Rh1CG167700

Centromere kinetochore protein zw10 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
36721599 .. 36725587
3989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG167700.1

Sequence Viewer

Length: 1467 bp
ATGATCAAGCATGTCATCTCTCCAGCTCTGAATTCTGGATCGCCTGTGTCCTTTGTAACAGAAATAAATCCAGACTCACAAGCAATGACTGAGGCAATACTGAAGATTGTACCATCAAATGATCCTAAGATCGAAAGAATGGACGGGGAGACTATCTATCCAAGGATTATTGAGGTTATAAAGTTTATTGACAAGTACATTTGCTTTCAAGAGGGTTCTTGGACTCGATGCTTTGGAAGATTGACATGGCCAAGAATATCAGAGTTGATTATTTCTAAGTTTCTTTCCAAGGTTGTCCCCCAAGATGCTTCAAAACTTGCAGACTTTCTAAAGATCATTAATTATAACCAGTTGAGCAGTTTCGCTGAAAATGTTGAGGTTCACTTTGCATCCAGGAAGAAGACAGAAATCTTGGGAAGAGCTAGGAATTTGCTTCTTCAATGTGATTTTGCTATTTCTCAAGAGAATACAAGGAGGAAAGGTAAGCACGATGGGGCTGCTAGCAATACTCCAGAAGATGTTGACTTGCTATTTGTTTCGGAGCGGTGTGTGGTGTCCAAAGCAGCAATTCAATCAATGAAGTTAGTGCACGAGACACGTAAGGATGTCTGCTTGTCATCCCCTAGAGTTGCATTGGAATTTTATCGTGCTGTTAGGGATGTACTACTTTTATATGAAGTTGTCATACCTGTCAAGCTGGAACGGCAGCTTGATGGCATCAACCAGGTTGCTGTTCTCATGCACAACGATTGCCTTTATCTATCTCAGGAGATTCTTGGGCTTGCATTTGAGTATCGCTCAGACTTTCCAACTTCAATGAAAGATCATGCTGTGTTTGTTGATATGGCTCCAAGATTTCATCTCATGGCAGAGGAAATACTGCAGAGACAAATCCAACTTGTGATTCATAGCTTGAGAGAGGCTCTAGATGGCGCTGATGGATTCCAAAATATCCATCAAATGCAACAATTCCAATCTGCAAAATTTAGTATAGATCAGGTTGTTTTCATACTGGAGAAAGTACACATTATATGGGAGCCACTCTTATTGCCTTCAACTTACAAGAGAAGCATGTGTATGGTTCTCGAGTCAGTTTTTTCTAGAATCACAAAAGACATACTCCATTTAGATGATATGGCAGCAGAAGAAACATTAGAGCTTCAAATACTGATTCACTTGATGCTGGAAAACTTAACTTCTTTGTTGGGGTCCCTGGCTGCTCTTCAAGTTGAGAAGTCACAAGAGGGCATGACATCTCTTGATGATCTTATACCATCATTACGAAAACTTAGGAAATTGGCAGAATTATTAGATATGCCCTTGAAAACAATCACTGCAGCTTGGGAAACCGGAGAACTGCGAAATGGTGGCTTTACATCATCAGAGGTAGAAGATTTCATCAAAGCAATTTTTCAAGACTCACCTTTGCGGAAAGACTGCTTATGGAGGGTACATGGCAACTTTTAA

Protein Analysis

488

Amino Acids

55.62

Weight (kDa)

5.78

Isoelectric Point (pI)

46.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zw10_middle PF20665 1 - 114 6.1e-17 Centromere/kinetochore protein zw10, middle domain
ZW10_C PF20666 178 - 307 2.1e-39 Centromere/kinetochore protein zw10, C-terminal
ZW10_C2 PF22766 330 - 484 6e-41 ZW10 C-terminal helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 179, 345
AccBSI CCGCTC 1 cut(s) 544
AciI CCGC 2 cut(s) 544, 1429
AclWI GGATC 2 cut(s) 46, 116
AcoI YGGCCR 1 cut(s) 248
AcsI RAATTY 4 cut(s) 31, 427, 638, 983
AcuI CTGAAG 1 cut(s) 122
AfaI GTAC 5 cut(s) 111, 197, 663, 1023, 1452
AflIII ACRYGT 1 cut(s) 596
AjnI CCWGG 3 cut(s) 392, 723, 1212
AjuI GAANNNNNNNTTGG 2 cut(s) 888, 920
AluBI AGCT 7 cut(s) 26, 422, 697, 709, 912, 1159, 1340
AluI AGCT 7 cut(s) 26, 422, 697, 709, 912, 1159, 1340
Alw21I GWGCWC 1 cut(s) 591
Alw26I GTCTC 3 cut(s) 143, 587, 880
Alw44I GTGCAC 1 cut(s) 587
AlwI GGATC 2 cut(s) 46, 116
Ama87I CYCGRG 1 cut(s) 1085
AoxI GGCC 1 cut(s) 248
ApaLI GTGCAC 1 cut(s) 587
ApeKI GCWGC 6 cut(s) 497, 563, 706, 1139, 1217, 1337
ApoI RAATTY 4 cut(s) 31, 427, 638, 983
ArsI GACNNNNNNTTYG 2 cut(s) 515, 547
AseI ATTAAT 1 cut(s) 339
AspLEI GCGC 1 cut(s) 935
AspS9I GGNCC 1 cut(s) 1209
AsuHPI GGTGA 1 cut(s) 1413
AsuNHI GCTAGC 1 cut(s) 500
AvaI CYCGRG 1 cut(s) 1085
AvaII GGWCC 1 cut(s) 1209
BaeGI GKGCMC 1 cut(s) 591
BalI TGGCCA 1 cut(s) 250
BarI GAAGNNNNNNTAC 2 cut(s) 669, 701
BauI CACGAG 1 cut(s) 590
BbsI GAAGAC 1 cut(s) 407
Bbv12I GWGCWC 1 cut(s) 591
BbvI GCAGC 6 cut(s) 484, 575, 718, 1151, 1204, 1349
BccI CCATC 7 cut(s) 121, 485, 707, 923, 932, 963, 1282
BceAI ACGGC 1 cut(s) 719
BcgI CGANNNNNNTGC 2 cut(s) 479, 513
BciT130I CCWGG 3 cut(s) 394, 725, 1214
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 3 cut(s) 143, 587, 880
BfaI CTAG 5 cut(s) 423, 501, 624, 926, 1101
BfmI CTRYAG 2 cut(s) 881, 1335
BfoI RGCGCY 1 cut(s) 936
BisI GCNGC 6 cut(s) 498, 564, 707, 1140, 1218, 1338
BlsI GCNGC 6 cut(s) 499, 565, 708, 1141, 1219, 1339
Bme1390I CCNGG 3 cut(s) 394, 725, 1214
Bme18I GGWCC 1 cut(s) 1209
BmeT110I CYCGRG 1 cut(s) 1085
BmgT120I GGNCC 1 cut(s) 1209
BmiI GGNNCC 4 cut(s) 849, 1038, 1210, 1211
BmrFI CCNGG 3 cut(s) 394, 725, 1214
BmsI GCATC 5 cut(s) 218, 295, 398, 726, 1170
BmtI GCTAGC 1 cut(s) 504
BpiI GAAGAC 1 cut(s) 407
BplI GAGNNNNNCTC 4 cut(s) 782, 814, 907, 939
BpmI CTGGAG 3 cut(s) 6, 495, 1034
BpuEI CTTGAG 2 cut(s) 444, 934
BsaAI YACGTR 1 cut(s) 599
BsaJI CCNNGG 3 cut(s) 161, 288, 1212
BsaWI WCCGGW 1 cut(s) 1349
BsaXI ACNNNNNCTCC 2 cut(s) 466, 496
Bse1I ACTGG 2 cut(s) 349, 1017
Bse3DI GCAATG 1 cut(s) 90
BseBI CCWGG 3 cut(s) 394, 725, 1214
BseDI CCNNGG 3 cut(s) 161, 288, 1212
BseGI GGATG 4 cut(s) 389, 610, 617, 664
BseMI GCAATG 1 cut(s) 90
BseMII CTCAG 3 cut(s) 81, 779, 813
BseNI ACTGG 2 cut(s) 349, 1017
BseSI GKGCMC 1 cut(s) 591
BseXI GCAGC 6 cut(s) 484, 575, 718, 1151, 1204, 1349
BshFI GGCC 1 cut(s) 250
BsiHKAI GWGCWC 1 cut(s) 591
BsiHKCI CYCGRG 1 cut(s) 1085
BsiSI CCGG 1 cut(s) 1350
BslFI GGGAC 2 cut(s) 281, 1195
BsmAI GTCTC 3 cut(s) 143, 587, 880
BsmFI GGGAC 2 cut(s) 281, 1195
BsnI GGCC 1 cut(s) 250
BsoBI CYCGRG 1 cut(s) 1085
Bsp1286I GDGCHC 1 cut(s) 591
Bsp143I GATC 8 cut(s) 3, 38, 121, 129, 333, 823, 994, 1264
BspACI CCGC 2 cut(s) 544, 1429
BspANI GGCC 1 cut(s) 250
BspCNI CTCAG 3 cut(s) 82, 778, 812
BspLI GGNNCC 4 cut(s) 849, 1038, 1210, 1211
BspMAI CTGCAG 2 cut(s) 885, 1339
BspOI GCTAGC 1 cut(s) 504
BspPI GGATC 2 cut(s) 46, 116
BspQI GCTCTTC 2 cut(s) 412, 1227
BsrBI CCGCTC 1 cut(s) 544
BsrDI GCAATG 1 cut(s) 90
BsrI ACTGG 2 cut(s) 349, 1017
BssECI CCNNGG 3 cut(s) 161, 288, 1212
BssMI GATC 8 cut(s) 3, 38, 121, 129, 333, 823, 994, 1264
BssSI CACGAG 1 cut(s) 590
BssT1I CCWWGG 2 cut(s) 161, 288
Bst2BI CACGAG 1 cut(s) 590
Bst2UI CCWGG 3 cut(s) 394, 725, 1214
Bst6I CTCTTC 2 cut(s) 412, 1227
BstBAI YACGTR 1 cut(s) 599
BstC8I GCNNGC 2 cut(s) 502, 783
BstDEI CTNAG 6 cut(s) 90, 126, 276, 765, 799, 1289
BstF5I GGATG 4 cut(s) 389, 610, 617, 664
BstH2I RGCGCY 1 cut(s) 936
BstHHI GCGC 1 cut(s) 935
BstKTI GATC 8 cut(s) 6, 41, 124, 132, 336, 826, 997, 1267
BstMAI GTCTC 3 cut(s) 143, 587, 880
BstMBI GATC 8 cut(s) 3, 38, 121, 129, 333, 823, 994, 1264
BstMWI GCNNNNNNNGC 1 cut(s) 703
BstNI CCWGG 3 cut(s) 394, 725, 1214
BstNSI RCATGY 2 cut(s) 14, 1075
BstSCI CCNGG 3 cut(s) 392, 723, 1212
BstSFI CTRYAG 2 cut(s) 881, 1335
BstSLI GKGCMC 1 cut(s) 591
BstV1I GCAGC 6 cut(s) 484, 575, 718, 1151, 1204, 1349
BstV2I GAAGAC 1 cut(s) 407
BsuRI GGCC 1 cut(s) 250
BtsCI GGATG 4 cut(s) 389, 610, 617, 664
BtsI GCAGTG 1 cut(s) 1332
BtsIMutI CAGTG 1 cut(s) 1332
Cac8I GCNNGC 2 cut(s) 502, 783
CfoI GCGC 1 cut(s) 935
Cfr13I GGNCC 1 cut(s) 1209
CsiI ACCWGGT 1 cut(s) 723
Csp6I GTAC 5 cut(s) 110, 196, 662, 1022, 1451
CspCI CAANNNNNGTGG 2 cut(s) 1029, 1064
CviAII CATG 8 cut(s) 11, 246, 739, 827, 865, 1072, 1249, 1454
CviQI GTAC 5 cut(s) 110, 196, 662, 1022, 1451
DdeI CTNAG 6 cut(s) 90, 126, 276, 765, 799, 1289
DpnI GATC 8 cut(s) 5, 40, 123, 131, 335, 825, 996, 1266
DpnII GATC 8 cut(s) 3, 38, 121, 129, 333, 823, 994, 1264
EaeI YGGCCR 1 cut(s) 248
Eam1104I CTCTTC 2 cut(s) 412, 1227
EarI CTCTTC 2 cut(s) 412, 1227
Eco130I CCWWGG 2 cut(s) 161, 288
Eco47I GGWCC 1 cut(s) 1209
Eco57I CTGAAG 1 cut(s) 122
Eco88I CYCGRG 1 cut(s) 1085
EcoO109I RGGNCCY 1 cut(s) 1209
EcoRI GAATTC 1 cut(s) 31
EcoRII CCWGG 3 cut(s) 392, 723, 1212
EcoT14I CCWWGG 2 cut(s) 161, 288
ErhI CCWWGG 2 cut(s) 161, 288
FaeI CATG 8 cut(s) 14, 249, 742, 830, 868, 1075, 1252, 1457
FaqI GGGAC 2 cut(s) 281, 1195
FatI CATG 8 cut(s) 10, 245, 738, 826, 864, 1071, 1248, 1453
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 6 cut(s) 498, 564, 707, 1140, 1218, 1338
FokI GGATG 4 cut(s) 376, 604, 617, 671
Fsp4HI GCNGC 6 cut(s) 498, 564, 707, 1140, 1218, 1338
FspBI CTAG 5 cut(s) 423, 501, 624, 926, 1101
GlaI GCGC 1 cut(s) 934
GluI GCNGC 6 cut(s) 498, 564, 707, 1140, 1218, 1338
GsuI CTGGAG 3 cut(s) 6, 495, 1034
HaeII RGCGCY 1 cut(s) 936
HaeIII GGCC 1 cut(s) 250
HapII CCGG 1 cut(s) 1350
HhaI GCGC 1 cut(s) 935
Hin1II CATG 8 cut(s) 14, 249, 742, 830, 868, 1075, 1252, 1457
Hin6I GCGC 1 cut(s) 933
HinP1I GCGC 1 cut(s) 933
HincII GTYRAC 1 cut(s) 523
HindII GTYRAC 1 cut(s) 523
HinfI GANTC 9 cut(s) 74, 223, 772, 904, 942, 1088, 1104, 1171, 1418
HpaII CCGG 1 cut(s) 1350
HphI GGTGA 1 cut(s) 1413
Hpy166II GTNNAC 4 cut(s) 382, 523, 589, 1024
Hpy188I TCNGA 5 cut(s) 30, 262, 541, 802, 1384
Hpy8I GTNNAC 4 cut(s) 382, 523, 589, 1024
HpyAV CCTTC 1 cut(s) 1062
HpyCH4IV ACGT 1 cut(s) 598
HpyF10VI GCNNNNNNNGC 1 cut(s) 703
HpyF3I CTNAG 6 cut(s) 90, 126, 276, 765, 799, 1289
HpySE526I ACGT 1 cut(s) 598
Hsp92II CATG 8 cut(s) 14, 249, 742, 830, 868, 1075, 1252, 1457
HspAI GCGC 1 cut(s) 933
KflI GGGWCCC 1 cut(s) 1209
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 8 cut(s) 3, 38, 121, 129, 333, 823, 994, 1264
LguI GCTCTTC 2 cut(s) 412, 1227
LmnI GCTCC 3 cut(s) 541, 853, 1036
Lsp1109I GCAGC 6 cut(s) 484, 575, 718, 1151, 1204, 1349
LweI GCATC 5 cut(s) 218, 295, 398, 726, 1170
MabI ACCWGGT 1 cut(s) 723
MaeI CTAG 5 cut(s) 423, 501, 624, 926, 1101
MaeII ACGT 1 cut(s) 598
MaeIII GTNAC 2 cut(s) 55, 1236
MalI GATC 8 cut(s) 5, 40, 123, 131, 335, 825, 996, 1266
MbiI CCGCTC 1 cut(s) 544
MboI GATC 8 cut(s) 3, 38, 121, 129, 333, 823, 994, 1264
MhlI GDGCHC 1 cut(s) 591
MlsI TGGCCA 1 cut(s) 250
MluNI TGGCCA 1 cut(s) 250
MlyI GAGTC 4 cut(s) 68, 217, 1097, 1412
MmeI TCCRAC 2 cut(s) 833, 919
Mox20I TGGCCA 1 cut(s) 250
MscI TGGCCA 1 cut(s) 250
MseI TTAA 3 cut(s) 339, 1193, 1465
MslI CAYNNNNRTG 2 cut(s) 1076, 1128
Msp20I TGGCCA 1 cut(s) 250
MspI CCGG 1 cut(s) 1350
MspR9I CCNGG 3 cut(s) 394, 725, 1214
MvaI CCWGG 3 cut(s) 394, 725, 1214
MwoI GCNNNNNNNGC 1 cut(s) 703
NdeII GATC 8 cut(s) 3, 38, 121, 129, 333, 823, 994, 1264
NheI GCTAGC 1 cut(s) 500
NlaIII CATG 8 cut(s) 14, 249, 742, 830, 868, 1075, 1252, 1457
NlaIV GGNNCC 4 cut(s) 849, 1038, 1210, 1211
NmuCI GTSAC 1 cut(s) 1236
NspI RCATGY 2 cut(s) 14, 1075
PaeR7I CTCGAG 1 cut(s) 1085
PciSI GCTCTTC 2 cut(s) 412, 1227
PfeI GAWTC 5 cut(s) 772, 904, 942, 1104, 1171
PfoI TCCNGGA 1 cut(s) 392
PkrI GCNGC 6 cut(s) 499, 565, 708, 1141, 1219, 1339
PleI GAGTC 4 cut(s) 68, 217, 1096, 1412
PpsI GAGTC 4 cut(s) 68, 217, 1096, 1412
Ppu21I YACGTR 1 cut(s) 599
PpuMI RGGWCCY 1 cut(s) 1209
PshBI ATTAAT 1 cut(s) 339
PsiI TTATAA 2 cut(s) 179, 345
Psp5II RGGWCCY 1 cut(s) 1209
Psp6I CCWGG 3 cut(s) 392, 723, 1212
PspGI CCWGG 3 cut(s) 392, 723, 1212
PspN4I GGNNCC 4 cut(s) 849, 1038, 1210, 1211
PspPI GGNCC 1 cut(s) 1209
PspPPI RGGWCCY 1 cut(s) 1209
PstI CTGCAG 2 cut(s) 885, 1339
RsaI GTAC 5 cut(s) 111, 197, 663, 1023, 1452
RsaNI GTAC 5 cut(s) 110, 196, 662, 1022, 1451
RseI CAYNNNNRTG 2 cut(s) 1076, 1128
SapI GCTCTTC 2 cut(s) 412, 1227
SaqAI TTAA 3 cut(s) 339, 1193, 1465
SatI GCNGC 6 cut(s) 498, 564, 707, 1140, 1218, 1338
Sau3AI GATC 8 cut(s) 3, 38, 121, 129, 333, 823, 994, 1264
Sau96I GGNCC 1 cut(s) 1209
SchI GAGTC 4 cut(s) 68, 217, 1097, 1412
ScrFI CCNGG 3 cut(s) 394, 725, 1214
SduI GDGCHC 1 cut(s) 591
SexAI ACCWGGT 1 cut(s) 723
SfaNI GCATC 5 cut(s) 218, 295, 398, 726, 1170
SfcI CTRYAG 2 cut(s) 881, 1335
Sfr274I CTCGAG 1 cut(s) 1085
SinI GGWCC 1 cut(s) 1209
SlaI CTCGAG 1 cut(s) 1085
SmiMI CAYNNNNRTG 2 cut(s) 1076, 1128
SmlI CTYRAG 3 cut(s) 459, 913, 1085
SmoI CTYRAG 3 cut(s) 459, 913, 1085
SsiI CCGC 2 cut(s) 544, 1429
SspMI CTAG 5 cut(s) 423, 501, 624, 926, 1101
StyD4I CCNGG 3 cut(s) 392, 723, 1212
StyI CCWWGG 2 cut(s) 161, 288
TaiI ACGT 1 cut(s) 601
TaqI TCGA 3 cut(s) 132, 226, 1086
TatI WGTACW 3 cut(s) 195, 661, 1021
TfiI GAWTC 5 cut(s) 772, 904, 942, 1104, 1171
Tru1I TTAA 3 cut(s) 339, 1193, 1465
Tru9I TTAA 3 cut(s) 339, 1193, 1465
TscAI CASTG 1 cut(s) 1339
TseFI GTSAC 1 cut(s) 1236
TseI GCWGC 6 cut(s) 497, 563, 706, 1139, 1217, 1337
Tsp45I GTSAC 1 cut(s) 1236
TspDTI ATGAA 7 cut(s) 593, 690, 833, 848, 896, 997, 1387
TspRI CASTG 1 cut(s) 1339
VneI GTGCAC 1 cut(s) 587
VpaK11BI GGWCC 1 cut(s) 1209
VspI ATTAAT 1 cut(s) 339
XapI RAATTY 4 cut(s) 31, 427, 638, 983
XbaI TCTAGA 2 cut(s) 925, 1100
XceI RCATGY 2 cut(s) 14, 1075
XhoI CTCGAG 1 cut(s) 1085
XspI CTAG 5 cut(s) 423, 501, 624, 926, 1101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.