) 32, 65, 244, 388, 513
TauI GCSGC 1 cut(s) 7
TfiI GAWTC 1 cut(s) 53
Tru1I TTAA 2 cut(s) 645, 660
Tru9I TTAA 2 cut(s) 645, 660
TseFI GTSAC 1 cut(s) 412
TseI GCWGC 1 cut(s) 326
Tsp45I GTSAC 1 cut(s) 412
XapI RAATTY 1 cut(s) 32
XceI RCATGY 1 cut(s) 135
XspI CTAG 2 cut(s) 128, 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.