pycom17g06050

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
4244742 .. 4245479
738 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g06050.1

Sequence Viewer

Length: 738 bp
ATGGCTGTTCTAAACTCGGTGAAAGTGGTTGAGGTTTGCAAAGTAGCACCGCAACCAAGCACGCCGGACTCATCAGCCATTCCTGAGTCCCTTCCTCTAACCTCGTTCGACTTGCTCTGGCTAAGATTTGCACCCGTCCAACGTCTTTTCTTCTATGAAATCAATAACCCTAACTCCTCGTCCGACACCAACTTCACCCATTCAATACTCATTCCGAAACCCAAAACCTCACTCTCTCTCAGCCTCCAACAATTTCTGCCTCTAGCCGGAAACGTCATATGGCCCAAAGAGTCCCCTAAACCTATTCTCCGTCACGTCCAAGGTGACGGGGTTTTGCTCACCATAGCTGAGTCCGATAGTGATTTCCACCATATAGTTTCAAGCAACAGCTTCAACATTGAAGCCAAAGAATACCATCCTCTCATACCCCAGATGCCCGTGTCTCACGAAAAAGCCGCGGCCATTGCATTGCAGATCACCATATTTCCTAACCGTGGCTTCTGTATTGGAACATCCATGCACCATGTAAATCCTAGACGGCAAGACGTCAACCATCTTTGTGAAAACATGGGCTCACATTTGCAAACACGAAGATTCCAATTTGTTGCCGGAACAGCTCAAACCATTTTTCGACAGAAGCATCATCAAAGACCCCACCGGCCTAGAAGAGATCTACGCGAACCAATTTCGAAACATGGACCGGCCCGACAACAGAAGCTTGATGTCTTCCAAGTTTGA

Protein Analysis

246

Amino Acids

27.72

Weight (kDa)

9.58

Isoelectric Point (pI)

57.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 21 - 190 1.3e-11 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 549
AccII CGCG 2 cut(s) 458, 678
AciI CCGC 3 cut(s) 50, 456, 458
AcoI YGGCCR 1 cut(s) 459
AcyI GRCGYC 1 cut(s) 546
AfiI CCNNNNNNNGG 2 cut(s) 266, 494
AgsI TTSAA 4 cut(s) 204, 381, 394, 401
AjiI CACGTC 1 cut(s) 316
AluBI AGCT 4 cut(s) 347, 390, 617, 718
AluI AGCT 4 cut(s) 347, 390, 617, 718
Alw26I GTCTC 1 cut(s) 447
AoxI GGCC 4 cut(s) 281, 459, 659, 702
AspS9I GGNCC 3 cut(s) 282, 698, 703
AsuHPI GGTGA 5 cut(s) 31, 187, 331, 335, 469
AsuII TTCGAA 1 cut(s) 689
AvaII GGWCC 1 cut(s) 698
BanII GRGCYC 1 cut(s) 575
BbsI GAAGAC 1 cut(s) 718
BccI CCATC 2 cut(s) 423, 561
BceAI ACGGC 1 cut(s) 554
BcoDI GTCTC 1 cut(s) 447
BfaI CTAG 3 cut(s) 263, 534, 663
BglII AGATCT 1 cut(s) 670
BisI GCNGC 2 cut(s) 456, 459
BlsI GCNGC 2 cut(s) 457, 460
Bme18I GGWCC 1 cut(s) 698
BmgBI CACGTC 1 cut(s) 316
BmgT120I GGNCC 3 cut(s) 282, 698, 703
BmsI GCATC 2 cut(s) 423, 649
BpiI GAAGAC 1 cut(s) 718
Bpu14I TTCGAA 1 cut(s) 689
BsaHI GRCGYC 1 cut(s) 546
BsaJI CCNNGG 3 cut(s) 319, 456, 493
BsaXI ACNNNNNCTCC 4 cut(s) 158, 188, 291, 321
Bsc4I CCNNNNNNNGG 2 cut(s) 266, 494
Bse118I RCCGGY 2 cut(s) 657, 700
Bse3DI GCAATG 2 cut(s) 462, 467
BseDI CCNNGG 3 cut(s) 319, 456, 493
BseGI GGATG 2 cut(s) 415, 512
BseLI CCNNNNNNNGG 2 cut(s) 266, 494
BseMI GCAATG 2 cut(s) 462, 467
BseMII CTCAG 3 cut(s) 75, 253, 339
BseRI GAGGAG 1 cut(s) 166
Bsh1236I CGCG 2 cut(s) 458, 678
BshFI GGCC 4 cut(s) 283, 461, 661, 704
BsiSI CCGG 5 cut(s) 65, 267, 609, 658, 701
BslFI GGGAC 2 cut(s) 73, 277
BslI CCNNNNNNNGG 2 cut(s) 266, 494
BsmAI GTCTC 1 cut(s) 447
BsmFI GGGAC 2 cut(s) 73, 277
BsnI GGCC 4 cut(s) 283, 461, 661, 704
Bsp119I TTCGAA 1 cut(s) 689
Bsp1286I GDGCHC 1 cut(s) 575
Bsp143I GATC 2 cut(s) 474, 670
BspACI CCGC 3 cut(s) 50, 456, 458
BspANI GGCC 4 cut(s) 283, 461, 661, 704
BspCNI CTCAG 3 cut(s) 76, 252, 340
BspFNI CGCG 2 cut(s) 458, 678
BspT104I TTCGAA 1 cut(s) 689
BsrDI GCAATG 2 cut(s) 462, 467
BsrFI RCCGGY 2 cut(s) 657, 700
BssAI RCCGGY 2 cut(s) 657, 700
BssECI CCNNGG 3 cut(s) 319, 456, 493
BssMI GATC 2 cut(s) 474, 670
BssNI GRCGYC 1 cut(s) 546
BssT1I CCWWGG 1 cut(s) 319
Bst4CI ACNGT 1 cut(s) 494
Bst6I CTCTTC 1 cut(s) 661
BstACI GRCGYC 1 cut(s) 546
BstBI TTCGAA 1 cut(s) 689
BstC8I GCNNGC 1 cut(s) 62
BstDEI CTNAG 4 cut(s) 84, 122, 239, 348
BstDSI CCRYGG 2 cut(s) 456, 493
BstF5I GGATG 2 cut(s) 415, 512
BstFNI CGCG 2 cut(s) 458, 678
BstKTI GATC 2 cut(s) 477, 673
BstMAI GTCTC 1 cut(s) 447
BstMBI GATC 2 cut(s) 474, 670
BstMWI GCNNNNNNNGC 2 cut(s) 464, 614
BstUI CGCG 2 cut(s) 458, 678
BstV2I GAAGAC 1 cut(s) 718
BstX2I RGATCY 1 cut(s) 670
BstYI RGATCY 1 cut(s) 670
BsuRI GGCC 4 cut(s) 283, 461, 661, 704
BtgI CCRYGG 2 cut(s) 456, 493
BtrI CACGTC 1 cut(s) 316
BtsCI GGATG 2 cut(s) 415, 512
Cac8I GCNNGC 1 cut(s) 62
Cfr10I RCCGGY 2 cut(s) 657, 700
Cfr13I GGNCC 3 cut(s) 282, 698, 703
Cfr42I CCGCGG 1 cut(s) 459
CviAII CATG 4 cut(s) 517, 524, 568, 695
DdeI CTNAG 4 cut(s) 84, 122, 239, 348
DpnI GATC 2 cut(s) 476, 672
DpnII GATC 2 cut(s) 474, 670
EaeI YGGCCR 1 cut(s) 459
Eam1104I CTCTTC 1 cut(s) 661
EarI CTCTTC 1 cut(s) 661
Eco130I CCWWGG 1 cut(s) 319
Eco24I GRGCYC 1 cut(s) 575
Eco47I GGWCC 1 cut(s) 698
EcoT14I CCWWGG 1 cut(s) 319
EcoT38I GRGCYC 1 cut(s) 575
ErhI CCWWGG 1 cut(s) 319
FaeI CATG 4 cut(s) 520, 527, 571, 698
FaqI GGGAC 2 cut(s) 73, 277
FatI CATG 4 cut(s) 516, 523, 567, 694
FauNDI CATATG 1 cut(s) 278
Fnu4HI GCNGC 2 cut(s) 456, 459
FokI GGATG 2 cut(s) 402, 499
FriOI GRGCYC 1 cut(s) 575
Fsp4HI GCNGC 2 cut(s) 456, 459
FspBI CTAG 3 cut(s) 263, 534, 663
GluI GCNGC 2 cut(s) 456, 459
HaeIII GGCC 4 cut(s) 283, 461, 661, 704
HapII CCGG 5 cut(s) 65, 267, 609, 658, 701
Hin1I GRCGYC 1 cut(s) 546
Hin1II CATG 4 cut(s) 520, 527, 571, 698
HincII GTYRAC 1 cut(s) 550
HindII GTYRAC 1 cut(s) 550
HindIII AAGCTT 1 cut(s) 716
HinfI GANTC 5 cut(s) 68, 86, 290, 350, 594
HpaII CCGG 5 cut(s) 65, 267, 609, 658, 701
HphI GGTGA 5 cut(s) 31, 187, 331, 335, 469
Hpy166II GTNNAC 1 cut(s) 550
Hpy188I TCNGA 3 cut(s) 184, 216, 355
Hpy188III TCNNGA 2 cut(s) 83, 446
Hpy8I GTNNAC 1 cut(s) 550
HpyAV CCTTC 1 cut(s) 101
HpyCH4III ACNGT 1 cut(s) 494
HpyCH4IV ACGT 4 cut(s) 142, 273, 315, 546
HpyCH4V TGCA 6 cut(s) 39, 131, 467, 472, 520, 583
HpyF10VI GCNNNNNNNGC 2 cut(s) 464, 614
HpyF3I CTNAG 4 cut(s) 84, 122, 239, 348
HpySE526I ACGT 4 cut(s) 142, 273, 315, 546
Hsp92I GRCGYC 1 cut(s) 546
Hsp92II CATG 4 cut(s) 520, 527, 571, 698
KspI CCGCGG 1 cut(s) 459
Kzo9I GATC 2 cut(s) 474, 670
LpnPI CCDG 8 cut(s) 78, 96, 103, 280, 443, 622, 671, 714
LweI GCATC 2 cut(s) 423, 649
MaeI CTAG 3 cut(s) 263, 534, 663
MaeII ACGT 4 cut(s) 142, 273, 315, 546
MaeIII GTNAC 2 cut(s) 311, 323
MalI GATC 2 cut(s) 476, 672
MboI GATC 2 cut(s) 474, 670
MboII GAAGA 4 cut(s) 142, 603, 678, 718
MflI RGATCY 1 cut(s) 670
MhlI GDGCHC 1 cut(s) 575
MluCI AATT 3 cut(s) 251, 599, 684
MlyI GAGTC 4 cut(s) 62, 95, 299, 359
MmeI TCCRAC 3 cut(s) 163, 207, 271
MnlI CCTC 8 cut(s) 25, 105, 112, 187, 238, 254, 270, 429
MslI CAYNNNNRTG 1 cut(s) 558
MspA1I CMGCKG 1 cut(s) 458
MspI CCGG 5 cut(s) 65, 267, 609, 658, 701
MvnI CGCG 2 cut(s) 458, 678
MwoI GCNNNNNNNGC 2 cut(s) 464, 614
NdeI CATATG 1 cut(s) 278
NdeII GATC 2 cut(s) 474, 670
NlaIII CATG 4 cut(s) 520, 527, 571, 698
NmuCI GTSAC 2 cut(s) 311, 323
NspV TTCGAA 1 cut(s) 689
PfeI GAWTC 1 cut(s) 594
PkrI GCNGC 2 cut(s) 457, 460
PleI GAGTC 4 cut(s) 62, 94, 298, 358
PpsI GAGTC 4 cut(s) 62, 94, 298, 358
PspPI GGNCC 3 cut(s) 282, 698, 703
PsuI RGATCY 1 cut(s) 670
RseI CAYNNNNRTG 1 cut(s) 558
SacII CCGCGG 1 cut(s) 459
SatI GCNGC 2 cut(s) 456, 459
Sau3AI GATC 2 cut(s) 474, 670
Sau96I GGNCC 3 cut(s) 282, 698, 703
SchI GAGTC 4 cut(s) 62, 95, 299, 359
SduI GDGCHC 1 cut(s) 575
SfaNI GCATC 2 cut(s) 423, 649
Sfr303I CCGCGG 1 cut(s) 459
SfuI TTCGAA 1 cut(s) 689
SgrBI CCGCGG 1 cut(s) 459
SinI GGWCC 1 cut(s) 698
SmiMI CAYNNNNRTG 1 cut(s) 558
Sse9I AATT 3 cut(s) 251, 599, 684
SsiI CCGC 3 cut(s) 50, 456, 458
SspMI CTAG 3 cut(s) 263, 534, 663
StyI CCWWGG 1 cut(s) 319
TaaI ACNGT 1 cut(s) 494
TaiI ACGT 4 cut(s) 145, 276, 318, 549
TaqI TCGA 3 cut(s) 108, 631, 689
TasI AATT 3 cut(s) 251, 599, 684
TauI GCSGC 2 cut(s) 458, 461
TfiI GAWTC 1 cut(s) 594
TseFI GTSAC 2 cut(s) 311, 323
Tsp45I GTSAC 2 cut(s) 311, 323
TspDTI ATGAA 1 cut(s) 171
TspGWI ACGGA 1 cut(s) 299
VpaK11BI GGWCC 1 cut(s) 698
XspI CTAG 3 cut(s) 263, 534, 663
ZraI GACGTC 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.