Rmu_sc0018661.1_g000001

Centromere kinetochore protein zw10 homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018661.1
Physical Location & Seq
Forward (+)
1 .. 3036
3036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018661.1_g000001.1.cds

Sequence Viewer

Length: 1305 bp
ggtcttcctcaccatttcaggcatttcttttctgagaaagtcttgtgtggggcagctgcaccacgtggcggtgcggctgtccaatctcagcaggagagtattttggagctcctcctctcgggggcccaggacctcagcgaccccaccacaccggatctccgcctcctcatccaacgcctcgacgcccactccctcaaaatcatgttcaaaatccaatcctacctcctctctcaccgccacgacttcgccgacctcttctcccgctgcaacgacgccgtttcccgctcccgtaaaatctccgacgacgtcgttcaggttctcgcctcctcactctccgaccgcccggtgatcggccagattatgaagcagatgagcgccgccacgaaagaggcgagggagaagcgggagcggctggagctggtgagggaaattctggaaatatgcgaaaaattgaaggctgctagagaggcggtgaggaatggacggctgagagttgcggctgagcaagtgagggagctgaagaaggctcttagggtttccgagcgggttgatgagagtgagcctgttgtttatagcttgttgaggaaggagtggtcagactgctttgatgaggtaaaatcaggctttttactgattcaagaggtgctgatgaggttcatggacaatgcggtgcgtttcgaatgcgaatctaatagaattcgagtcaagtatgtactgagcattgatgggaaccatgggattgagctcaagacagtgttacaagctttggatgtggttggcattttacactatggacttgctaaagtagctgacttgatgatcaagcatgtcatctctccagctctgaattctggatcgcctgtgtcctttgtaacagaaataaatccagactcacaagcaatgactcaggcgacactgaagattgtaccatcaaatgatcctaagatcgaaagaatggacggggagactatctatccaaggattattgaggttataaagtttattgacaagtacatttgctttcaagaaggttcttggactcgatgctttggaagattgacatggccaagaatatcggagttgattatttctaagtttctttccaaggttgtcccccaagatgcttcaaaacttgcagactttctaaagatcattaattgtacttctgaatttgagactgctttaagggagatgaagtttatttcagtatccgaaaacaaagataaccagttgagcagtttctctgaaaatgttgaggtttcactttgcatccaggaagaagacagaaatcttgggaagagctag

Protein Analysis

434

Amino Acids

49.17

Weight (kDa)

6.84

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 995
AatII GACGTC 1 cut(s) 309
AccBSI CCGCTC 3 cut(s) 285, 409, 544
AclWI GGATC 3 cut(s) 162, 862, 932
AcoI YGGCCR 2 cut(s) 352, 1064
AcsI RAATTY 4 cut(s) 429, 696, 847, 1169
AcuI CTGAAG 2 cut(s) 539, 938
AcvI CACGTG 1 cut(s) 65
AcyI GRCGYC 3 cut(s) 183, 273, 306
AdeI CACNNNGTG 1 cut(s) 65
AfaI GTAC 4 cut(s) 714, 927, 1013, 1162
AfiI CCNNNNNNNGG 4 cut(s) 68, 118, 121, 350
AgsI TTSAA 5 cut(s) 208, 454, 638, 1025, 1128
AjnI CCWGG 2 cut(s) 126, 1272
Alw21I GWGCWC 2 cut(s) 111, 747
Alw26I GTCTC 2 cut(s) 959, 1169
AlwI GGATC 3 cut(s) 162, 862, 932
Ama87I CYCGRG 1 cut(s) 118
AoxI GGCC 3 cut(s) 123, 352, 1064
ApaI GGGCCC 1 cut(s) 127
ApeKI GCWGC 4 cut(s) 53, 56, 264, 458
ApoI RAATTY 4 cut(s) 429, 696, 847, 1169
AseI ATTAAT 1 cut(s) 1155
AspLEI GCGC 1 cut(s) 377
AspS9I GGNCC 3 cut(s) 123, 124, 130
AsuC2I CCSGG 1 cut(s) 344
AsuHPI GGTGA 4 cut(s) 224, 358, 433, 484
AsuII TTCGAA 1 cut(s) 678
AvaI CYCGRG 1 cut(s) 118
AvaII GGWCC 1 cut(s) 130
BaeGI GKGCMC 1 cut(s) 127
BalI TGGCCA 1 cut(s) 1066
BanII GRGCYC 3 cut(s) 111, 127, 747
BbrPI CACGTG 1 cut(s) 65
BbsI GAAGAC 1 cut(s) 1287
Bbv12I GWGCWC 2 cut(s) 111, 747
BbvCI CCTCAGC 1 cut(s) 134
BbvI GCAGC 4 cut(s) 43, 65, 251, 445
BccI CCATC 2 cut(s) 719, 937
BceAI ACGGC 2 cut(s) 260, 500
BciT130I CCWGG 2 cut(s) 128, 1274
BciVI GTATCC 1 cut(s) 1219
BclI TGATCA 1 cut(s) 819
BcnI CCSGG 1 cut(s) 344
BcoDI GTCTC 2 cut(s) 959, 1169
BfaI CTAG 2 cut(s) 462, 1303
BfoI RGCGCY 1 cut(s) 378
BfuI GTATCC 1 cut(s) 1219
BisI GCNGC 8 cut(s) 54, 57, 75, 265, 378, 410, 459, 498
BlpI GCTNAGC 1 cut(s) 501
BlsI GCNGC 8 cut(s) 55, 58, 76, 266, 379, 411, 460, 499
Bme1390I CCNGG 3 cut(s) 128, 344, 1274
Bme18I GGWCC 1 cut(s) 130
BmeT110I CYCGRG 1 cut(s) 118
BmgT120I GGNCC 3 cut(s) 123, 124, 130
BmiI GGNNCC 3 cut(s) 124, 125, 731
BmrFI CCNGG 3 cut(s) 128, 344, 1274
BmsI GCATC 3 cut(s) 1034, 1111, 1278
BpiI GAAGAC 1 cut(s) 1287
BpmI CTGGAG 2 cut(s) 434, 822
Bpu10I CCTNAGC 1 cut(s) 134
Bpu1102I GCTNAGC 1 cut(s) 501
Bpu14I TTCGAA 1 cut(s) 678
BpuEI CTTGAG 1 cut(s) 731
BpuMI CCSGG 1 cut(s) 344
BsaAI YACGTR 1 cut(s) 65
BsaHI GRCGYC 3 cut(s) 183, 273, 306
BsaJI CCNNGG 4 cut(s) 126, 733, 977, 1104
BsaWI WCCGGW 1 cut(s) 151
BsaXI ACNNNNNCTCC 8 cut(s) 141, 171, 173, 203, 242, 272, 1181, 1211
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 118, 121, 350
Bse1I ACTGG 1 cut(s) 1228
Bse3DI GCAATG 1 cut(s) 906
BseBI CCWGG 2 cut(s) 128, 1274
BseDI CCNNGG 4 cut(s) 126, 733, 977, 1104
BseGI GGATG 3 cut(s) 168, 775, 1269
BseLI CCNNNNNNNGG 4 cut(s) 68, 118, 121, 350
BseMI GCAATG 1 cut(s) 906
BseMII CTCAG 7 cut(s) 24, 101, 148, 479, 492, 707, 920
BseNI ACTGG 1 cut(s) 1228
BseRI GAGGAG 5 cut(s) 101, 104, 155, 215, 316
BseSI GKGCMC 1 cut(s) 127
BseXI GCAGC 4 cut(s) 43, 65, 251, 445
BsgI GTGCAG 1 cut(s) 42
Bsh1285I CGRYCG 1 cut(s) 340
BshFI GGCC 3 cut(s) 125, 354, 1066
BsiEI CGRYCG 1 cut(s) 340
BsiHKAI GWGCWC 2 cut(s) 111, 747
BsiHKCI CYCGRG 1 cut(s) 118
BsiSI CCGG 2 cut(s) 152, 344
BslFI GGGAC 1 cut(s) 1097
BslI CCNNNNNNNGG 4 cut(s) 68, 118, 121, 350
BsmAI GTCTC 2 cut(s) 959, 1169
BsmFI GGGAC 1 cut(s) 1097
BsmI GAATGC 1 cut(s) 686
BsnI GGCC 3 cut(s) 125, 354, 1066
BsoBI CYCGRG 1 cut(s) 118
Bsp119I TTCGAA 1 cut(s) 678
Bsp120I GGGCCC 1 cut(s) 123
Bsp1286I GDGCHC 3 cut(s) 111, 127, 747
Bsp143I GATC 7 cut(s) 154, 348, 819, 854, 937, 945, 1149
Bsp1720I GCTNAGC 1 cut(s) 501
Bsp19I CCATGG 1 cut(s) 733
BspANI GGCC 3 cut(s) 125, 354, 1066
BspCNI CTCAG 7 cut(s) 25, 100, 147, 480, 493, 708, 919
BspLI GGNNCC 3 cut(s) 124, 125, 731
BspPI GGATC 3 cut(s) 162, 862, 932
BspQI GCTCTTC 1 cut(s) 1292
BspT104I TTCGAA 1 cut(s) 678
BsrBI CCGCTC 3 cut(s) 285, 409, 544
BsrDI GCAATG 1 cut(s) 906
BsrI ACTGG 1 cut(s) 1228
BssECI CCNNGG 4 cut(s) 126, 733, 977, 1104
BssMI GATC 7 cut(s) 154, 348, 819, 854, 937, 945, 1149
BssNI GRCGYC 3 cut(s) 183, 273, 306
BssT1I CCWWGG 3 cut(s) 733, 977, 1104
Bst2UI CCWGG 2 cut(s) 128, 1274
Bst4CI ACNGT 1 cut(s) 754
Bst6I CTCTTC 2 cut(s) 260, 1292
BstACI GRCGYC 3 cut(s) 183, 273, 306
BstBAI YACGTR 1 cut(s) 65
BstBI TTCGAA 1 cut(s) 678
BstDSI CCRYGG 1 cut(s) 733
BstF5I GGATG 3 cut(s) 168, 775, 1269
BstH2I RGCGCY 1 cut(s) 378
BstHHI GCGC 1 cut(s) 377
BstKTI GATC 7 cut(s) 157, 351, 822, 857, 940, 948, 1152
BstMAI GTCTC 2 cut(s) 959, 1169
BstMBI GATC 7 cut(s) 154, 348, 819, 854, 937, 945, 1149
BstMCI CGRYCG 1 cut(s) 340
BstMWI GCNNNNNNNGC 4 cut(s) 409, 415, 467, 806
BstNI CCWGG 2 cut(s) 128, 1274
BstNSI RCATGY 1 cut(s) 830
BstSCI CCNGG 3 cut(s) 126, 342, 1272
BstSLI GKGCMC 1 cut(s) 127
BstV1I GCAGC 4 cut(s) 43, 65, 251, 445
BstV2I GAAGAC 1 cut(s) 1287
BstX2I RGATCY 1 cut(s) 154
BstYI RGATCY 1 cut(s) 154
BsuI GTATCC 1 cut(s) 1219
BsuRI GGCC 3 cut(s) 125, 354, 1066
BtgI CCRYGG 1 cut(s) 733
BtsCI GGATG 3 cut(s) 168, 775, 1269
BtsIMutI CAGTG 2 cut(s) 759, 914
CfoI GCGC 1 cut(s) 377
Cfr13I GGNCC 3 cut(s) 123, 124, 130
CseI GACGC 2 cut(s) 191, 281
Csp6I GTAC 4 cut(s) 713, 926, 1012, 1161
CviAII CATG 5 cut(s) 202, 658, 734, 827, 1062
CviQI GTAC 4 cut(s) 713, 926, 1012, 1161
DpnI GATC 7 cut(s) 156, 350, 821, 856, 939, 947, 1151
DpnII GATC 7 cut(s) 154, 348, 819, 854, 937, 945, 1149
DraIII CACNNNGTG 1 cut(s) 65
EaeI YGGCCR 2 cut(s) 352, 1064
Eam1104I CTCTTC 2 cut(s) 260, 1292
EarI CTCTTC 2 cut(s) 260, 1292
EciI GGCGGA 1 cut(s) 149
Ecl136II GAGCTC 2 cut(s) 109, 745
Eco130I CCWWGG 3 cut(s) 733, 977, 1104
Eco24I GRGCYC 3 cut(s) 111, 127, 747
Eco47I GGWCC 1 cut(s) 130
Eco53kI GAGCTC 2 cut(s) 109, 745
Eco57I CTGAAG 2 cut(s) 539, 938
Eco72I CACGTG 1 cut(s) 65
Eco88I CYCGRG 1 cut(s) 118
EcoICRI GAGCTC 2 cut(s) 109, 745
EcoO109I RGGNCCY 2 cut(s) 123, 130
EcoRI GAATTC 2 cut(s) 696, 847
EcoRII CCWGG 2 cut(s) 126, 1272
EcoT14I CCWWGG 3 cut(s) 733, 977, 1104
EcoT38I GRGCYC 3 cut(s) 111, 127, 747
ErhI CCWWGG 3 cut(s) 733, 977, 1104
FaeI CATG 5 cut(s) 205, 661, 737, 830, 1065
FaqI GGGAC 1 cut(s) 1097
FatI CATG 5 cut(s) 201, 657, 733, 826, 1061
FauI CCCGC 4 cut(s) 269, 290, 396, 537
FbaI TGATCA 1 cut(s) 819
Fnu4HI GCNGC 8 cut(s) 54, 57, 75, 265, 378, 410, 459, 498
FokI GGATG 3 cut(s) 155, 782, 1256
FriOI GRGCYC 3 cut(s) 111, 127, 747
Fsp4HI GCNGC 8 cut(s) 54, 57, 75, 265, 378, 410, 459, 498
FspBI CTAG 2 cut(s) 462, 1303
GlaI GCGC 1 cut(s) 376
GluI GCNGC 8 cut(s) 54, 57, 75, 265, 378, 410, 459, 498
GsuI CTGGAG 2 cut(s) 434, 822
HaeII RGCGCY 1 cut(s) 378
HaeIII GGCC 3 cut(s) 125, 354, 1066
HapII CCGG 2 cut(s) 152, 344
HgaI GACGC 2 cut(s) 191, 281
HhaI GCGC 1 cut(s) 377
Hin1I GRCGYC 3 cut(s) 183, 273, 306
Hin1II CATG 5 cut(s) 205, 661, 737, 830, 1065
Hin6I GCGC 1 cut(s) 375
HinP1I GCGC 1 cut(s) 375
HindIII AAGCTT 1 cut(s) 762
HinfI GANTC 6 cut(s) 634, 686, 702, 890, 904, 1039
HpaII CCGG 2 cut(s) 152, 344
HphI GGTGA 4 cut(s) 224, 358, 433, 484
Hpy188III TCNNGA 6 cut(s) 434, 638, 748, 852, 887, 1025
Hpy99I CGWCG 5 cut(s) 185, 275, 305, 308, 311
HpyAV CCTTC 4 cut(s) 448, 517, 580, 1022
HpyCH4III ACNGT 1 cut(s) 754
HpyCH4IV ACGT 2 cut(s) 64, 306
HpyCH4V TGCA 4 cut(s) 59, 267, 1136, 1269
HpyF10VI GCNNNNNNNGC 4 cut(s) 409, 415, 467, 806
HpySE526I ACGT 2 cut(s) 64, 306
Hsp92I GRCGYC 3 cut(s) 183, 273, 306
Hsp92II CATG 5 cut(s) 205, 661, 737, 830, 1065
HspAI GCGC 1 cut(s) 375
Ksp22I TGATCA 1 cut(s) 819
Kzo9I GATC 7 cut(s) 154, 348, 819, 854, 937, 945, 1149
LguI GCTCTTC 1 cut(s) 1292
LmnI GCTCC 6 cut(s) 106, 114, 290, 406, 415, 514
Lsp1109I GCAGC 4 cut(s) 43, 65, 251, 445
LweI GCATC 3 cut(s) 1034, 1111, 1278
MaeI CTAG 2 cut(s) 462, 1303
MaeII ACGT 2 cut(s) 64, 306
MaeIII GTNAC 2 cut(s) 756, 871
MalI GATC 7 cut(s) 156, 350, 821, 856, 939, 947, 1151
MbiI CCGCTC 3 cut(s) 285, 409, 544
MboI GATC 7 cut(s) 154, 348, 819, 854, 937, 945, 1149
MboII GAAGA 6 cut(s) 247, 532, 931, 1065, 1289, 1292
MflI RGATCY 1 cut(s) 154
MhlI GDGCHC 3 cut(s) 111, 127, 747
MlsI TGGCCA 1 cut(s) 1066
MluCI AATT 6 cut(s) 429, 449, 696, 847, 1156, 1169
MluNI TGGCCA 1 cut(s) 1066
MlyI GAGTC 4 cut(s) 711, 884, 898, 1033
MmeI TCCRAC 3 cut(s) 196, 324, 360
Mox20I TGGCCA 1 cut(s) 1066
MscI TGGCCA 1 cut(s) 1066
MseI TTAA 2 cut(s) 1155, 1184
Msp20I TGGCCA 1 cut(s) 1066
MspA1I CMGCKG 2 cut(s) 56, 264
MspI CCGG 2 cut(s) 152, 344
MspR9I CCNGG 3 cut(s) 128, 344, 1274
Mva1269I GAATGC 1 cut(s) 686
MvaI CCWGG 2 cut(s) 128, 1274
MwoI GCNNNNNNNGC 4 cut(s) 409, 415, 467, 806
NciI CCSGG 1 cut(s) 344
NcoI CCATGG 1 cut(s) 733
NdeII GATC 7 cut(s) 154, 348, 819, 854, 937, 945, 1149
NlaIII CATG 5 cut(s) 205, 661, 737, 830, 1065
NlaIV GGNNCC 3 cut(s) 124, 125, 731
NspI RCATGY 1 cut(s) 830
NspV TTCGAA 1 cut(s) 678
PciSI GCTCTTC 1 cut(s) 1292
PcsI WCGNNNNNNNCGW 2 cut(s) 246, 389
PctI GAATGC 1 cut(s) 686
PfeI GAWTC 2 cut(s) 634, 686
PflFI GACNNNGTC 1 cut(s) 305
PfoI TCCNGGA 1 cut(s) 1272
PkrI GCNGC 8 cut(s) 55, 58, 76, 266, 379, 411, 460, 499
PleI GAGTC 4 cut(s) 710, 884, 898, 1033
PmaCI CACGTG 1 cut(s) 65
PmlI CACGTG 1 cut(s) 65
PpsI GAGTC 4 cut(s) 710, 884, 898, 1033
Ppu21I YACGTR 1 cut(s) 65
PpuMI RGGWCCY 1 cut(s) 130
PshBI ATTAAT 1 cut(s) 1155
PsiI TTATAA 1 cut(s) 995
Psp124BI GAGCTC 2 cut(s) 111, 747
Psp5II RGGWCCY 1 cut(s) 130
Psp6I CCWGG 2 cut(s) 126, 1272
PspCI CACGTG 1 cut(s) 65
PspGI CCWGG 2 cut(s) 126, 1272
PspN4I GGNNCC 3 cut(s) 124, 125, 731
PspOMI GGGCCC 1 cut(s) 123
PspPI GGNCC 3 cut(s) 123, 124, 130
PspPPI RGGWCCY 1 cut(s) 130
PsuI RGATCY 1 cut(s) 154
PsyI GACNNNGTC 1 cut(s) 305
PvuII CAGCTG 1 cut(s) 56
RsaI GTAC 4 cut(s) 714, 927, 1013, 1162
RsaNI GTAC 4 cut(s) 713, 926, 1012, 1161
SacI GAGCTC 2 cut(s) 111, 747
SapI GCTCTTC 1 cut(s) 1292
SaqAI TTAA 2 cut(s) 1155, 1184
SatI GCNGC 8 cut(s) 54, 57, 75, 265, 378, 410, 459, 498
Sau3AI GATC 7 cut(s) 154, 348, 819, 854, 937, 945, 1149
Sau96I GGNCC 3 cut(s) 123, 124, 130
SchI GAGTC 4 cut(s) 711, 884, 898, 1033
ScrFI CCNGG 3 cut(s) 128, 344, 1274
SduI GDGCHC 3 cut(s) 111, 127, 747
SfaNI GCATC 3 cut(s) 1034, 1111, 1278
SfuI TTCGAA 1 cut(s) 678
SinI GGWCC 1 cut(s) 130
SmlI CTYRAG 1 cut(s) 746
SmoI CTYRAG 1 cut(s) 746
Sse9I AATT 6 cut(s) 429, 449, 696, 847, 1156, 1169
SspMI CTAG 2 cut(s) 462, 1303
SstI GAGCTC 2 cut(s) 111, 747
StyD4I CCNGG 3 cut(s) 126, 342, 1272
StyI CCWWGG 3 cut(s) 733, 977, 1104
TaaI ACNGT 1 cut(s) 754
TaiI ACGT 2 cut(s) 67, 309
TaqI TCGA 5 cut(s) 180, 678, 700, 948, 1042
TasI AATT 6 cut(s) 429, 449, 696, 847, 1156, 1169
TatI WGTACW 3 cut(s) 712, 1011, 1160
TauI GCSGC 4 cut(s) 77, 380, 412, 500
TfiI GAWTC 2 cut(s) 634, 686
Tru1I TTAA 2 cut(s) 1155, 1184
Tru9I TTAA 2 cut(s) 1155, 1184
TscAI CASTG 2 cut(s) 759, 921
TseI GCWGC 4 cut(s) 53, 56, 264, 458
TspDTI ATGAA 3 cut(s) 377, 646, 1208
TspRI CASTG 2 cut(s) 759, 921
Tth111I GACNNNGTC 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 130
VspI ATTAAT 1 cut(s) 1155
XapI RAATTY 4 cut(s) 429, 696, 847, 1169
XceI RCATGY 1 cut(s) 830
XspI CTAG 2 cut(s) 462, 1303
ZraI GACGTC 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.