FvH4_6g48750

phenolic glucoside malonyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
36658516 .. 36659430
915 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g48750.t1

Sequence Viewer

Length: 480 bp
ATGAGAGAAGAGAAGAAACTAATTTTAAAGGCAAGAGAAAGACAGGAAAAGAAAGCAGACGTTCCGGAAAGGAAGCGGCTAGAAGAGGTAAAGAGCTGGTGGTGTTTGGCAGTTGCAGAAACAAAAGGGTTGTTGGGTGGAGATGGGTTGGTTGTGGCTTTAACTGCAATTACTGAACCTATGAAGCGTTTGGAAAAAGATGTTTTGAATGGAGCAGAGAATTGGGTTTCAAGATTGAGCAGTGTGCGTAGTGGTAGACTGGTAGGTATTGCTGGCTCACATCGGTTTGGTGTGTATGAGACTGATTCTGGATTCGGAAGACCAAACAAAGTCGAGCTTGTTTCCATTGATAGAACAGGAGCCATATATATTTCAGATACCAAAAATGGTGGTGGAGGCCTTGACGTTGGGTTGGTGTTGAAGAAACATTACATGGATGCTTTTGCTTCTTTATTTGCCAAAGGTCTCAAGGGACATTAA

Protein Analysis

160

Amino Acids

17.48

Weight (kDa)

9.57

Isoelectric Point (pI)

30.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29590 AT3G29635 AT3G29636 AT3G29670 AT3G29680 AT3G29690 AT3G29720 AT5G39050 AT5G39080 AT5G39090 AT5G61160
fragaria_vesca FvH4_6g46740 FvH4_6g46741 FvH4_6g46742 FvH4_6g46743 FvH4_6g46743 FvH4_6g46750 FvH4_6g46770 FvH4_6g46780 FvH4_6g48750 FvH4_6g48770 FvH4_7g01310 FvH4_7g01410
malus_domestica MD09G1060700.v1.1 MD09G1067500.v1.1 MD09G1067900.v1.1 MD09G1068000.v1.1 MD09G1068100.v1.1 MD09G1080400.v1.1 MD09G1080500.v1.1 MD17G1056000.v1.1 MD17G1056100.v1.1 MD17G1060500.v1.1 MD17G1060600.v1.1 MD17G1060700.v1.1 MD17G1060800.v1.1 MD17G1061000.v1.1 MD17G1070900.v1.1 MD17G1071300.v1.1 MD17G1071400.v1.1
prunus_persica Prupe.3G252700_v2.0.a1 Prupe.3G252800_v2.0.a1 Prupe.3G252900_v2.0.a1 Prupe.3G253000_v2.0.a1 Prupe.3G253100_v2.0.a1 Prupe.3G253200_v2.0.a1 Prupe.3G253300_v2.0.a1 Prupe.3G253400_v2.0.a1 Prupe.3G253500_v2.0.a1 Prupe.3G253600_v2.0.a1 Prupe.3G253700_v2.0.a1 Prupe.3G253800_v2.0.a1 Prupe.3G253900_v2.0.a1 Prupe.3G254000_v2.0.a1 Prupe.3G254200_v2.0.a1 Prupe.3G254300_v2.0.a1 Prupe.3G254400_v2.0.a1
pyrus_communis pycom09g00710 pycom111g05670 pycom111g05680 pycom111g05700 pycom111g05710 pycom111g05720 pycom12433g00160 pycom17g05440 pycom17g05520 pycom17g06020 pycom17g06030 pycom17g06040 pycom17g06050 pycom17g06060 pycom17g07080
rosa_chinensis RchiOBHm_Chr1g0317141 RchiOBHm_Chr1g0317151 RchiOBHm_Chr1g0317191 RchiOBHm_Chr1g0317201 RchiOBHm_Chr1g0317211 RchiOBHm_Chr1g0334681 RchiOBHm_Chr1g0334691 RchiOBHm_Chr2g0165681 RchiOBHm_Chr2g0165721 RchiOBHm_Chr2g0165731 RchiOBHm_Chr2g0165741 RchiOBHm_Chr2g0165751 RchiOBHm_Chr2g0165771 RchiOBHm_Chr2g0165781 RchiOBHm_Chr5g0029321 RchiOBHm_Chr5g0029331
rosa_laevigata RLG00000021545 RLG00000021546 RLG00000021548 RLG00000021549 RLG00000021550 RLG00000021551 RLG00000021552 RLG00000029433 RLG00000029434 RLG00000029435 RLG00000029439 RLG00000029441 RLG00000029442 RLG00000030618 RLG00000030619 RLG00000030620 RLG00000030622 RLG00000033153 RLG00000033154 RLG00000033155 RLG00000033156
rosa_multiflora Rmu_co7981466.1_g000001 Rmu_co8034280.1_g000001 Rmu_co8243107.1_g000001 Rmu_co8406929.1_g000001 Rmu_sc0000802.1_g000001 Rmu_sc0002295.1_g000005 Rmu_sc0003227.1_g000026 Rmu_sc0003227.1_g000028 Rmu_sc0003227.1_g000029 Rmu_sc0003227.1_g000030 Rmu_sc0003227.1_g000031 Rmu_sc0003689.1_g000001 Rmu_sc0003689.1_g000007 Rmu_sc0004137.1_g000001 Rmu_sc0004205.1_g000004 Rmu_sc0006595.1_g000001 Rmu_sc0006595.1_g000002 Rmu_sc0006595.1_g000003 Rmu_sc0006595.1_g000005 Rmu_sc0009268.1_g000003 Rmu_sc0009268.1_g000004 Rmu_sc0009268.1_g000005 Rmu_sc0009268.1_g000012 Rmu_sc0010198.1_g000001 Rmu_sc0010198.1_g000003 Rmu_sc0010463.1_g000008 Rmu_sc0011453.1_g000001 Rmu_sc0013848.1_g000001 Rmu_sc0013964.1_g000002 Rmu_sc0020734.1_g000001 Rmu_sc0021275.1_g000001 Rmu_sc0024807.1_g000001
rosa_roxburghii Rroxscaffold_1G00039060 Rroxscaffold_2G00085550 Rroxscaffold_2G00085570 Rroxscaffold_2G00085590 Rroxscaffold_2G00085600 Rroxscaffold_2G00085630 Rroxscaffold_2G00085660 Rroxscaffold_2G00085670 Rroxscaffold_4G00316670 Rroxscaffold_4G00316720 Rroxscaffold_4G00316730 Rroxscaffold_4G00330570 Rroxscaffold_4G00330590 Rroxscaffold_4G00330600 Rroxscaffold_4G00330620
rosa_rugosa Rorug01G0014900 Rorug01G0015000 Rorug01G0015200 Rorug01G0114800 Rorug01G0114800 Rorug02G0516600 Rorug02G0516700 Rorug02G0516800 Rorug02G0516900 Rorug02G0517000 Rorug02G0517100 Rorug02G0517200 Rorug02G0517300 Rorug05G0113300
rosa_samantha Rh1BG022500 Rh1BG022600 Rh1BG106200 Rh1BG106400 Rh1BG106500 Rh2AG557600 Rh2CG564900 Rh2CG565000 Rh2CG565100 Rh2CG565200 Rh2CG565400 Rh2CG565500 Rh2CG565600 Rh2CG565700 Rh5CG225500 Rh5CG225600
rosa_wichuraiana Rw0G011340 Rw0G011350 Rw0G011360 Rw0G016000 Rw0G016010 Rw0G016020 Rw0G016030 Rw1G001820 Rw1G001830 Rw1G011540 Rw1G011550 Rw2G048610 Rw2G048620 Rw2G048630 Rw5G018670 Rw5G018680 Rw5G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 256
AccIII TCCGGA 1 cut(s) 64
AciI CCGC 1 cut(s) 76
AgsI TTSAA 3 cut(s) 208, 231, 421
AluBI AGCT 2 cut(s) 96, 337
AluI AGCT 2 cut(s) 96, 337
Alw26I GTCTC 2 cut(s) 293, 470
Aor13HI TCCGGA 1 cut(s) 64
AoxI GGCC 1 cut(s) 397
BarI GAAGNNNNNNTAC 2 cut(s) 413, 445
BbsI GAAGAC 1 cut(s) 325
BccI CCATC 1 cut(s) 137
BcoDI GTCTC 2 cut(s) 293, 470
BfaI CTAG 1 cut(s) 80
BisI GCNGC 1 cut(s) 77
BlsI GCNGC 1 cut(s) 78
BmiI GGNNCC 1 cut(s) 361
BmsI GCATC 1 cut(s) 427
BpiI GAAGAC 1 cut(s) 325
BpuEI CTTGAG 1 cut(s) 452
BsaI GGTCTC 1 cut(s) 470
BsaWI WCCGGW 1 cut(s) 64
Bse1I ACTGG 1 cut(s) 264
BseAI TCCGGA 1 cut(s) 64
BseGI GGATG 1 cut(s) 442
BseNI ACTGG 1 cut(s) 264
BshFI GGCC 1 cut(s) 399
BsiSI CCGG 1 cut(s) 65
BsmAI GTCTC 2 cut(s) 293, 470
BsnI GGCC 1 cut(s) 399
Bso31I GGTCTC 1 cut(s) 470
Bsp13I TCCGGA 1 cut(s) 64
BspACI CCGC 1 cut(s) 76
BspANI GGCC 1 cut(s) 399
BspEI TCCGGA 1 cut(s) 64
BspLI GGNNCC 1 cut(s) 361
BspTNI GGTCTC 1 cut(s) 470
BsrI ACTGG 1 cut(s) 264
Bst6I CTCTTC 2 cut(s) 3, 78
BstC8I GCNNGC 1 cut(s) 274
BstF5I GGATG 1 cut(s) 442
BstMAI GTCTC 2 cut(s) 293, 470
BstMWI GCNNNNNNNGC 1 cut(s) 164
BstV2I GAAGAC 1 cut(s) 325
BsuRI GGCC 1 cut(s) 399
BtsCI GGATG 1 cut(s) 442
BtsI GCAGTG 1 cut(s) 247
BtsIMutI CAGTG 1 cut(s) 247
Cac8I GCNNGC 1 cut(s) 274
CspCI CAANNNNNGTGG 2 cut(s) 370, 405
CviAII CATG 1 cut(s) 433
CviJI RGCY 7 cut(s) 79, 96, 158, 276, 337, 362, 399
CviKI_1 RGCY 7 cut(s) 79, 96, 158, 276, 337, 362, 399
DraI TTTAAA 1 cut(s) 27
Eam1104I CTCTTC 2 cut(s) 3, 78
EarI CTCTTC 2 cut(s) 3, 78
Eco147I AGGCCT 1 cut(s) 399
Eco31I GGTCTC 1 cut(s) 470
FaeI CATG 1 cut(s) 436
FaiI YATR 6 cut(s) 182, 297, 365, 367, 369, 434
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FatI CATG 1 cut(s) 432
FblI GTMKAC 1 cut(s) 256
Fnu4HI GCNGC 1 cut(s) 77
FokI GGATG 1 cut(s) 449
Fsp4HI GCNGC 1 cut(s) 77
FspBI CTAG 1 cut(s) 80
GluI GCNGC 1 cut(s) 77
HaeIII GGCC 1 cut(s) 399
HapII CCGG 1 cut(s) 65
Hin1II CATG 1 cut(s) 436
HinfI GANTC 2 cut(s) 305, 312
HpaII CCGG 1 cut(s) 65
Hpy166II GTNNAC 1 cut(s) 257
Hpy188I TCNGA 2 cut(s) 317, 376
Hpy188III TCNNGA 3 cut(s) 65, 231, 309
Hpy8I GTNNAC 1 cut(s) 257
HpyCH4IV ACGT 2 cut(s) 60, 405
HpyCH4V TGCA 2 cut(s) 116, 167
HpyF10VI GCNNNNNNNGC 1 cut(s) 164
HpySE526I ACGT 2 cut(s) 60, 405
Hsp92II CATG 1 cut(s) 436
Kpn2I TCCGGA 1 cut(s) 64
LmnI GCTCC 2 cut(s) 212, 359
LpnPI CCDG 7 cut(s) 29, 78, 82, 245, 258, 294, 342
LweI GCATC 1 cut(s) 427
MaeI CTAG 1 cut(s) 80
MaeII ACGT 2 cut(s) 60, 405
MboII GAAGA 5 cut(s) 20, 25, 95, 330, 433
MluCI AATT 3 cut(s) 21, 168, 220
MnlI CCTC 2 cut(s) 79, 389
MroI TCCGGA 1 cut(s) 64
MseI TTAA 3 cut(s) 26, 161, 478
MspI CCGG 1 cut(s) 65
MwoI GCNNNNNNNGC 1 cut(s) 164
NlaIII CATG 1 cut(s) 436
NlaIV GGNNCC 1 cut(s) 361
PceI AGGCCT 1 cut(s) 399
PfeI GAWTC 2 cut(s) 305, 312
PkrI GCNGC 1 cut(s) 78
PspN4I GGNNCC 1 cut(s) 361
SaqAI TTAA 3 cut(s) 26, 161, 478
SatI GCNGC 1 cut(s) 77
SetI ASST 8 cut(s) 63, 90, 98, 181, 268, 339, 408, 466
SfaNI GCATC 1 cut(s) 427
SmlI CTYRAG 1 cut(s) 467
SmoI CTYRAG 1 cut(s) 467
Sse9I AATT 3 cut(s) 21, 168, 220
SseBI AGGCCT 1 cut(s) 399
SsiI CCGC 1 cut(s) 76
SspMI CTAG 1 cut(s) 80
StuI AGGCCT 1 cut(s) 399
TaiI ACGT 2 cut(s) 63, 408
TaqI TCGA 1 cut(s) 333
TasI AATT 3 cut(s) 21, 168, 220
TauI GCSGC 1 cut(s) 79
TfiI GAWTC 2 cut(s) 305, 312
Tru1I TTAA 3 cut(s) 26, 161, 478
Tru9I TTAA 3 cut(s) 26, 161, 478
TscAI CASTG 1 cut(s) 247
TspDTI ATGAA 1 cut(s) 197
TspRI CASTG 1 cut(s) 247
XmiI GTMKAC 1 cut(s) 256
XspI CTAG 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.