Rmu_sc0010700.1_g000001

Protein NRT1 PTR FAMILY

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010700.1
Physical Location & Seq
Reverse (-)
1231 .. 3920
2690 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010700.1_g000001.1.cds

Sequence Viewer

Length: 1773 bp
atggaggagaaaatgagtgggtatgtggccgatgctctggactacaaagggtttcctgctgataagtccagaactggtggttgggttgccgcggcacttatactaggaattgaaatatgtgaaaggctatcaactatgggaatagcagtgaacctggtgacatacctagttgggacaatgcatttgccaagctcaacttcagcaaatattgtcacagactttgcaggcacatccttcctcctttgtttgctaggaggcttcctcgccgattccttccttggcagatacaagaccattgcaatctttgcttcaatacagacattgggcataattgcattagcaatatcagtaaaattgccacagctgcggccacctcattgtgacatcactgctgccaacaacaactgcaaacaagccaatgacttccaaacgggattcctttacttggctttatatataattgcattagggactggtgggttgaaatcaagtgtttcaggatttggaactgatcaatttgatgaaaaaaatgacagagagaaagcgcagatggcatatttcttcaatagatttttctttttcattagcactggaaccttgatggcagtcacagtccttgtctacatacaagacaaagtggacagaagctgggcctatggaatatgttccatttcaatgttcatagccatcttggtgtttttttcggggactaaaagatacagatataagaaaagcttgggaagtcccatagttcaaatttttcaggttattgtggctgctataaggaagagaaagatgccacttccattcgacgttgccttgttgtatgagaattatcccgaggcttcaagaactggtcacacagatcagttccgtgttgatactcatctggttcaattttcatatagtttcatggacaaggcatctattgtggcagaagaagattcccagagaaatgaaccagcaggttctgttccgaacccatggactttatgctcagttacaagagtggaggaggtgaaaatgatggtgaaactacttccgatatgggccacaaccatcatgttttggacagcatacgcacagatgctcaccttctcagtagaacaagcatccaccatggagagatccattggaaagtttcaaatcccagctggctctctcacagtcttctttgtgttggccatattgatcacattggctgttaatgaccgtctcattatgcctatttggaagaaatggaagggccaagcaggtttcaccaatctacagagaattgcaattggccttgtcctatcggctcttggaatggcagcggcagcactaaccgagaggaagcggttatcagtggctaaagaaatgagaactatgagtacaggttctctgcctattagtgtgtacttgttaatcccacaattcttcttggtgggttctggtgaagctttcatctacactggccagctagatttctttataactcaatcaccaaaaggaatgaaaactatgagcacaggactcttcctgagcactttatcactaggcttctttgtcagtagcttcttggtttcaattgtgaggaggttcaccggaagcaaagatgggcaaggatggcttgcagacaatatcaactatggaaggcttgactgtttctatggacttttgagcgttttaagtatcataaattttgtagcatatcttgtttgtgcaagatggtacaagccaagaaaacctaccaaaccatccaacggttcctcagctgaggataggtgttag
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

590

Amino Acids

65.35

Weight (kDa)

9.27

Isoelectric Point (pI)

31.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1475
Acc36I ACCTGC 2 cut(s) 956, 1244
AccI GTMKAC 1 cut(s) 621
AccII CGCG 1 cut(s) 92
AciI CCGC 5 cut(s) 90, 92, 367, 1316, 1339
AclWI GGATC 1 cut(s) 1122
AcoI YGGCCR 4 cut(s) 27, 368, 1182, 1456
AcsI RAATTY 2 cut(s) 756, 1681
AcuI CTGAAG 1 cut(s) 183
AfaI GTAC 3 cut(s) 1375, 1400, 1715
AfiI CCNNNNNNNGG 2 cut(s) 445, 1745
AjnI CCWGG 1 cut(s) 153
AjuI GAANNNNNNNTTGG 4 cut(s) 64, 96, 181, 213
AluBI AGCT 9 cut(s) 192, 364, 648, 735, 1154, 1442, 1462, 1557, 1757
AluI AGCT 9 cut(s) 192, 364, 648, 735, 1154, 1442, 1462, 1557, 1757
Alw21I GWGCWC 2 cut(s) 1511, 1529
Alw26I GTCTC 1 cut(s) 1220
AlwI GGATC 1 cut(s) 1122
AlwNI CAGNNNCTG 2 cut(s) 648, 971
Ama87I CYCGRG 1 cut(s) 839
AoxI GGCC 8 cut(s) 27, 368, 651, 1050, 1182, 1246, 1285, 1456
ApeKI GCWGC 5 cut(s) 364, 392, 776, 1313, 1319
ApoI RAATTY 2 cut(s) 756, 1681
ArsI GACNNNNNNTTYG 2 cut(s) 166, 198
Asp700I GAANNNNTTC 1 cut(s) 664
AspLEI GCGC 1 cut(s) 547
AspS9I GGNCC 3 cut(s) 651, 1050, 1246
AsuHPI GGTGA 8 cut(s) 169, 1030, 1042, 1084, 1252, 1448, 1476, 1576
AvaI CYCGRG 1 cut(s) 839
BalI TGGCCA 2 cut(s) 1184, 1458
BbsI GAAGAC 1 cut(s) 1162
Bbv12I GWGCWC 2 cut(s) 1511, 1529
BbvCI CCTCAGC 2 cut(s) 1753, 1758
BbvI GCAGC 5 cut(s) 351, 379, 763, 1325, 1331
BccI CCATC 9 cut(s) 544, 595, 695, 1021, 1067, 1592, 1602, 1704, 1747
BciT130I CCWGG 1 cut(s) 155
BclI TGATCA 2 cut(s) 511, 1191
BcoDI GTCTC 1 cut(s) 1220
BfaI CTAG 5 cut(s) 104, 167, 251, 1463, 1538
BfmI CTRYAG 1 cut(s) 1268
BfuAI ACCTGC 2 cut(s) 956, 1244
BisI GCNGC 9 cut(s) 90, 93, 365, 368, 393, 777, 1314, 1317, 1320
BlsI GCNGC 9 cut(s) 91, 94, 366, 369, 394, 778, 1315, 1318, 1321
Bme1390I CCNGG 1 cut(s) 155
BmeT110I CYCGRG 1 cut(s) 839
BmgT120I GGNCC 3 cut(s) 651, 1050, 1246
BmiI GGNNCC 2 cut(s) 595, 1750
BmrFI CCNGG 1 cut(s) 155
BmsI GCATC 5 cut(s) 22, 786, 932, 1077, 1121
BpiI GAAGAC 1 cut(s) 1162
BplI GAGNNNNNCTC 2 cut(s) 246, 278
Bpu10I CCTNAGC 3 cut(s) 1523, 1753, 1758
BsaBI GATNNNNATC 1 cut(s) 885
BsaJI CCNNGG 5 cut(s) 90, 277, 840, 983, 1119
BsaWI WCCGGW 1 cut(s) 1586
Bsc4I CCNNNNNNNGG 2 cut(s) 445, 1745
Bse1I ACTGG 5 cut(s) 79, 478, 595, 859, 1459
Bse3DI GCAATG 1 cut(s) 294
Bse8I GATNNNNATC 1 cut(s) 885
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 5 cut(s) 90, 277, 840, 983, 1119
BseGI GGATG 4 cut(s) 230, 1112, 1613, 1739
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 2 cut(s) 445, 1745
BseMI GCAATG 1 cut(s) 294
BseMII CTCAG 5 cut(s) 1011, 1113, 1514, 1749, 1767
BseNI ACTGG 5 cut(s) 79, 478, 595, 859, 1459
BseRI GAGGAG 3 cut(s) 20, 1028, 1591
BseXI GCAGC 5 cut(s) 351, 379, 763, 1325, 1331
BseYI CCCAGC 2 cut(s) 648, 1150
Bsh1236I CGCG 1 cut(s) 92
BshFI GGCC 8 cut(s) 29, 370, 653, 1052, 1184, 1248, 1287, 1458
BsiHKAI GWGCWC 2 cut(s) 1511, 1529
BsiHKCI CYCGRG 1 cut(s) 839
BsiSI CCGG 1 cut(s) 1587
BslFI GGGAC 4 cut(s) 187, 484, 721, 729
BslI CCNNNNNNNGG 2 cut(s) 445, 1745
BsmAI GTCTC 1 cut(s) 1220
BsmBI CGTCTC 1 cut(s) 1220
BsmFI GGGAC 4 cut(s) 187, 484, 721, 729
BsnI GGCC 8 cut(s) 29, 370, 653, 1052, 1184, 1248, 1287, 1458
BsoBI CYCGRG 1 cut(s) 839
Bsp1286I GDGCHC 2 cut(s) 1511, 1529
Bsp143I GATC 4 cut(s) 511, 865, 1127, 1191
Bsp19I CCATGG 2 cut(s) 983, 1119
BspACI CCGC 5 cut(s) 90, 92, 367, 1316, 1339
BspANI GGCC 8 cut(s) 29, 370, 653, 1052, 1184, 1248, 1287, 1458
BspCNI CTCAG 5 cut(s) 1010, 1112, 1515, 1750, 1766
BspFNI CGCG 1 cut(s) 92
BspLI GGNNCC 2 cut(s) 595, 1750
BspMI ACCTGC 2 cut(s) 956, 1244
BspPI GGATC 1 cut(s) 1122
BsrDI GCAATG 1 cut(s) 294
BsrI ACTGG 5 cut(s) 79, 478, 595, 859, 1459
BssECI CCNNGG 5 cut(s) 90, 277, 840, 983, 1119
BssMI GATC 4 cut(s) 511, 865, 1127, 1191
BssT1I CCWWGG 3 cut(s) 277, 983, 1119
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 5 cut(s) 613, 1168, 1214, 1646, 1748
Bst6I CTCTTC 2 cut(s) 782, 1523
BstAPI GCANNNNNTGC 1 cut(s) 305
BstC8I GCNNGC 4 cut(s) 226, 1156, 1460, 1614
BstDEI CTNAG 5 cut(s) 997, 1099, 1523, 1753, 1758
BstDSI CCRYGG 3 cut(s) 90, 983, 1119
BstF5I GGATG 4 cut(s) 230, 1112, 1613, 1739
BstFNI CGCG 1 cut(s) 92
BstHHI GCGC 1 cut(s) 547
BstKTI GATC 4 cut(s) 514, 868, 1130, 1194
BstMAI GTCTC 1 cut(s) 1220
BstMBI GATC 4 cut(s) 511, 865, 1127, 1191
BstMWI GCNNNNNNNGC 5 cut(s) 305, 364, 551, 1319, 1609
BstNI CCWGG 1 cut(s) 155
BstSCI CCNGG 1 cut(s) 153
BstSFI CTRYAG 1 cut(s) 1268
BstUI CGCG 1 cut(s) 92
BstV1I GCAGC 5 cut(s) 351, 379, 763, 1325, 1331
BstV2I GAAGAC 1 cut(s) 1162
BstX2I RGATCY 1 cut(s) 1127
BstYI RGATCY 1 cut(s) 1127
BsuRI GGCC 8 cut(s) 29, 370, 653, 1052, 1184, 1248, 1287, 1458
BtgI CCRYGG 3 cut(s) 90, 983, 1119
BtsCI GGATG 4 cut(s) 230, 1112, 1613, 1739
BtsI GCAGTG 2 cut(s) 153, 387
BtsIMutI CAGTG 5 cut(s) 153, 387, 588, 1353, 1452
BveI ACCTGC 2 cut(s) 956, 1244
Cac8I GCNNGC 4 cut(s) 226, 1156, 1460, 1614
CaiI CAGNNNCTG 2 cut(s) 648, 971
CfoI GCGC 1 cut(s) 547
Cfr13I GGNCC 3 cut(s) 651, 1050, 1246
Cfr42I CCGCGG 1 cut(s) 93
CsiI ACCWGGT 1 cut(s) 153
Csp6I GTAC 3 cut(s) 1374, 1399, 1714
CviAII CATG 4 cut(s) 913, 984, 1063, 1120
CviQI GTAC 3 cut(s) 1374, 1399, 1714
DdeI CTNAG 5 cut(s) 997, 1099, 1523, 1753, 1758
DpnI GATC 4 cut(s) 513, 867, 1129, 1193
DpnII GATC 4 cut(s) 511, 865, 1127, 1191
EaeI YGGCCR 4 cut(s) 27, 368, 1182, 1456
Eam1104I CTCTTC 2 cut(s) 782, 1523
EarI CTCTTC 2 cut(s) 782, 1523
Eco130I CCWWGG 3 cut(s) 277, 983, 1119
Eco57I CTGAAG 1 cut(s) 183
Eco88I CYCGRG 1 cut(s) 839
EcoRII CCWGG 1 cut(s) 153
EcoT14I CCWWGG 3 cut(s) 277, 983, 1119
EcoT22I ATGCAT 1 cut(s) 183
ErhI CCWWGG 3 cut(s) 277, 983, 1119
Esp3I CGTCTC 1 cut(s) 1220
FaeI CATG 4 cut(s) 916, 987, 1066, 1123
FalI AAGNNNNNCTT 6 cut(s) 181, 213, 719, 751, 1596, 1628
FaqI GGGAC 4 cut(s) 187, 484, 721, 729
FatI CATG 4 cut(s) 912, 983, 1062, 1119
FbaI TGATCA 2 cut(s) 511, 1191
FblI GTMKAC 1 cut(s) 621
Fnu4HI GCNGC 9 cut(s) 90, 93, 365, 368, 393, 777, 1314, 1317, 1320
FokI GGATG 4 cut(s) 217, 1099, 1620, 1726
Fsp4HI GCNGC 9 cut(s) 90, 93, 365, 368, 393, 777, 1314, 1317, 1320
FspBI CTAG 5 cut(s) 104, 167, 251, 1463, 1538
GlaI GCGC 1 cut(s) 546
GluI GCNGC 9 cut(s) 90, 93, 365, 368, 393, 777, 1314, 1317, 1320
GsaI CCCAGC 2 cut(s) 652, 1154
HaeIII GGCC 8 cut(s) 29, 370, 653, 1052, 1184, 1248, 1287, 1458
HapII CCGG 1 cut(s) 1587
HhaI GCGC 1 cut(s) 547
Hin1II CATG 4 cut(s) 916, 987, 1066, 1123
Hin6I GCGC 1 cut(s) 545
HinP1I GCGC 1 cut(s) 545
HindIII AAGCTT 2 cut(s) 733, 1440
HinfI GANTC 4 cut(s) 269, 435, 944, 1515
HpaII CCGG 1 cut(s) 1587
HphI GGTGA 8 cut(s) 169, 1030, 1042, 1084, 1252, 1448, 1476, 1576
Hpy166II GTNNAC 5 cut(s) 151, 622, 640, 1399, 1584
Hpy188I TCNGA 2 cut(s) 978, 1044
Hpy188III TCNNGA 6 cut(s) 38, 69, 498, 839, 849, 1522
Hpy8I GTNNAC 5 cut(s) 151, 622, 640, 1399, 1584
Hpy99I CGWCG 1 cut(s) 815
HpyAV CCTTC 5 cut(s) 244, 283, 1105, 1237, 1629
HpyCH4III ACNGT 5 cut(s) 613, 1168, 1214, 1646, 1748
HpyCH4IV ACGT 1 cut(s) 813
HpyCH4V TGCA 9 cut(s) 181, 224, 299, 335, 408, 464, 1280, 1616, 1706
HpyF10VI GCNNNNNNNGC 5 cut(s) 305, 364, 551, 1319, 1609
HpyF3I CTNAG 5 cut(s) 997, 1099, 1523, 1753, 1758
HpySE526I ACGT 1 cut(s) 813
Hsp92II CATG 4 cut(s) 916, 987, 1066, 1123
HspAI GCGC 1 cut(s) 545
Ksp22I TGATCA 2 cut(s) 511, 1191
KspI CCGCGG 1 cut(s) 93
Kzo9I GATC 4 cut(s) 511, 865, 1127, 1191
Lsp1109I GCAGC 5 cut(s) 351, 379, 763, 1325, 1331
LweI GCATC 5 cut(s) 22, 786, 932, 1077, 1121
MabI ACCWGGT 1 cut(s) 153
MaeI CTAG 5 cut(s) 104, 167, 251, 1463, 1538
MaeII ACGT 1 cut(s) 813
MaeIII GTNAC 6 cut(s) 157, 211, 380, 607, 857, 1000
MalI GATC 4 cut(s) 513, 867, 1129, 1193
MboI GATC 4 cut(s) 511, 865, 1127, 1191
MboII GAAGA 8 cut(s) 553, 799, 950, 953, 1162, 1246, 1411, 1510
MfeI CAATTG 2 cut(s) 1281, 1569
MflI RGATCY 1 cut(s) 1127
MhlI GDGCHC 2 cut(s) 1511, 1529
MlsI TGGCCA 2 cut(s) 1184, 1458
MluNI TGGCCA 2 cut(s) 1184, 1458
MlyI GAGTC 1 cut(s) 1509
MmeI TCCRAC 1 cut(s) 1767
Mox20I TGGCCA 2 cut(s) 1184, 1458
Mph1103I ATGCAT 1 cut(s) 183
MroXI GAANNNNTTC 1 cut(s) 664
MscI TGGCCA 2 cut(s) 1184, 1458
MseI TTAA 3 cut(s) 1206, 1406, 1670
MslI CAYNNNNRTG 2 cut(s) 674, 692
Msp20I TGGCCA 2 cut(s) 1184, 1458
MspA1I CMGCKG 5 cut(s) 92, 364, 1154, 1316, 1757
MspI CCGG 1 cut(s) 1587
MspR9I CCNGG 1 cut(s) 155
MunI CAATTG 2 cut(s) 1281, 1569
MvaI CCWGG 1 cut(s) 155
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 5 cut(s) 305, 364, 551, 1319, 1609
NcoI CCATGG 2 cut(s) 983, 1119
NdeII GATC 4 cut(s) 511, 865, 1127, 1191
NlaIII CATG 4 cut(s) 916, 987, 1066, 1123
NlaIV GGNNCC 2 cut(s) 595, 1750
NmuCI GTSAC 5 cut(s) 157, 211, 380, 607, 857
NsiI ATGCAT 1 cut(s) 183
PdmI GAANNNNTTC 1 cut(s) 664
PfeI GAWTC 3 cut(s) 269, 435, 944
PkrI GCNGC 9 cut(s) 91, 94, 366, 369, 394, 778, 1315, 1318, 1321
PleI GAGTC 1 cut(s) 1509
PpsI GAGTC 1 cut(s) 1509
PsiI TTATAA 1 cut(s) 1475
Psp6I CCWGG 1 cut(s) 153
PspFI CCCAGC 2 cut(s) 648, 1150
PspGI CCWGG 1 cut(s) 153
PspN4I GGNNCC 2 cut(s) 595, 1750
PspPI GGNCC 3 cut(s) 651, 1050, 1246
PsrI GAACNNNNNNTAC 2 cut(s) 1357, 1389
PstNI CAGNNNCTG 2 cut(s) 648, 971
PsuI RGATCY 1 cut(s) 1127
PvuII CAGCTG 3 cut(s) 364, 1154, 1757
RsaI GTAC 3 cut(s) 1375, 1400, 1715
RsaNI GTAC 3 cut(s) 1374, 1399, 1714
RseI CAYNNNNRTG 2 cut(s) 674, 692
SacII CCGCGG 1 cut(s) 93
SaqAI TTAA 3 cut(s) 1206, 1406, 1670
SatI GCNGC 9 cut(s) 90, 93, 365, 368, 393, 777, 1314, 1317, 1320
Sau3AI GATC 4 cut(s) 511, 865, 1127, 1191
Sau96I GGNCC 3 cut(s) 651, 1050, 1246
SchI GAGTC 1 cut(s) 1509
ScrFI CCNGG 1 cut(s) 155
SduI GDGCHC 2 cut(s) 1511, 1529
SexAI ACCWGGT 1 cut(s) 153
SfaNI GCATC 5 cut(s) 22, 786, 932, 1077, 1121
SfcI CTRYAG 1 cut(s) 1268
Sfr303I CCGCGG 1 cut(s) 93
SgrBI CCGCGG 1 cut(s) 93
SmiMI CAYNNNNRTG 2 cut(s) 674, 692
SsiI CCGC 5 cut(s) 90, 92, 367, 1316, 1339
SspI AATATT 1 cut(s) 208
SspMI CTAG 5 cut(s) 104, 167, 251, 1463, 1538
StyD4I CCNGG 1 cut(s) 153
StyI CCWWGG 3 cut(s) 277, 983, 1119
TaaI ACNGT 5 cut(s) 613, 1168, 1214, 1646, 1748
TaiI ACGT 1 cut(s) 816
TaqI TCGA 1 cut(s) 810
TatI WGTACW 2 cut(s) 1373, 1398
TauI GCSGC 4 cut(s) 92, 95, 370, 1319
TfiI GAWTC 3 cut(s) 269, 435, 944
Tru1I TTAA 3 cut(s) 1206, 1406, 1670
Tru9I TTAA 3 cut(s) 1206, 1406, 1670
TscAI CASTG 5 cut(s) 153, 394, 595, 1353, 1459
TseFI GTSAC 5 cut(s) 157, 211, 380, 607, 857
TseI GCWGC 5 cut(s) 364, 392, 776, 1313, 1319
Tsp45I GTSAC 5 cut(s) 157, 211, 380, 607, 857
TspDTI ATGAA 8 cut(s) 537, 571, 670, 891, 901, 972, 1435, 1511
TspGWI ACGGA 1 cut(s) 863
TspRI CASTG 5 cut(s) 153, 394, 595, 1353, 1459
XapI RAATTY 2 cut(s) 756, 1681
XmiI GTMKAC 1 cut(s) 621
XmnI GAANNNNTTC 1 cut(s) 664
XspI CTAG 5 cut(s) 104, 167, 251, 1463, 1538
Zsp2I ATGCAT 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.