RLG00000029434

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
38736582 .. 38736995
414 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029434

Sequence Viewer

Length: 414 bp
ATGGCAAACTTCTCAGTGAAGAAAGTTGAGGTCTGCAGGGTGGCACCAAAACCAGGTTTACCAGAGAACCAATCACTTCCTCTAACATTCTTCGACTTATTGTGGCTCCGTTTTCAACCCGTAGAACGCCTCCACTTTTACCAAACCTCTTCCACCGATTCCGTACTTTCCAAACTCAAAACCTCCCTCTCTCTCACTCTCCAACACTTCCTACCTCTCGCCGGAAACCTCACCTGGCCCCAAGACTCCGTCAAACCCGTTCTAAGCTACGTTCAAGGCGACGCCGTTTCACTCACCGTAGCTGAGTCCGATGTAGATTTTAACCACCTCATTAATAGCATCTTTCTTGCAACTCAAGATTTCAGTCCTCTTGAGCTGCAAGATTTCCTGCAACGTATTTTGGTAACTGCATAG

Protein Analysis

138

Amino Acids

15.42

Weight (kDa)

5.47

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 113 8.5e-11 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 43
AcyI GRCGYC 1 cut(s) 282
AfaI GTAC 1 cut(s) 165
AfiI CCNNNNNNNGG 2 cut(s) 53, 221
AgsI TTSAA 2 cut(s) 116, 275
AjnI CCWGG 2 cut(s) 52, 233
AluBI AGCT 3 cut(s) 267, 302, 376
AluI AGCT 3 cut(s) 267, 302, 376
AoxI GGCC 1 cut(s) 236
ApeKI GCWGC 1 cut(s) 376
AseI ATTAAT 1 cut(s) 333
AspS9I GGNCC 1 cut(s) 237
AsuHPI GGTGA 2 cut(s) 223, 286
BanI GGYRCC 1 cut(s) 43
BbvI GCAGC 1 cut(s) 363
BceAI ACGGC 1 cut(s) 269
BciT130I CCWGG 2 cut(s) 54, 235
BfmI CTRYAG 1 cut(s) 34
BisI GCNGC 1 cut(s) 377
BlsI GCNGC 1 cut(s) 378
Bme1390I CCNGG 2 cut(s) 54, 235
BmgT120I GGNCC 1 cut(s) 237
BmiI GGNNCC 3 cut(s) 45, 107, 239
BmrFI CCNGG 2 cut(s) 54, 235
BmsI GCATC 1 cut(s) 348
BpuEI CTTGAG 2 cut(s) 339, 392
BsaHI GRCGYC 1 cut(s) 282
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 221
BseBI CCWGG 2 cut(s) 54, 235
BseLI CCNNNNNNNGG 2 cut(s) 53, 221
BseMII CTCAG 2 cut(s) 27, 294
BseXI GCAGC 1 cut(s) 363
BshFI GGCC 1 cut(s) 238
BshNI GGYRCC 1 cut(s) 43
BsiSI CCGG 1 cut(s) 222
BslI CCNNNNNNNGG 2 cut(s) 53, 221
BsnI GGCC 1 cut(s) 238
BspANI GGCC 1 cut(s) 238
BspCNI CTCAG 2 cut(s) 26, 295
BspLI GGNNCC 3 cut(s) 45, 107, 239
BspMAI CTGCAG 1 cut(s) 38
BspT107I GGYRCC 1 cut(s) 43
BssNI GRCGYC 1 cut(s) 282
Bst2UI CCWGG 2 cut(s) 54, 235
Bst4CI ACNGT 1 cut(s) 298
Bst6I CTCTTC 1 cut(s) 154
BstACI GRCGYC 1 cut(s) 282
BstDEI CTNAG 3 cut(s) 13, 263, 303
BstNI CCWGG 2 cut(s) 54, 235
BstSCI CCNGG 2 cut(s) 52, 233
BstSFI CTRYAG 1 cut(s) 34
BstV1I GCAGC 1 cut(s) 363
BsuRI GGCC 1 cut(s) 238
BtsIMutI CAGTG 1 cut(s) 21
Cfr13I GGNCC 1 cut(s) 237
CseI GACGC 1 cut(s) 290
CsiI ACCWGGT 1 cut(s) 52
Csp6I GTAC 1 cut(s) 164
CviJI RGCY 5 cut(s) 106, 238, 267, 302, 376
CviKI_1 RGCY 5 cut(s) 106, 238, 267, 302, 376
CviQI GTAC 1 cut(s) 164
DdeI CTNAG 3 cut(s) 13, 263, 303
Eam1104I CTCTTC 1 cut(s) 154
EarI CTCTTC 1 cut(s) 154
EcoRII CCWGG 2 cut(s) 52, 233
FaiI YATR 1 cut(s) 412
Fnu4HI GCNGC 1 cut(s) 377
Fsp4HI GCNGC 1 cut(s) 377
GluI GCNGC 1 cut(s) 377
HaeIII GGCC 1 cut(s) 238
HapII CCGG 1 cut(s) 222
HgaI GACGC 1 cut(s) 290
Hin1I GRCGYC 1 cut(s) 282
HinfI GANTC 3 cut(s) 158, 245, 305
HpaII CCGG 1 cut(s) 222
HphI GGTGA 2 cut(s) 223, 286
Hpy166II GTNNAC 1 cut(s) 59
Hpy188I TCNGA 1 cut(s) 310
Hpy188III TCNNGA 2 cut(s) 356, 371
Hpy8I GTNNAC 1 cut(s) 59
Hpy99I CGWCG 1 cut(s) 284
HpyCH4III ACNGT 1 cut(s) 298
HpyCH4IV ACGT 2 cut(s) 270, 394
HpyCH4V TGCA 5 cut(s) 36, 350, 379, 391, 410
HpyF3I CTNAG 3 cut(s) 13, 263, 303
HpySE526I ACGT 2 cut(s) 270, 394
Hsp92I GRCGYC 1 cut(s) 282
LmnI GCTCC 1 cut(s) 111
LpnPI CCDG 8 cut(s) 22, 39, 66, 75, 220, 235, 247, 401
Lsp1109I GCAGC 1 cut(s) 363
LweI GCATC 1 cut(s) 348
MabI ACCWGGT 1 cut(s) 52
MaeII ACGT 2 cut(s) 270, 394
MaeIII GTNAC 1 cut(s) 403
MboII GAAGA 3 cut(s) 31, 82, 141
MlyI GAGTC 2 cut(s) 239, 314
MmeI TCCRAC 1 cut(s) 226
MseI TTAA 2 cut(s) 321, 333
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 2 cut(s) 54, 235
MvaI CCWGG 2 cut(s) 54, 235
NlaIV GGNNCC 3 cut(s) 45, 107, 239
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PfeI GAWTC 1 cut(s) 158
PflFI GACNNNGTC 1 cut(s) 248
PkrI GCNGC 1 cut(s) 378
PleI GAGTC 2 cut(s) 239, 313
PpsI GAGTC 2 cut(s) 239, 313
PshBI ATTAAT 1 cut(s) 333
Psp6I CCWGG 2 cut(s) 52, 233
PspGI CCWGG 2 cut(s) 52, 233
PspN4I GGNNCC 3 cut(s) 45, 107, 239
PspPI GGNCC 1 cut(s) 237
PstI CTGCAG 1 cut(s) 38
PsyI GACNNNGTC 1 cut(s) 248
RsaI GTAC 1 cut(s) 165
RsaNI GTAC 1 cut(s) 164
SaqAI TTAA 2 cut(s) 321, 333
SatI GCNGC 1 cut(s) 377
Sau96I GGNCC 1 cut(s) 237
SchI GAGTC 2 cut(s) 239, 314
ScrFI CCNGG 2 cut(s) 54, 235
SexAI ACCWGGT 1 cut(s) 52
SfaNI GCATC 1 cut(s) 348
SfcI CTRYAG 1 cut(s) 34
SmlI CTYRAG 2 cut(s) 354, 371
SmoI CTYRAG 2 cut(s) 354, 371
StyD4I CCNGG 2 cut(s) 52, 233
TaaI ACNGT 1 cut(s) 298
TaiI ACGT 2 cut(s) 273, 397
TaqI TCGA 1 cut(s) 93
TfiI GAWTC 1 cut(s) 158
Tru1I TTAA 2 cut(s) 321, 333
Tru9I TTAA 2 cut(s) 321, 333
TscAI CASTG 1 cut(s) 21
TseI GCWGC 1 cut(s) 376
TspGWI ACGGA 3 cut(s) 98, 151, 238
TspRI CASTG 1 cut(s) 21
Tth111I GACNNNGTC 1 cut(s) 248
VspI ATTAAT 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.