Rmu_sc0010640.1_g000009

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010640.1
Physical Location & Seq
Reverse (-)
77832 .. 79040
1209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010640.1_g000009.1.cds

Sequence Viewer

Length: 996 bp
atggctcgaaccaaggtaacccctcgcagcggcgtcaatcaacgccgtgttctctctttggaggaagaaggtcgtcaggcggccactagagctgggcttactcttccatgggaccatcggcctatccgtgagcgtacccgcagtccccctcctctgcctcgtcgctctcccagactgcatcccggagagtcttcttcctcaccagctgctcgtactcctcggcctatggccaccctggaaagcttgtcggattttattgatgatttgcgttcctctctccgcgatggtattatggtgacagattggagagtcaattgcatgatcgattacatctctgagatgaactgctctttgatccgctgtcacactgcaataaacaagcttgctcaggaagtcaataacttgcagagttatcctcctgggtttccccgcaaggacgctactgcatcacaccatgaggaccctcctcaggaagctgaaaccagcaagagggctgccactcgccagcataccgctcctccaaaggagcttttggtgttcccggaaacgacgtcgtcgagttcggggtacgtttggaccgggcctcagggtactccgggttacctggacccggattaccaccggtcgttccggttgacggataagagtgacgtgtacagcttcggggtggtgctgttggagttgatttcgggtcagaaggcggtggaccagaggagggacaagagggagttggctttggcggatatgatggtgtccaagatccagatgggcctgctcgatcaggtagtcgacccggttctgattatggatgggaatgtgacggatggtgttgacgtggcggcagagctggcgttcaggtgcgtcgcggcggagaaggacgaccgtccagatgcgagggaggtggtgcaggagctgaggcggatcaggggccgtacacgtgggattagccgcgcttcgagtgcgaatgtgattggtgctgacgtggcaaaaagctga

Protein Analysis

331

Amino Acids

36.79

Weight (kDa)

8.67

Isoelectric Point (pI)

49.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 554
AccBSI CCGCTC 1 cut(s) 515
AccI GTMKAC 1 cut(s) 789
AccII CGCG 3 cut(s) 282, 866, 951
AclWI GGATC 3 cut(s) 349, 754, 929
AcoI YGGCCR 2 cut(s) 81, 228
AcvI CACGTG 1 cut(s) 938
AcyI GRCGYC 2 cut(s) 33, 551
AfaI GTAC 6 cut(s) 136, 214, 569, 592, 656, 934
AfiI CCNNNNNNNGG 6 cut(s) 29, 469, 489, 610, 637, 715
AflIII ACRYGT 2 cut(s) 651, 935
AgeI ACCGGT 1 cut(s) 621
AjiI CACGTC 3 cut(s) 652, 835, 982
AjnI CCWGG 3 cut(s) 234, 418, 603
AlwI GGATC 3 cut(s) 349, 754, 929
AlwNI CAGNNNCTG 1 cut(s) 913
AoxI GGCC 7 cut(s) 81, 119, 221, 228, 581, 769, 928
ApeKI GCWGC 3 cut(s) 27, 206, 494
AsiGI ACCGGT 1 cut(s) 621
AspLEI GCGC 1 cut(s) 953
AspS9I GGNCC 8 cut(s) 112, 460, 576, 581, 607, 706, 769, 928
AsuC2I CCSGG 6 cut(s) 183, 542, 580, 597, 611, 794
AsuHPI GGTGA 2 cut(s) 192, 307
AvaII GGWCC 5 cut(s) 112, 460, 576, 607, 706
AxyI CCTNAGG 2 cut(s) 468, 585
BalI TGGCCA 1 cut(s) 230
BbrPI CACGTG 1 cut(s) 938
BbsI GAAGAC 1 cut(s) 183
BbvCI CCTCAGC 1 cut(s) 914
BbvI GCAGC 3 cut(s) 39, 193, 481
BccI CCATC 6 cut(s) 123, 278, 742, 760, 803, 818
BceAI ACGGC 2 cut(s) 30, 915
BciT130I CCWGG 3 cut(s) 236, 420, 605
BcnI CCSGG 6 cut(s) 183, 542, 580, 597, 611, 794
BfaI CTAG 1 cut(s) 87
BisI GCNGC 8 cut(s) 28, 31, 81, 207, 495, 840, 867, 949
BlsI GCNGC 8 cut(s) 29, 32, 82, 208, 496, 841, 868, 950
Bme1390I CCNGG 9 cut(s) 183, 236, 420, 542, 580, 597, 605, 611, 794
Bme18I GGWCC 5 cut(s) 112, 460, 576, 607, 706
BmgBI CACGTC 3 cut(s) 652, 835, 982
BmgT120I GGNCC 8 cut(s) 112, 460, 576, 581, 607, 706, 769, 928
BmiI GGNNCC 4 cut(s) 113, 462, 609, 929
BmrFI CCNGG 9 cut(s) 183, 236, 420, 542, 580, 597, 605, 611, 794
BmsI GCATC 3 cut(s) 187, 455, 880
BoxI GACNNNNGTC 1 cut(s) 882
BpiI GAAGAC 1 cut(s) 183
BplI GAGNNNNNCTC 2 cut(s) 400, 432
Bpu10I CCTNAGC 2 cut(s) 387, 914
BpuMI CCSGG 6 cut(s) 183, 542, 580, 597, 611, 794
Bsa29I ATCGAT 1 cut(s) 324
BsaAI YACGTR 1 cut(s) 938
BsaHI GRCGYC 2 cut(s) 33, 551
BsaJI CCNNGG 5 cut(s) 12, 107, 218, 234, 419
BsaWI WCCGGW 2 cut(s) 621, 630
BsaXI ACNNNNNCTCC 2 cut(s) 502, 532
Bsc4I CCNNNNNNNGG 6 cut(s) 29, 469, 489, 610, 637, 715
Bse118I RCCGGY 1 cut(s) 621
Bse21I CCTNAGG 2 cut(s) 468, 585
BseBI CCWGG 3 cut(s) 236, 420, 605
BseCI ATCGAT 1 cut(s) 324
BseDI CCNNGG 5 cut(s) 12, 107, 218, 234, 419
BseGI GGATG 3 cut(s) 178, 814, 829
BseLI CCNNNNNNNGG 6 cut(s) 29, 469, 489, 610, 637, 715
BseMII CTCAG 5 cut(s) 327, 401, 482, 599, 905
BseRI GAGGAG 5 cut(s) 141, 207, 456, 507, 727
BseXI GCAGC 3 cut(s) 39, 193, 481
BseYI CCCAGC 1 cut(s) 92
BsgI GTGCAG 1 cut(s) 926
Bsh1236I CGCG 3 cut(s) 282, 866, 951
Bsh1285I CGRYCG 2 cut(s) 626, 883
BshFI GGCC 7 cut(s) 83, 121, 223, 230, 583, 771, 930
BshTI ACCGGT 1 cut(s) 621
BshVI ATCGAT 1 cut(s) 324
BsiEI CGRYCG 2 cut(s) 626, 883
BsiSI CCGG 8 cut(s) 183, 542, 579, 596, 611, 622, 631, 794
BslFI GGGAC 3 cut(s) 125, 129, 731
BslI CCNNNNNNNGG 6 cut(s) 29, 469, 489, 610, 637, 715
BsmFI GGGAC 3 cut(s) 125, 129, 731
BsnI GGCC 7 cut(s) 83, 121, 223, 230, 583, 771, 930
Bsp1407I TGTACA 1 cut(s) 654
Bsp143I GATC 5 cut(s) 321, 354, 759, 778, 921
Bsp19I CCATGG 1 cut(s) 107
BspANI GGCC 7 cut(s) 83, 121, 223, 230, 583, 771, 930
BspCNI CTCAG 5 cut(s) 328, 400, 481, 598, 906
BspDI ATCGAT 1 cut(s) 324
BspFNI CGCG 3 cut(s) 282, 866, 951
BspLI GGNNCC 4 cut(s) 113, 462, 609, 929
BspPI GGATC 3 cut(s) 349, 754, 929
BsrBI CCGCTC 1 cut(s) 515
BsrFI RCCGGY 1 cut(s) 621
BsrGI TGTACA 1 cut(s) 654
BssAI RCCGGY 1 cut(s) 621
BssECI CCNNGG 5 cut(s) 12, 107, 218, 234, 419
BssMI GATC 5 cut(s) 321, 354, 759, 778, 921
BssNI GRCGYC 2 cut(s) 33, 551
BssT1I CCWWGG 2 cut(s) 12, 107
Bst2UI CCWGG 3 cut(s) 236, 420, 605
Bst4CI ACNGT 1 cut(s) 884
Bst6I CTCTTC 1 cut(s) 108
BstACI GRCGYC 2 cut(s) 33, 551
BstAUI TGTACA 1 cut(s) 654
BstBAI YACGTR 1 cut(s) 938
BstC8I GCNNGC 4 cut(s) 384, 506, 773, 849
BstDEI CTNAG 5 cut(s) 336, 387, 468, 585, 914
BstDSI CCRYGG 1 cut(s) 107
BstEII GGTNACC 2 cut(s) 16, 599
BstF5I GGATG 3 cut(s) 178, 814, 829
BstFNI CGCG 3 cut(s) 282, 866, 951
BstHHI GCGC 1 cut(s) 953
BstKTI GATC 5 cut(s) 324, 357, 762, 781, 924
BstMBI GATC 5 cut(s) 321, 354, 759, 778, 921
BstMCI CGRYCG 2 cut(s) 626, 883
BstMWI GCNNNNNNNGC 4 cut(s) 89, 848, 959, 983
BstNI CCWGG 3 cut(s) 236, 420, 605
BstPAI GACNNNNGTC 1 cut(s) 882
BstPI GGTNACC 2 cut(s) 16, 599
BstSCI CCNGG 9 cut(s) 181, 234, 418, 540, 578, 595, 603, 609, 792
BstUI CGCG 3 cut(s) 282, 866, 951
BstV1I GCAGC 3 cut(s) 39, 193, 481
BstV2I GAAGAC 1 cut(s) 183
BstX2I RGATCY 1 cut(s) 759
BstYI RGATCY 1 cut(s) 759
Bsu15I ATCGAT 1 cut(s) 324
Bsu36I CCTNAGG 2 cut(s) 468, 585
BsuRI GGCC 7 cut(s) 83, 121, 223, 230, 583, 771, 930
BsuTUI ATCGAT 1 cut(s) 324
BtgI CCRYGG 1 cut(s) 107
BtgZI GCGATG 1 cut(s) 297
BtrI CACGTC 3 cut(s) 652, 835, 982
BtsCI GGATG 3 cut(s) 178, 814, 829
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 1 cut(s) 366
Cac8I GCNNGC 4 cut(s) 384, 506, 773, 849
CaiI CAGNNNCTG 1 cut(s) 913
CfoI GCGC 1 cut(s) 953
Cfr10I RCCGGY 1 cut(s) 621
Cfr13I GGNCC 8 cut(s) 112, 460, 576, 581, 607, 706, 769, 928
ClaI ATCGAT 1 cut(s) 324
CseI GACGC 3 cut(s) 22, 446, 850
Csp6I GTAC 6 cut(s) 135, 213, 568, 591, 655, 933
CspAI ACCGGT 1 cut(s) 621
CviAII CATG 3 cut(s) 108, 319, 455
CviQI GTAC 6 cut(s) 135, 213, 568, 591, 655, 933
DdeI CTNAG 5 cut(s) 336, 387, 468, 585, 914
DpnI GATC 5 cut(s) 323, 356, 761, 780, 923
DpnII GATC 5 cut(s) 321, 354, 759, 778, 921
EaeI YGGCCR 2 cut(s) 81, 228
Eam1104I CTCTTC 1 cut(s) 108
EarI CTCTTC 1 cut(s) 108
EciI GGCGGA 3 cut(s) 755, 884, 934
Eco130I CCWWGG 2 cut(s) 12, 107
Eco47I GGWCC 5 cut(s) 112, 460, 576, 607, 706
Eco72I CACGTG 1 cut(s) 938
Eco81I CCTNAGG 2 cut(s) 468, 585
Eco91I GGTNACC 2 cut(s) 16, 599
EcoO109I RGGNCCY 1 cut(s) 460
EcoO65I GGTNACC 2 cut(s) 16, 599
EcoRII CCWGG 3 cut(s) 234, 418, 603
EcoT14I CCWWGG 2 cut(s) 12, 107
ErhI CCWWGG 2 cut(s) 12, 107
FaeI CATG 3 cut(s) 111, 322, 458
FaiI YATR 8 cut(s) 109, 227, 293, 320, 456, 510, 746, 806
FaqI GGGAC 3 cut(s) 125, 129, 731
FatI CATG 3 cut(s) 107, 318, 454
FauI CCCGC 2 cut(s) 146, 437
FblI GTMKAC 1 cut(s) 789
Fnu4HI GCNGC 8 cut(s) 28, 31, 81, 207, 495, 840, 867, 949
FokI GGATG 3 cut(s) 165, 821, 836
Fsp4HI GCNGC 8 cut(s) 28, 31, 81, 207, 495, 840, 867, 949
FspBI CTAG 1 cut(s) 87
GlaI GCGC 1 cut(s) 952
GluI GCNGC 8 cut(s) 28, 31, 81, 207, 495, 840, 867, 949
GsaI CCCAGC 1 cut(s) 96
HaeIII GGCC 7 cut(s) 83, 121, 223, 230, 583, 771, 930
HapII CCGG 8 cut(s) 183, 542, 579, 596, 611, 622, 631, 794
HgaI GACGC 3 cut(s) 22, 446, 850
HhaI GCGC 1 cut(s) 953
Hin1I GRCGYC 2 cut(s) 33, 551
Hin1II CATG 3 cut(s) 111, 322, 458
Hin6I GCGC 1 cut(s) 951
HinP1I GCGC 1 cut(s) 951
HincII GTYRAC 3 cut(s) 636, 790, 832
HindII GTYRAC 3 cut(s) 636, 790, 832
HindIII AAGCTT 2 cut(s) 241, 380
HinfI GANTC 2 cut(s) 188, 309
HpaII CCGG 8 cut(s) 183, 542, 579, 596, 611, 622, 631, 794
HphI GGTGA 2 cut(s) 192, 307
Hpy166II GTNNAC 6 cut(s) 636, 655, 706, 790, 832, 935
Hpy188I TCNGA 4 cut(s) 250, 337, 696, 801
Hpy188III TCNNGA 4 cut(s) 389, 470, 763, 887
Hpy8I GTNNAC 6 cut(s) 636, 655, 706, 790, 832, 935
Hpy99I CGWCG 5 cut(s) 165, 553, 556, 559, 866
HpyAV CCTTC 3 cut(s) 62, 691, 868
HpyCH4III ACNGT 1 cut(s) 884
HpyCH4IV ACGT 6 cut(s) 551, 570, 651, 834, 937, 981
HpyCH4V TGCA 6 cut(s) 178, 318, 371, 406, 446, 907
HpyF10VI GCNNNNNNNGC 4 cut(s) 89, 848, 959, 983
HpyF3I CTNAG 5 cut(s) 336, 387, 468, 585, 914
HpySE526I ACGT 6 cut(s) 551, 570, 651, 834, 937, 981
Hsp92I GRCGYC 2 cut(s) 33, 551
Hsp92II CATG 3 cut(s) 111, 322, 458
HspAI GCGC 1 cut(s) 951
Kzo9I GATC 5 cut(s) 321, 354, 759, 778, 921
LmnI GCTCC 3 cut(s) 520, 526, 910
Lsp1109I GCAGC 3 cut(s) 39, 193, 481
LweI GCATC 3 cut(s) 187, 455, 880
MaeI CTAG 1 cut(s) 87
MaeII ACGT 6 cut(s) 551, 570, 651, 834, 937, 981
MaeIII GTNAC 6 cut(s) 16, 295, 362, 599, 647, 817
MalI GATC 5 cut(s) 323, 356, 761, 780, 923
MbiI CCGCTC 1 cut(s) 515
MboI GATC 5 cut(s) 321, 354, 759, 778, 921
MboII GAAGA 4 cut(s) 77, 95, 183, 186
MfeI CAATTG 1 cut(s) 313
MflI RGATCY 1 cut(s) 759
MlsI TGGCCA 1 cut(s) 230
MluCI AATT 1 cut(s) 313
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 2 cut(s) 197, 318
MmeI TCCRAC 2 cut(s) 228, 657
Mox20I TGGCCA 1 cut(s) 230
MscI TGGCCA 1 cut(s) 230
Msp20I TGGCCA 1 cut(s) 230
MspA1I CMGCKG 3 cut(s) 30, 206, 360
MspI CCGG 8 cut(s) 183, 542, 579, 596, 611, 622, 631, 794
MspR9I CCNGG 9 cut(s) 183, 236, 420, 542, 580, 597, 605, 611, 794
MunI CAATTG 1 cut(s) 313
MvaI CCWGG 3 cut(s) 236, 420, 605
MvnI CGCG 3 cut(s) 282, 866, 951
MwoI GCNNNNNNNGC 4 cut(s) 89, 848, 959, 983
NciI CCSGG 6 cut(s) 183, 542, 580, 597, 611, 794
NcoI CCATGG 1 cut(s) 107
NdeII GATC 5 cut(s) 321, 354, 759, 778, 921
NlaIII CATG 3 cut(s) 111, 322, 458
NlaIV GGNNCC 4 cut(s) 113, 462, 609, 929
NmeAIII GCCGAG 1 cut(s) 199
NmuCI GTSAC 4 cut(s) 295, 362, 647, 817
PcsI WCGNNNNNNNCGW 2 cut(s) 124, 554
PflFI GACNNNGTC 1 cut(s) 553
PfoI TCCNGGA 2 cut(s) 181, 540
PinAI ACCGGT 1 cut(s) 621
PkrI GCNGC 8 cut(s) 29, 32, 82, 208, 496, 841, 868, 950
PleI GAGTC 2 cut(s) 196, 317
PmaCI CACGTG 1 cut(s) 938
PmlI CACGTG 1 cut(s) 938
PpsI GAGTC 2 cut(s) 196, 317
Ppu21I YACGTR 1 cut(s) 938
PpuMI RGGWCCY 1 cut(s) 460
PshAI GACNNNNGTC 1 cut(s) 882
Psp5II RGGWCCY 1 cut(s) 460
Psp6I CCWGG 3 cut(s) 234, 418, 603
PspCI CACGTG 1 cut(s) 938
PspEI GGTNACC 2 cut(s) 16, 599
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 3 cut(s) 234, 418, 603
PspN4I GGNNCC 4 cut(s) 113, 462, 609, 929
PspPI GGNCC 8 cut(s) 112, 460, 576, 581, 607, 706, 769, 928
PspPPI RGGWCCY 1 cut(s) 460
PstNI CAGNNNCTG 1 cut(s) 913
PsuI RGATCY 1 cut(s) 759
PsyI GACNNNGTC 1 cut(s) 553
PvuII CAGCTG 1 cut(s) 206
RsaI GTAC 6 cut(s) 136, 214, 569, 592, 656, 934
RsaNI GTAC 6 cut(s) 135, 213, 568, 591, 655, 933
SalI GTCGAC 1 cut(s) 788
SatI GCNGC 8 cut(s) 28, 31, 81, 207, 495, 840, 867, 949
Sau3AI GATC 5 cut(s) 321, 354, 759, 778, 921
Sau96I GGNCC 8 cut(s) 112, 460, 576, 581, 607, 706, 769, 928
SchI GAGTC 2 cut(s) 197, 318
ScrFI CCNGG 9 cut(s) 183, 236, 420, 542, 580, 597, 605, 611, 794
SfaNI GCATC 3 cut(s) 187, 455, 880
SinI GGWCC 5 cut(s) 112, 460, 576, 607, 706
Sse9I AATT 1 cut(s) 313
SspMI CTAG 1 cut(s) 87
StyD4I CCNGG 9 cut(s) 181, 234, 418, 540, 578, 595, 603, 609, 792
StyI CCWWGG 2 cut(s) 12, 107
TaaI ACNGT 1 cut(s) 884
TaiI ACGT 6 cut(s) 554, 573, 654, 837, 940, 984
TaqI TCGA 6 cut(s) 7, 324, 557, 777, 789, 956
TasI AATT 1 cut(s) 313
TatI WGTACW 1 cut(s) 654
TauI GCSGC 5 cut(s) 33, 83, 842, 869, 951
TscAI CASTG 1 cut(s) 373
TseFI GTSAC 4 cut(s) 295, 362, 647, 817
TseI GCWGC 3 cut(s) 27, 206, 494
Tsp45I GTSAC 4 cut(s) 295, 362, 647, 817
TspDTI ATGAA 1 cut(s) 356
TspGWI ACGGA 3 cut(s) 116, 653, 836
TspRI CASTG 1 cut(s) 373
Tth111I GACNNNGTC 1 cut(s) 553
VpaK11BI GGWCC 5 cut(s) 112, 460, 576, 607, 706
XcmI CCANNNNNNNNNTGG 1 cut(s) 763
XmiI GTMKAC 1 cut(s) 789
XspI CTAG 1 cut(s) 87
ZraI GACGTC 1 cut(s) 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.